RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 PRCPP42785 496 aa14.26□□□□□ -0.13
HDAC8-210ENST00000412342 CYP24A1Q07973 514 aa14.26□□□□□ -0.13
HDAC8-210ENST00000412342 MYBPC2Q14324 1141 aa14.26□□□□□ -0.13
HDAC8-210ENST00000412342 PRSS55Q6UWB4 352 aaPredicted RBP14.26□□□□□ -0.13
HDAC8-210ENST00000412342 C1orf127Q8N9H9 656 aa14.26□□□□□ -0.13
HDAC8-210ENST00000412342 PLEKHO2Q8TD55 490 aa14.26□□□□□ -0.13
HDAC8-210ENST00000412342 RIN2Q8WYP3 895 aaPredicted RBP14.26□□□□□ -0.13
HDAC8-210ENST00000412342 MSLNLQ96KJ4 702 aa14.26□□□□□ -0.13
HDAC8-210ENST00000412342 SUSD3Q96L08 255 aa14.26□□□□□ -0.13
HDAC8-210ENST00000412342 MFSD14AQ96MC6 490 aa14.26□□□□□ -0.13
HDAC8-210ENST00000412342 GBP4Q96PP9 640 aa14.26□□□□□ -0.13
HDAC8-210ENST00000412342 TTPALQ9BTX7 342 aa14.26□□□□□ -0.13
HDAC8-210ENST00000412342 SSX2IPQ9Y2D8 614 aa14.26□□□□□ -0.13
HDAC8-210ENST00000412342 FSD2A1L4K1 749 aa14.25□□□□□ -0.13
HDAC8-210ENST00000412342 M0QZQ0 153 aa14.25□□□□□ -0.13
HDAC8-210ENST00000412342 SPTLC1O15269 473 aa14.25□□□□□ -0.13
HDAC8-210ENST00000412342 CD44P16070 742 aaKnown RBP14.25□□□□□ -0.13
HDAC8-210ENST00000412342 KCNA5P22460 613 aa14.25□□□□□ -0.13
HDAC8-210ENST00000412342 CASP4P49662 377 aa14.25□□□□□ -0.13
HDAC8-210ENST00000412342 MORC3Q14149 939 aa14.25□□□□□ -0.13
HDAC8-210ENST00000412342 BMS1Q14692 1282 aaKnown RBP14.25□□□□□ -0.13
HDAC8-210ENST00000412342 PSMD6Q15008 389 aa14.25□□□□□ -0.13
HDAC8-210ENST00000412342 CENPPQ6IPU0 288 aa14.25□□□□□ -0.13
HDAC8-210ENST00000412342 ADSSL1Q8N142 457 aa14.25□□□□□ -0.13
HDAC8-210ENST00000412342 RDH13Q8NBN7 331 aa14.25□□□□□ -0.13
HDAC8-210ENST00000412342 OR5B17Q8NGF7 314 aa14.25□□□□□ -0.13
HDAC8-210ENST00000412342 NOC3LQ8WTT2 800 aaKnown RBP14.25□□□□□ -0.13
HDAC8-210ENST00000412342 ATXN2LQ8WWM7 1075 aaKnown RBP14.25□□□□□ -0.13
HDAC8-210ENST00000412342 BORCS6Q96GS4 357 aa14.25□□□□□ -0.13
HDAC8-210ENST00000412342 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.25□□□□□ -0.13
HDAC8-210ENST00000412342 INTS13Q9NVM9 706 aa14.25□□□□□ -0.13
HDAC8-210ENST00000412342 DPP3Q9NY33 737 aa14.25□□□□□ -0.13
HDAC8-210ENST00000412342 FNIP2Q9P278 1114 aa14.25□□□□□ -0.13
HDAC8-210ENST00000412342 SIX4Q9UIU6 781 aa14.25□□□□□ -0.13
HDAC8-210ENST00000412342 BARX2Q9UMQ3 279 aaPredicted RBP14.25□□□□□ -0.13
HDAC8-210ENST00000412342 H3BQ06 376 aaPredicted RBP14.24□□□□□ -0.13
HDAC8-210ENST00000412342 SYN3O14994 580 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 ADAM12O43184 909 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 TRAPPC3O43617 180 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 CALUO43852 315 aaPredicted RBP14.24□□□□□ -0.13
HDAC8-210ENST00000412342 TBC1D4O60343 1298 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 EXOC3O60645 756 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 EPCAMP16422 314 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 RPL17P18621 184 aaKnown RBP14.24□□□□□ -0.13
HDAC8-210ENST00000412342 MCM4P33991 863 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 CA8P35219 290 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 CLCN4P51793 760 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 PMS1P54277 932 aaKnown RBP14.24□□□□□ -0.13
HDAC8-210ENST00000412342 LILRA4P59901 499 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 MCCD1P59942 119 aaPredicted RBP14.24□□□□□ -0.13
HDAC8-210ENST00000412342 TFAMQ00059 246 aaKnown RBP14.24□□□□□ -0.13
HDAC8-210ENST00000412342 MRPL58Q14197 206 aaKnown RBP14.24□□□□□ -0.13
HDAC8-210ENST00000412342 SURF1Q15526 300 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 PSMD5Q16401 504 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 CAMK4Q16566 473 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 EDRF1Q3B7T1 1238 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 LEXMQ3ZCV2 418 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 LMBRD2Q68DH5 695 aaPredicted RBP14.24□□□□□ -0.13
HDAC8-210ENST00000412342 KIAA1841Q6NSI8 718 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 RSPO2Q6UXX9 243 aaPredicted RBP14.24□□□□□ -0.13
HDAC8-210ENST00000412342 WDR49Q8IV35 697 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 ZC3H3Q8IXZ2 948 aaKnown RBP14.24□□□□□ -0.13
HDAC8-210ENST00000412342 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.24□□□□□ -0.13
HDAC8-210ENST00000412342 GPT2Q8TD30 523 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 CGRRF1Q99675 332 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 CLSTN3Q9BQT9 956 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 EMILIN2Q9BXX0 1053 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 MTMR12Q9C0I1 747 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 CLSTN2Q9H4D0 955 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 MTRRQ9UBK8 725 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 NUB1Q9Y5A7 615 aa14.24□□□□□ -0.13
HDAC8-210ENST00000412342 PPP1R3GB7ZBB8 358 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 MAPK13O15264 365 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 AKAP3O75969 853 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 ITGB3P05106 788 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 NR2F2P24468 414 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 POLR2BP30876 1174 aaKnown RBP14.23□□□□□ -0.13
HDAC8-210ENST00000412342 NDUFV1P49821 464 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 KCNQ1P51787 676 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 CLDN10P78369 228 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 VARS2Q5ST30 1063 aaKnown RBP14.23□□□□□ -0.13
HDAC8-210ENST00000412342 C1orf220Q5T0J3 134 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 ISM2Q6H9L7 571 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 ANKRD54Q6NXT1 300 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 LLGL2Q6P1M3 1020 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 LILRA6Q6PI73 481 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 SYCE2Q6PIF2 218 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 CEP57Q86XR8 500 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 PARD3BQ8TEW8 1205 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 ZNF516Q92618 1163 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 POP1Q99575 1024 aaKnown RBP14.23□□□□□ -0.13
HDAC8-210ENST00000412342 GTPBP4Q9BZE4 634 aaKnown RBP14.23□□□□□ -0.13
HDAC8-210ENST00000412342 KIAA1468Q9P260 1216 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 ITGA11Q9UKX5 1188 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 PCDHB8Q9UN66 801 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 BACE2Q9Y5Z0 518 aa14.23□□□□□ -0.13
HDAC8-210ENST00000412342 C2orf16Q68DN1 1984 aa14.22□□□□□ -0.13
HDAC8-210ENST00000412342 C1RP00736 705 aa14.22□□□□□ -0.13
HDAC8-210ENST00000412342 ADH1AP07327 375 aa14.22□□□□□ -0.13
HDAC8-210ENST00000412342 BMP1P13497 986 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms