RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 CUTAO60888 179 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 PRPF40AO75400 957 aaKnown RBP14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 TOP3BO95985 862 aaKnown RBP14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 CEBPBP17676 345 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 MCM4P33991 863 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 ELAVL2Q12926 359 aaKnown RBP14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 GRIK3Q13003 919 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 RAB33AQ14088 237 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 PDIA5Q14554 519 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 HSP90AA2PQ14568 343 aaPredicted RBP14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 UGCGQ16739 394 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 SLC5A9Q2M3M2 681 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 FAM78AQ5JUQ0 283 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 ADALQ6DHV7 355 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 PROSER1Q86XN7 944 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 C4orf32Q8N8J7 132 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 LNX1Q8TBB1 728 aaPredicted RBP14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 ZFP42Q96MM3 310 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 MTMR9Q96QG7 549 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 CEP89Q96ST8 783 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 RIT2Q99578 217 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 SMOC1Q9H4F8 434 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 KCNMB3Q9NPA1 279 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 COL4A3BPQ9Y5P4 624 aa14.87□□□□□ -0.03
RAPGEF1-204ENST00000414781 NAV2Q8IVL1 2488 aa14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 ZNF197O14709 1029 aa14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 SLC37A4O43826 429 aa14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 PTPN2P17706 415 aa14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 MARCKSP29966 332 aaPredicted RBP14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 AXLP30530 894 aa14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 LONP1P36776 959 aaKnown RBP14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 TXKP42681 527 aa14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 TCEAL6Q6IPX3 200 aa14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 Q6ZS52 159 aa14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 POTEDQ86YR6 584 aa14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 KSR1Q8IVT5 923 aa14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 RDM1Q8NG50 284 aa14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 CSGALNACT1Q8TDX6 532 aa14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 SMARCD2Q92925 531 aa14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 TCEAL3Q969E4 200 aa14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 AK8Q96MA6 479 aa14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 ASB16Q96NS5 453 aa14.86□□□□□ -0.03
RAPGEF1-204ENST00000414781 SDK1Q7Z5N4 2213 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 DOCK6Q96HP0 2047 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 A0A1W2PQ27 194 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 A0A1W2PQ64 194 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 A0A1W2PQD8 194 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 WNT7AO00755 349 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 MSH4O15457 936 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 ERLIN2O94905 339 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 FXR2P51116 673 aaKnown RBP eCLIP14.85□□□□□ -0.036e-6■■■■□ 25.8
RAPGEF1-204ENST00000414781 UBE2HP62256 183 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 SPIRE1Q08AE8 756 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 NCBP1Q09161 790 aaKnown RBP14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 ELF2Q15723 593 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 FAM171A1Q5VUB5 890 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 NOTUMQ6P988 496 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 VITQ6UXI7 678 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 EXOC8Q8IYI6 725 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 ETNPPLQ8TBG4 499 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 FAM200AQ8TCP9 573 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 SLC5A5Q92911 643 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 E2F7Q96AV8 911 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 LENG9Q96B70 501 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 TMEM60Q9H2L4 133 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 RNF39Q9H2S5 420 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 TTC12Q9H892 705 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 GDPD2Q9HCC8 539 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 TMEM9BQ9NQ34 198 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 RBM12Q9NTZ6 932 aaKnown RBP14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 MIOSQ9NXC5 875 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 FAM13BQ9NYF5 915 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 FBXO2Q9UK22 296 aaPredicted RBP14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 PCDHA7Q9UN72 937 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 BPTFQ12830 3046 aa14.85□□□□□ -0.03
RAPGEF1-204ENST00000414781 COL4A2P08572 1712 aa14.84□□□□□ -0.03
RAPGEF1-204ENST00000414781 WDR27A2RRH5 827 aa14.84□□□□□ -0.03
RAPGEF1-204ENST00000414781 VWA3AA6NCI4 1184 aa14.84□□□□□ -0.03
RAPGEF1-204ENST00000414781 GAS7O60861 476 aa14.84□□□□□ -0.03
RAPGEF1-204ENST00000414781 TXLNAP40222 546 aa14.84□□□□□ -0.03
RAPGEF1-204ENST00000414781 PRSS36Q5K4E3 855 aa14.84□□□□□ -0.03
RAPGEF1-204ENST00000414781 LRCH2Q5VUJ6 765 aa14.84□□□□□ -0.03
RAPGEF1-204ENST00000414781 RALGPS2Q86X27 583 aaPredicted RBP14.84□□□□□ -0.03
RAPGEF1-204ENST00000414781 CEP57Q86XR8 500 aa14.84□□□□□ -0.03
RAPGEF1-204ENST00000414781 HAS1Q92839 578 aa14.84□□□□□ -0.03
RAPGEF1-204ENST00000414781 PYM1Q9BRP8 204 aaKnown RBP14.84□□□□□ -0.03
RAPGEF1-204ENST00000414781 TEKT3Q9BXF9 490 aa14.84□□□□□ -0.03
RAPGEF1-204ENST00000414781 TRPV4Q9HBA0 871 aa14.84□□□□□ -0.03
RAPGEF1-204ENST00000414781 LNP1A1A4G5 178 aa14.83□□□□□ -0.04
RAPGEF1-204ENST00000414781 H0Y626 953 aa14.83□□□□□ -0.04
RAPGEF1-204ENST00000414781 ARNTLO00327 626 aa14.83□□□□□ -0.04
RAPGEF1-204ENST00000414781 ADAM12O43184 909 aa14.83□□□□□ -0.04
RAPGEF1-204ENST00000414781 SLC26A4O43511 780 aa14.83□□□□□ -0.04
RAPGEF1-204ENST00000414781 CHMP2AO43633 222 aa14.83□□□□□ -0.04
RAPGEF1-204ENST00000414781 HYAL3O43820 417 aaPredicted RBP14.83□□□□□ -0.04
RAPGEF1-204ENST00000414781 RHOBTB1O94844 696 aa14.83□□□□□ -0.04
RAPGEF1-204ENST00000414781 TRIM16O95361 564 aa14.83□□□□□ -0.04
RAPGEF1-204ENST00000414781 CAVIN2O95810 425 aa14.83□□□□□ -0.04
RAPGEF1-204ENST00000414781 LRG1P02750 347 aa14.83□□□□□ -0.04
RAPGEF1-204ENST00000414781 CMA1P23946 247 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms