RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 PTK2Q05397 1052 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 NAB2Q15742 525 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 HPS1Q92902 700 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 PHF20Q9BVI0 1012 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 CCSER1Q9C0I3 900 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 ZCWPW1Q9H0M4 648 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 AGPAT5Q9NUQ2 364 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 AMACRQ9UHK6 382 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 JAG2Q9Y219 1238 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 ROBO2Q9HCK4 1378 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 ZC3H13Q5T200 1668 aaKnown RBP10.07□□□□□ -0.8
SMAD9-203ENST00000399275 PFASO15067 1338 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 USP31Q70CQ4 1352 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 RFC4P35249 363 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 BCAP31P51572 246 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 KPNA2P52292 529 aaKnown RBP10.07□□□□□ -0.8
SMAD9-203ENST00000399275 CHRNDQ07001 517 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 TRAP1Q12931 704 aaKnown RBP10.07□□□□□ -0.8
SMAD9-203ENST00000399275 C6orf183Q5T699 404 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 NT5C1BQ96P26 610 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 MAP3K14Q99558 947 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 SPRTNQ9H040 489 aaPredicted RBP10.07□□□□□ -0.8
SMAD9-203ENST00000399275 EPS8L2Q9H6S3 715 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 SENP1Q9P0U3 644 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 TMED5Q9Y3A6 229 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 B2RBV5 119 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 MED26O95402 600 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 CPP00450 1065 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 LTKP29376 864 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 KIAA1755Q5JYT7 1200 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 SLC10A5Q5PT55 438 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 ARHGAP17Q68EM7 881 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 FOXR1Q6PIV2 292 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 PRR23BQ6ZRT6 265 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 CLEC4FQ8N1N0 589 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 C19orf18Q8NEA5 215 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 ARL8AQ96BM9 186 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 ERGIC2Q96RQ1 377 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 MRPL47Q9HD33 250 aaKnown RBP10.07□□□□□ -0.8
SMAD9-203ENST00000399275 CAMSAP1Q5T5Y3 1602 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 UTYO14607 1347 aa10.07□□□□□ -0.8
SMAD9-203ENST00000399275 SLC9A1P19634 815 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 HSD17B3P37058 310 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 NUP62P37198 522 aaPredicted RBP10.06□□□□□ -0.8
SMAD9-203ENST00000399275 ST3GAL1Q11201 340 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 RFFLQ8WZ73 363 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 WNT8AQ9H1J5 351 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 NEUROG2Q9H2A3 272 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 MARCH7Q9H992 704 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 RRN3Q9NYV6 651 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 PLCL2Q9UPR0 1127 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 TAF6LQ9Y6J9 622 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 ATXN2Q99700 1313 aaKnown RBP10.06□□□□□ -0.8
SMAD9-203ENST00000399275 F8W031 263 aaPredicted RBP10.06□□□□□ -0.8
SMAD9-203ENST00000399275 SGK1O00141 431 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 STAM2O75886 525 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 CDKAL1Q5VV42 579 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 SPOPLQ6IQ16 392 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 SYDE1Q6ZW31 735 aaPredicted RBP10.06□□□□□ -0.8
SMAD9-203ENST00000399275 SCAIQ8N9R8 606 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 APOL4Q9BPW4 351 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 TEX13BQ9BXU2 312 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 ZNF224Q9NZL3 707 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 CCDC130P13994 396 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 CDH2P19022 906 aaPredicted RBP10.06□□□□□ -0.8
SMAD9-203ENST00000399275 GYG1P46976 350 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 GPC5P78333 572 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 PLOD1Q02809 727 aaPredicted RBP10.06□□□□□ -0.8
SMAD9-203ENST00000399275 KCNH2Q12809 1159 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 STAT4Q14765 748 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 TRIM69Q86WT6 500 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 TAGAPQ8N103 731 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 IGDCC4Q8TDY8 1250 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 OSCP1Q8WVF1 389 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 SNF8Q96H20 258 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 RPS6KC1Q96S38 1066 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 GPC6Q9Y625 555 aaPredicted RBP10.06□□□□□ -0.8
SMAD9-203ENST00000399275 CCDC166P0CW27 439 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 HMBOX1Q6NT76 420 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 IKBIPQ70UQ0 350 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 GIMAP8Q8ND71 665 aaPredicted RBP10.06□□□□□ -0.8
SMAD9-203ENST00000399275 AENQ8WTP8 325 aaKnown RBP10.06□□□□□ -0.8
SMAD9-203ENST00000399275 HDAC2Q92769 488 aaKnown RBP10.06□□□□□ -0.8
SMAD9-203ENST00000399275 TMEM206Q9H813 350 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 TSPOAP1O95153 1857 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 OVOS2A0A0G2JMS6 1433 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 AREL1O15033 823 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 CHEK2O96017 543 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 RFX1P22670 979 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 TARSP26639 723 aaKnown RBP10.06□□□□□ -0.8
SMAD9-203ENST00000399275 AP1S2P56377 157 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 FIGNQ5HY92 759 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 LLGL2Q6P1M3 1020 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 COL23A1Q86Y22 540 aaPredicted RBP10.06□□□□□ -0.8
SMAD9-203ENST00000399275 CLVS1Q8IUQ0 354 aaPredicted RBP10.06□□□□□ -0.8
SMAD9-203ENST00000399275 CABLES1Q8TDN4 633 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 CMTM5Q96DZ9 223 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 C7orf25Q9BPX7 421 aa10.06□□□□□ -0.8
SMAD9-203ENST00000399275 HEG1Q9ULI3 1381 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 H0YCG3 227 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms