RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 EXOC3O60645 756 aa17.19■□□□□ 0.34
GDPD3-202ENST00000406256 CLASP2O75122 1294 aaKnown RBP17.19■□□□□ 0.34
GDPD3-202ENST00000406256 TBX10O75333 385 aa17.19■□□□□ 0.34
GDPD3-202ENST00000406256 AKAP3O75969 853 aa17.19■□□□□ 0.34
GDPD3-202ENST00000406256 KIF20AO95235 890 aa17.19■□□□□ 0.34
GDPD3-202ENST00000406256 CNPP09543 421 aaKnown RBP17.19■□□□□ 0.34
GDPD3-202ENST00000406256 TKTP29401 623 aaKnown RBP17.19■□□□□ 0.34
GDPD3-202ENST00000406256 ADAM15Q13444 863 aa17.19■□□□□ 0.34
GDPD3-202ENST00000406256 EDRF1Q3B7T1 1238 aa17.19■□□□□ 0.34
GDPD3-202ENST00000406256 USP41Q3LFD5 358 aa17.19■□□□□ 0.34
GDPD3-202ENST00000406256 C1orf220Q5T0J3 134 aa17.19■□□□□ 0.34
GDPD3-202ENST00000406256 FAM171A1Q5VUB5 890 aa17.19■□□□□ 0.34
GDPD3-202ENST00000406256 LNX1Q8TBB1 728 aaPredicted RBP17.19■□□□□ 0.34
GDPD3-202ENST00000406256 ZNF516Q92618 1163 aa17.19■□□□□ 0.34
GDPD3-202ENST00000406256 PABPC5Q96DU9 382 aaKnown RBP17.19■□□□□ 0.34
GDPD3-202ENST00000406256 SUSD3Q96L08 255 aa17.19■□□□□ 0.34
GDPD3-202ENST00000406256 POP1Q99575 1024 aaKnown RBP17.19■□□□□ 0.34
GDPD3-202ENST00000406256 MTMR12Q9C0I1 747 aa17.19■□□□□ 0.34
GDPD3-202ENST00000406256 DPP3Q9NY33 737 aa17.19■□□□□ 0.34
GDPD3-202ENST00000406256 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.19■□□□□ 0.34
GDPD3-202ENST00000406256 TTC28Q96AY4 2481 aa17.19■□□□□ 0.34
GDPD3-202ENST00000406256 M0QZQ0 153 aa17.18■□□□□ 0.34
GDPD3-202ENST00000406256 C2CD2LO14523 706 aa17.18■□□□□ 0.34
GDPD3-202ENST00000406256 XPOTO43592 962 aaKnown RBP17.18■□□□□ 0.34
GDPD3-202ENST00000406256 CALUO43852 315 aaPredicted RBP17.18■□□□□ 0.34
GDPD3-202ENST00000406256 URODP06132 367 aa17.18■□□□□ 0.34
GDPD3-202ENST00000406256 NR2F2P24468 414 aa17.18■□□□□ 0.34
GDPD3-202ENST00000406256 CLDN10P78369 228 aa17.18■□□□□ 0.34
GDPD3-202ENST00000406256 PRSS55Q6UWB4 352 aaPredicted RBP17.18■□□□□ 0.34
GDPD3-202ENST00000406256 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.18■□□□□ 0.34
GDPD3-202ENST00000406256 RBM43Q6ZSC3 357 aaKnown RBP17.18■□□□□ 0.34
GDPD3-202ENST00000406256 EFHBQ8N7U6 833 aa17.18■□□□□ 0.34
GDPD3-202ENST00000406256 PARD3BQ8TEW8 1205 aa17.18■□□□□ 0.34
GDPD3-202ENST00000406256 PIK3R5Q8WYR1 880 aa17.18■□□□□ 0.34
GDPD3-202ENST00000406256 KLHL5Q96PQ7 755 aa17.18■□□□□ 0.34
GDPD3-202ENST00000406256 MED15Q96RN5 788 aa17.18■□□□□ 0.34
GDPD3-202ENST00000406256 CGRRF1Q99675 332 aa17.18■□□□□ 0.34
GDPD3-202ENST00000406256 TLE6Q9H808 572 aa17.18■□□□□ 0.34
GDPD3-202ENST00000406256 CLEC1BQ9P126 229 aa17.18■□□□□ 0.34
GDPD3-202ENST00000406256 TCF20Q9UGU0 1960 aaKnown RBP17.18■□□□□ 0.34
GDPD3-202ENST00000406256 LRRIQ3A6PVS8 624 aaPredicted RBP17.17■□□□□ 0.34
GDPD3-202ENST00000406256 TEX28O15482 410 aa17.17■□□□□ 0.34
GDPD3-202ENST00000406256 ADAM12O43184 909 aa17.17■□□□□ 0.34
GDPD3-202ENST00000406256 TBC1D4O60343 1298 aa17.17■□□□□ 0.34
GDPD3-202ENST00000406256 MCM4P33991 863 aa17.17■□□□□ 0.34
GDPD3-202ENST00000406256 LILRA4P59901 499 aa17.17■□□□□ 0.34
GDPD3-202ENST00000406256 DLG4P78352 724 aa17.17■□□□□ 0.34
GDPD3-202ENST00000406256 TFAMQ00059 246 aaKnown RBP17.17■□□□□ 0.34
GDPD3-202ENST00000406256 ELAVL2Q12926 359 aaKnown RBP17.17■□□□□ 0.34
GDPD3-202ENST00000406256 MRPL58Q14197 206 aaKnown RBP17.17■□□□□ 0.34
GDPD3-202ENST00000406256 ANKRD40Q6AI12 368 aa17.17■□□□□ 0.34
GDPD3-202ENST00000406256 RSPO2Q6UXX9 243 aaPredicted RBP17.17■□□□□ 0.34
GDPD3-202ENST00000406256 WDR49Q8IV35 697 aa17.17■□□□□ 0.34
GDPD3-202ENST00000406256 TRIML1Q8N9V2 468 aa17.17■□□□□ 0.34
GDPD3-202ENST00000406256 SLC22A17Q8WUG5 538 aa17.17■□□□□ 0.34
GDPD3-202ENST00000406256 RIN2Q8WYP3 895 aaPredicted RBP17.17■□□□□ 0.34
GDPD3-202ENST00000406256 DUSP9Q99956 384 aaKnown RBP17.17■□□□□ 0.34
GDPD3-202ENST00000406256 TTPALQ9BTX7 342 aa17.17■□□□□ 0.34
GDPD3-202ENST00000406256 GTPBP4Q9BZE4 634 aaKnown RBP17.17■□□□□ 0.34
GDPD3-202ENST00000406256 NUP62CLQ9H1M0 184 aa17.17■□□□□ 0.34
GDPD3-202ENST00000406256 IGFLR1Q9H665 355 aa17.17■□□□□ 0.34
GDPD3-202ENST00000406256 UBE2ZQ9H832 354 aaPredicted RBP17.17■□□□□ 0.34
GDPD3-202ENST00000406256 MRPL17Q9NRX2 175 aaKnown RBP17.17■□□□□ 0.34
GDPD3-202ENST00000406256 HCFC2Q9Y5Z7 792 aa17.17■□□□□ 0.34
GDPD3-202ENST00000406256 MAPK13O15264 365 aa17.16■□□□□ 0.34
GDPD3-202ENST00000406256 ITGB3P05106 788 aa17.16■□□□□ 0.34
GDPD3-202ENST00000406256 RPL17P18621 184 aaKnown RBP17.16■□□□□ 0.34
GDPD3-202ENST00000406256 CCNE1P24864 410 aa17.16■□□□□ 0.34
GDPD3-202ENST00000406256 TFF2Q03403 129 aa17.16■□□□□ 0.34
GDPD3-202ENST00000406256 SURF1Q15526 300 aa17.16■□□□□ 0.34
GDPD3-202ENST00000406256 TTI2Q6NXR4 508 aa17.16■□□□□ 0.34
GDPD3-202ENST00000406256 TMEM184AQ6ZMB5 413 aa17.16■□□□□ 0.34
GDPD3-202ENST00000406256 FEZF2Q8TBJ5 459 aa17.16■□□□□ 0.34
GDPD3-202ENST00000406256 CCDC127Q96BQ5 260 aa17.16■□□□□ 0.34
GDPD3-202ENST00000406256 EEF2KMTQ96G04 330 aa17.16■□□□□ 0.34
GDPD3-202ENST00000406256 MSLNLQ96KJ4 702 aa17.16■□□□□ 0.34
GDPD3-202ENST00000406256 CDCA3Q99618 268 aaPredicted RBP17.16■□□□□ 0.34
GDPD3-202ENST00000406256 CLSTN3Q9BQT9 956 aa17.16■□□□□ 0.34
GDPD3-202ENST00000406256 FNIP2Q9P278 1114 aa17.16■□□□□ 0.34
GDPD3-202ENST00000406256 DENND4AQ7Z401 1863 aa17.16■□□□□ 0.34
GDPD3-202ENST00000406256 GOLGA6L22H0YM25 854 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 SYN3O14994 580 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 DLATP10515 647 aaKnown RBP17.15■□□□□ 0.34
GDPD3-202ENST00000406256 EPCAMP16422 314 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 POLR2BP30876 1174 aaKnown RBP17.15■□□□□ 0.34
GDPD3-202ENST00000406256 CLCN4P51793 760 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 ADAM9Q13443 819 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 CEP135Q66GS9 1140 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 FOXR2Q6PJQ5 311 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 DHTKD1Q96HY7 919 aaPredicted RBP17.15■□□□□ 0.34
GDPD3-202ENST00000406256 CLDND1Q9NY35 253 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 MTRRQ9UBK8 725 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 ITGA11Q9UKX5 1188 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 BARX2Q9UMQ3 279 aaPredicted RBP17.15■□□□□ 0.34
GDPD3-202ENST00000406256 PCDHB8Q9UN66 801 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 LRRC63Q05C16 580 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 SKIV2LQ15477 1246 aaKnown RBP17.15■□□□□ 0.34
GDPD3-202ENST00000406256 PSMD5Q16401 504 aa17.15■□□□□ 0.34
GDPD3-202ENST00000406256 VARS2Q5ST30 1063 aaKnown RBP17.15■□□□□ 0.34
GDPD3-202ENST00000406256 C15orf39Q6ZRI6 1047 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms