RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 AGAP1Q9UPQ3 857 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 TBC1D30Q9Y2I9 924 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 ADAMTS20P59510 1910 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 ABHD14A-ACY1A0A1B0GW23 586 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 F5H423 210 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 TEX33O43247 280 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 PAX4O43316 350 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 FRS3O43559 492 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 ITGB1P05556 798 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 SNRPA1P09661 255 aaKnown RBP4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 FTH1P19P0C7X4 201 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 SETSIPP0DME0 302 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 MTHFD1P11586 935 aaKnown RBP4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 TSHRP16473 764 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 BMP7P18075 431 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 MSX2P35548 267 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 ZNF135P52742 658 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 CLRN1P58418 232 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 RPS16P62249 146 aaKnown RBP4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 PMS2P11Q13670 270 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 GRM7Q14831 915 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 VPS72Q15906 364 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 DACT2Q5SW24 774 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 FAM83BQ5T0W9 1011 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 LCE1DQ5T752 114 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 C11orf96Q7Z7L8 435 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 LGI4Q8N135 537 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 GIMAP8Q8ND71 665 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 ACRBPQ8NEB7 543 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 TMIEQ8NEW7 156 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 BHLHE22Q8NFJ8 381 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 IL17RDQ8NFM7 739 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 TFAP2CQ92754 450 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 CRB3Q9BUF7 120 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 BTBD1Q9H0C5 482 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 VPS11Q9H270 941 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 BRD9Q9H8M2 597 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 CERS4Q9HA82 394 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 AS3MTQ9HBK9 375 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 PIH1D1Q9NWS0 290 aaKnown RBP4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 COL20A1Q9P218 1284 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 SH3BP1Q9Y3L3 701 aa4.78□□□□□ -1.64
HMGB1P17-201ENST00000403495 TBKBP1A7MCY6 615 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 M0QYG6 137 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 BTN3A1O00481 513 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 LAMTOR5O43504 91 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 SLC43A1O75387 559 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 AGFG2O95081 481 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 UNC5CO95185 931 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 POMCP01189 267 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 GNAI3P08754 354 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 HARSP12081 509 aaKnown RBP4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 EN2P19622 333 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 GNAI1P63096 354 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 FOXL1Q12952 345 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 SLC13A2Q13183 592 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 CTBP1Q13363 440 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 TRIM14Q14142 442 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 UBXN2BQ14CS0 331 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 ELAVL1Q15717 326 aaKnown RBP4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 BMT2Q1RMZ1 405 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 GRAMD1BQ3KR37 738 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 ATXN7L2Q5T6C5 722 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 HIBCHQ6NVY1 386 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 ERAP2Q6P179 960 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 ZNF365Q70YC5 407 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 LIMS2Q7Z4I7 341 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 C1QL4Q86Z23 238 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 SYT12Q8IV01 421 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 MPP5Q8N3R9 675 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 SLC17A8Q8NDX2 589 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 NSUN7Q8NE18 718 aaKnown RBP4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 TBC1D15Q8TC07 691 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 TLR10Q9BXR5 811 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 IMPG2Q9BZV3 1241 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 SMURF2Q9HAU4 748 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 PPP4R1LQ9P1A2 415 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 POGKQ9P215 609 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 HDAC5Q9UQL6 1122 aa4.77□□□□□ -1.65
HMGB1P17-201ENST00000403495 ZNF536O15090 1300 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 CCDC78A2IDD5 438 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 PRR5-ARHGAP8B1AHC4 643 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 ISM1B1AKI9 464 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 B5MCH6 92 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 E9PLN8 166 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 IFRD1O00458 451 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 FOXS1O43638 330 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 NBNO60934 754 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 VPS4BO75351 444 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 DNAJB5O75953 348 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 HAUS5O94927 633 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 ABHD16AO95870 558 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 PARP1P09874 1014 aaKnown RBP4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 RARBP10826 455 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 GNAT2P19087 354 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 IL6STP40189 918 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 CHN2P52757 468 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 ARFIP2P53365 341 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 EPHB4P54760 987 aa4.76□□□□□ -1.65
HMGB1P17-201ENST00000403495 KIF22Q14807 665 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms