RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 NOL4O94818 638 aa25.34■■□□□ 1.65
TSPAN4-202ENST00000397396 CASP14P31944 242 aa25.34■■□□□ 1.65
TSPAN4-202ENST00000397396 MYL6P60660 151 aa25.34■■□□□ 1.65
TSPAN4-202ENST00000397396 CLLU1OSQ5K130 101 aa25.34■■□□□ 1.65
TSPAN4-202ENST00000397396 C9orf57Q5W0N0 161 aa25.34■■□□□ 1.65
TSPAN4-202ENST00000397396 CRIPAKQ8N1N5 446 aa25.34■■□□□ 1.65
TSPAN4-202ENST00000397396 PPM1KQ8N3J5 372 aa25.34■■□□□ 1.65
TSPAN4-202ENST00000397396 CXorf38Q8TB03 319 aa25.34■■□□□ 1.65
TSPAN4-202ENST00000397396 JAKMIP2Q96AA8 810 aa25.34■■□□□ 1.65
TSPAN4-202ENST00000397396 C18orf25Q96B23 403 aaPredicted RBP25.34■■□□□ 1.65
TSPAN4-202ENST00000397396 FAM124BQ9H5Z6 455 aaPredicted RBP25.34■■□□□ 1.65
TSPAN4-202ENST00000397396 ANO9A1A5B4 782 aa25.33■■□□□ 1.64
TSPAN4-202ENST00000397396 NRDCO43847 1150 aa25.33■■□□□ 1.64
TSPAN4-202ENST00000397396 CST3P01034 146 aaPredicted RBP25.33■■□□□ 1.64
TSPAN4-202ENST00000397396 FGFR1P11362 822 aa25.33■■□□□ 1.64
TSPAN4-202ENST00000397396 WDR5P61964 334 aaKnown RBP25.33■■□□□ 1.64
TSPAN4-202ENST00000397396 NAB2Q15742 525 aa25.33■■□□□ 1.64
TSPAN4-202ENST00000397396 ZNF667Q5HYK9 610 aa25.33■■□□□ 1.64
TSPAN4-202ENST00000397396 DPY19L2P1Q6NXN4 242 aa25.33■■□□□ 1.64
TSPAN4-202ENST00000397396 HPDLQ96IR7 371 aa25.33■■□□□ 1.64
TSPAN4-202ENST00000397396 FAM84AQ96KN4 292 aa25.33■■□□□ 1.64
TSPAN4-202ENST00000397396 FAM193BQ96PV7 902 aaPredicted RBP25.33■■□□□ 1.64
TSPAN4-202ENST00000397396 NIF3L1Q9GZT8 377 aa25.33■■□□□ 1.64
TSPAN4-202ENST00000397396 CXCL16Q9H2A7 254 aa25.33■■□□□ 1.64
TSPAN4-202ENST00000397396 RNF19AQ9NV58 838 aa25.33■■□□□ 1.64
TSPAN4-202ENST00000397396 DNAJC12Q9UKB3 198 aa25.33■■□□□ 1.64
TSPAN4-202ENST00000397396 PIRO00625 290 aa25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 POMCP01189 267 aa25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 ACRP10323 421 aa25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 KRT9P35527 623 aa25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 TAF6P49848 677 aa25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 YWHAEP62258 255 aaKnown RBP25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 RNASELQ05823 741 aaKnown RBP25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 LRMPQ12912 555 aa25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 SV2CQ496J9 727 aa25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 PHLDB3Q6NSJ2 640 aa25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 LRRC43Q8N309 656 aa25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 CPLX3Q8WVH0 158 aa25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 TOP1MTQ969P6 601 aa25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 PI4K2AQ9BTU6 479 aa25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 NAA15Q9BXJ9 866 aaKnown RBP25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 STK33Q9BYT3 514 aa25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 XYLT2Q9H1B5 865 aa25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 UBE2TQ9NPD8 197 aaPredicted RBP25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 PLAGL2Q9UPG8 496 aa25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 FHOD1Q9Y613 1164 aa25.32■■□□□ 1.64
TSPAN4-202ENST00000397396 TRIP11Q15643 1979 aa25.31■■□□□ 1.64
TSPAN4-202ENST00000397396 CARNS1A5YM72 827 aa25.31■■□□□ 1.64
TSPAN4-202ENST00000397396 EPHB6O15197 1021 aa25.31■■□□□ 1.64
TSPAN4-202ENST00000397396 SYN1P17600 705 aa25.31■■□□□ 1.64
TSPAN4-202ENST00000397396 FXR1P51114 621 aaKnown RBP eCLIP25.31■■□□□ 1.64
TSPAN4-202ENST00000397396 GUCY2FP51841 1108 aa25.31■■□□□ 1.64
TSPAN4-202ENST00000397396 RAPGEF1Q13905 1077 aa25.31■■□□□ 1.64
TSPAN4-202ENST00000397396 ARID5BQ14865 1188 aa25.31■■□□□ 1.64
TSPAN4-202ENST00000397396 IQCEQ6IPM2 695 aa25.31■■□□□ 1.64
TSPAN4-202ENST00000397396 CCDC186Q7Z3E2 898 aa25.31■■□□□ 1.64
TSPAN4-202ENST00000397396 OR8K1Q8NGG5 319 aa25.31■■□□□ 1.64
TSPAN4-202ENST00000397396 CASD1Q96PB1 797 aa25.31■■□□□ 1.64
TSPAN4-202ENST00000397396 NLRC4Q9NPP4 1024 aa25.31■■□□□ 1.64
TSPAN4-202ENST00000397396 ZNHIT6Q9NWK9 470 aaKnown RBP25.31■■□□□ 1.64
TSPAN4-202ENST00000397396 MIOSQ9NXC5 875 aa25.31■■□□□ 1.64
TSPAN4-202ENST00000397396 ZMYND8Q9ULU4 1186 aaPredicted RBP25.31■■□□□ 1.64
TSPAN4-202ENST00000397396 CCDC172P0C7W6 258 aa25.3■■□□□ 1.64
TSPAN4-202ENST00000397396 STAT1P42224 750 aa25.3■■□□□ 1.64
TSPAN4-202ENST00000397396 TNNC1P63316 161 aa25.3■■□□□ 1.64
TSPAN4-202ENST00000397396 SOX4Q06945 474 aaPredicted RBP25.3■■□□□ 1.64
TSPAN4-202ENST00000397396 CUL2Q13617 745 aa25.3■■□□□ 1.64
TSPAN4-202ENST00000397396 ZNF365Q70YC5 407 aa25.3■■□□□ 1.64
TSPAN4-202ENST00000397396 ARHGEF19Q8IW93 802 aa25.3■■□□□ 1.64
TSPAN4-202ENST00000397396 TTC39CQ8N584 583 aa25.3■■□□□ 1.64
TSPAN4-202ENST00000397396 SYN2Q92777 582 aaPredicted RBP25.3■■□□□ 1.64
TSPAN4-202ENST00000397396 PANX2Q96RD6 677 aa25.3■■□□□ 1.64
TSPAN4-202ENST00000397396 TBC1D13Q9NVG8 400 aa25.3■■□□□ 1.64
TSPAN4-202ENST00000397396 TDRD15B5MCY1 1934 aaKnown RBP25.29■■□□□ 1.64
TSPAN4-202ENST00000397396 ZBBXA8MT70 800 aa25.29■■□□□ 1.64
TSPAN4-202ENST00000397396 PODXLO00592 558 aa25.29■■□□□ 1.64
TSPAN4-202ENST00000397396 DSC1Q08554 894 aa25.29■■□□□ 1.64
TSPAN4-202ENST00000397396 WDR72Q3MJ13 1102 aa25.29■■□□□ 1.64
TSPAN4-202ENST00000397396 TMEM240Q5SV17 173 aa25.29■■□□□ 1.64
TSPAN4-202ENST00000397396 PDXDC1Q6P996 788 aa25.29■■□□□ 1.64
TSPAN4-202ENST00000397396 RRAGAQ7L523 313 aa25.29■■□□□ 1.64
TSPAN4-202ENST00000397396 OTOP2Q7RTS6 562 aa25.29■■□□□ 1.64
TSPAN4-202ENST00000397396 BAP1Q92560 729 aa25.29■■□□□ 1.64
TSPAN4-202ENST00000397396 DNAJC7Q99615 494 aa25.29■■□□□ 1.64
TSPAN4-202ENST00000397396 CYP3A43Q9HB55 503 aa25.29■■□□□ 1.64
TSPAN4-202ENST00000397396 APOBEC3GQ9HC16 384 aaKnown RBP25.29■■□□□ 1.64
TSPAN4-202ENST00000397396 ABHD10Q9NUJ1 306 aa25.29■■□□□ 1.64
TSPAN4-202ENST00000397396 NUB1Q9Y5A7 615 aa25.29■■□□□ 1.64
TSPAN4-202ENST00000397396 ARHGEF37A1IGU5 675 aa25.28■■□□□ 1.64
TSPAN4-202ENST00000397396 TBKBP1A7MCY6 615 aa25.28■■□□□ 1.64
TSPAN4-202ENST00000397396 DGKIO75912 1065 aa25.28■■□□□ 1.64
TSPAN4-202ENST00000397396 AFF1P51825 1210 aaKnown RBP25.28■■□□□ 1.64
TSPAN4-202ENST00000397396 APBA1Q02410 837 aa25.28■■□□□ 1.64
TSPAN4-202ENST00000397396 SPOPLQ6IQ16 392 aa25.28■■□□□ 1.64
TSPAN4-202ENST00000397396 TC2NQ8N9U0 490 aa25.28■■□□□ 1.64
TSPAN4-202ENST00000397396 CCDC112Q8NEF3 446 aa25.28■■□□□ 1.64
TSPAN4-202ENST00000397396 HERVK_113Q902F9 699 aa25.28■■□□□ 1.64
TSPAN4-202ENST00000397396 TATDN2Q93075 761 aa25.28■■□□□ 1.64
TSPAN4-202ENST00000397396 GOLGA2P5Q9HBQ8 144 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms