RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 HSPA9P38646 679 aaKnown RBP14.51□□□□□ -0.09
LIMS1-205ENST00000410093 RWDD2BP57060 319 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 NOP14P78316 857 aaKnown RBP14.51□□□□□ -0.09
LIMS1-205ENST00000410093 C1QBPQ07021 282 aaKnown RBP14.51□□□□□ -0.09
LIMS1-205ENST00000410093 ZNF792Q3KQV3 632 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 HSDL1Q3SXM5 330 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 CFAP58Q5T655 872 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 TAF3Q5VWG9 929 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 LRIG3Q6UXM1 1119 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 PHF13Q86YI8 300 aaPredicted RBP14.51□□□□□ -0.09
LIMS1-205ENST00000410093 MCOLN2Q8IZK6 566 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 TCHPQ9BT92 498 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 ZNF518BQ9C0D4 1074 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 GOLPH3Q9H4A6 298 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 ST7Q9NRC1 585 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 CPSF3Q9UKF6 684 aaKnown RBP14.51□□□□□ -0.09
LIMS1-205ENST00000410093 MCM3APO60318 1980 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 ZBTB42B2RXF5 422 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 SPOPO43791 374 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 FAM189A1O60320 539 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 RNF40O75150 1001 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 PHF2O75151 1096 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 VNN1O95497 513 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 COMTP21964 271 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 TMOD1P28289 359 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 PHKA2P46019 1235 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 CARSP49589 748 aaKnown RBP14.5□□□□□ -0.09
LIMS1-205ENST00000410093 PEX5P50542 639 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 CDC42EP1Q00587 391 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 MLLT1Q03111 559 aaPredicted RBP14.5□□□□□ -0.09
LIMS1-205ENST00000410093 MESDQ14696 234 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 CYP1B1Q16678 543 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 MAMDC4Q6UXC1 1216 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 RNF149Q8NC42 400 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 PPTC7Q8NI37 304 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 CASKIN2Q8WXE0 1202 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 IFT81Q8WYA0 676 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 HAPLN2Q9GZV7 340 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 HOMER3Q9NSC5 361 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 PCYOX1Q9UHG3 505 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 FEZ2Q9UHY8 353 aaPredicted RBP14.5□□□□□ -0.09
LIMS1-205ENST00000410093 NFU1Q9UMS0 254 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 TNFSF13BQ9Y275 285 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 PCDHB4Q9Y5E5 795 aa14.5□□□□□ -0.09
LIMS1-205ENST00000410093 TNNC2P02585 160 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 HOXC6P09630 235 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 MAPK4P31152 587 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 GGCXP38435 758 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 RNASE9P60153 205 aaKnown RBP14.49□□□□□ -0.09
LIMS1-205ENST00000410093 TAP1Q03518 808 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 ATF7IP2Q5U623 682 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 ARMCX2Q7L311 632 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 EEPD1Q7L9B9 569 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 APBB1IPQ7Z5R6 666 aaPredicted RBP14.49□□□□□ -0.09
LIMS1-205ENST00000410093 DNAAF5Q86Y56 855 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 IQCKQ8N0W5 287 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 ANKRD36BP1Q96IX9 119 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 ZBTB45Q96K62 511 aaPredicted RBP14.49□□□□□ -0.09
LIMS1-205ENST00000410093 AP1M1Q9BXS5 423 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 PTPRHQ9HD43 1115 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 CPA4Q9UI42 421 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 FAN1Q9Y2M0 1017 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 PTPN22Q9Y2R2 807 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 IVNS1ABPQ9Y6Y0 642 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 ZNF236Q9UL36 1845 aa14.49□□□□□ -0.09
LIMS1-205ENST00000410093 MYO1FO00160 1098 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 PPFIA4O75335 1185 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 GNRH1P01148 92 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 SRGAP2CP0DJJ0 459 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 HOXD10P28358 340 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 GNA15P30679 374 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 FNTAP49354 379 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 ZNF132P52740 706 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 DR1Q01658 176 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 MKRN4PQ13434 485 aaPredicted RBP14.48□□□□□ -0.09
LIMS1-205ENST00000410093 TRPC3Q13507 836 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 HLTFQ14527 1009 aaKnown RBP eCLIP14.48□□□□□ -0.09
LIMS1-205ENST00000410093 WDR78Q5VTH9 848 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 DCAF12L1Q5VU92 463 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 EFCAB12Q6NXP0 572 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 SYDE1Q6ZW31 735 aaPredicted RBP14.48□□□□□ -0.09
LIMS1-205ENST00000410093 CROCCP2Q86T23 111 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 NT5DC4Q86YG4 428 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 FBXO16Q8IX29 292 aaPredicted RBP14.48□□□□□ -0.09
LIMS1-205ENST00000410093 TTC39CQ8N584 583 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 UBR7Q8N806 425 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 C12orf50Q8NA57 414 aaPredicted RBP14.48□□□□□ -0.09
LIMS1-205ENST00000410093 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.48□□□□□ -0.09
LIMS1-205ENST00000410093 PI4K2AQ9BTU6 479 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 NIF3L1Q9GZT8 377 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 DDX47Q9H0S4 455 aaKnown RBP14.48□□□□□ -0.09
LIMS1-205ENST00000410093 SLC5A4Q9NY91 659 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 ANK1P16157 1881 aa14.48□□□□□ -0.09
LIMS1-205ENST00000410093 GOLGA6CA6NDK9 693 aa14.47□□□□□ -0.09
LIMS1-205ENST00000410093 AGPSO00116 658 aa14.47□□□□□ -0.09
LIMS1-205ENST00000410093 ABLIM1O14639 778 aa14.47□□□□□ -0.09
LIMS1-205ENST00000410093 CALB1P05937 261 aa14.47□□□□□ -0.09
LIMS1-205ENST00000410093 GOLGA6DP0CG33 693 aa14.47□□□□□ -0.09
LIMS1-205ENST00000410093 MCF2P10911 925 aa14.47□□□□□ -0.09
LIMS1-205ENST00000410093 CETN2P41208 172 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms