RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 EFHBQ8N7U6 833 aa17.91■□□□□ 0.46
CXCL1-201ENST00000395761 OR5B17Q8NGF7 314 aa17.91■□□□□ 0.46
CXCL1-201ENST00000395761 PLEKHO2Q8TD55 490 aa17.91■□□□□ 0.46
CXCL1-201ENST00000395761 HLA-CQ95604 372 aa17.91■□□□□ 0.46
CXCL1-201ENST00000395761 SYAP1Q96A49 352 aaPredicted RBP17.91■□□□□ 0.46
CXCL1-201ENST00000395761 KLHL5Q96PQ7 755 aa17.91■□□□□ 0.46
CXCL1-201ENST00000395761 NUP62CLQ9H1M0 184 aa17.91■□□□□ 0.46
CXCL1-201ENST00000395761 INTS13Q9NVM9 706 aa17.91■□□□□ 0.46
CXCL1-201ENST00000395761 CLDND1Q9NY35 253 aa17.91■□□□□ 0.46
CXCL1-201ENST00000395761 KIAA1468Q9P260 1216 aa17.91■□□□□ 0.46
CXCL1-201ENST00000395761 NUB1Q9Y5A7 615 aa17.91■□□□□ 0.46
CXCL1-201ENST00000395761 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.91■□□□□ 0.46
CXCL1-201ENST00000395761 SPTLC1O15269 473 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 TEX28O15482 410 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 TRAPPC3O43617 180 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 GLP2RO95838 553 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 DLATP10515 647 aaKnown RBP17.9■□□□□ 0.46
CXCL1-201ENST00000395761 RPL17P18621 184 aaKnown RBP17.9■□□□□ 0.46
CXCL1-201ENST00000395761 PMS1P54277 932 aaKnown RBP17.9■□□□□ 0.46
CXCL1-201ENST00000395761 KCNC3Q14003 757 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 MYBPC2Q14324 1141 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 PSMD6Q15008 389 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 SURF1Q15526 300 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 NFIL3Q16649 462 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 CCDC183Q5T5S1 534 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 CEP135Q66GS9 1140 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 CENPPQ6IPU0 288 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 LLGL2Q6P1M3 1020 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.9■□□□□ 0.46
CXCL1-201ENST00000395761 CXorf38Q8TB03 319 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 LNX1Q8TBB1 728 aaPredicted RBP17.9■□□□□ 0.46
CXCL1-201ENST00000395761 CACTINQ8WUQ7 758 aaKnown RBP17.9■□□□□ 0.46
CXCL1-201ENST00000395761 PABPC5Q96DU9 382 aaKnown RBP17.9■□□□□ 0.46
CXCL1-201ENST00000395761 SUSD3Q96L08 255 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 CDCA3Q99618 268 aaPredicted RBP17.9■□□□□ 0.46
CXCL1-201ENST00000395761 GTPBP4Q9BZE4 634 aaKnown RBP17.9■□□□□ 0.46
CXCL1-201ENST00000395761 MTMR12Q9C0I1 747 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 UBE2ZQ9H832 354 aaPredicted RBP17.9■□□□□ 0.46
CXCL1-201ENST00000395761 RXFP1Q9HBX9 757 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 TMEM63CQ9P1W3 806 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 PRUNE2Q8WUY3 3088 aa17.9■□□□□ 0.46
CXCL1-201ENST00000395761 TRIM49BA6NDI0 452 aa17.89■□□□□ 0.45
CXCL1-201ENST00000395761 PPP1R3GB7ZBB8 358 aa17.89■□□□□ 0.45
CXCL1-201ENST00000395761 NCK2O43639 380 aa17.89■□□□□ 0.45
CXCL1-201ENST00000395761 KCNA5P22460 613 aa17.89■□□□□ 0.45
CXCL1-201ENST00000395761 NR2F2P24468 414 aa17.89■□□□□ 0.45
CXCL1-201ENST00000395761 LILRA4P59901 499 aa17.89■□□□□ 0.45
CXCL1-201ENST00000395761 ADAM9Q13443 819 aa17.89■□□□□ 0.45
CXCL1-201ENST00000395761 ANKRD40Q6AI12 368 aa17.89■□□□□ 0.45
CXCL1-201ENST00000395761 RBM43Q6ZSC3 357 aaKnown RBP17.89■□□□□ 0.45
CXCL1-201ENST00000395761 C1orf127Q8N9H9 656 aa17.89■□□□□ 0.45
CXCL1-201ENST00000395761 ZNF516Q92618 1163 aa17.89■□□□□ 0.45
CXCL1-201ENST00000395761 EEF2KMTQ96G04 330 aa17.89■□□□□ 0.45
CXCL1-201ENST00000395761 CLEC1BQ9P126 229 aa17.89■□□□□ 0.45
CXCL1-201ENST00000395761 SIX4Q9UIU6 781 aa17.89■□□□□ 0.45
CXCL1-201ENST00000395761 COG5Q9UP83 839 aa17.89■□□□□ 0.45
CXCL1-201ENST00000395761 SSX2IPQ9Y2D8 614 aa17.89■□□□□ 0.45
CXCL1-201ENST00000395761 SPTBN5Q9NRC6 3674 aaKnown RBP17.88■□□□□ 0.45
CXCL1-201ENST00000395761 TBX10O75333 385 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 AKAP3O75969 853 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 ITGB3P05106 788 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 TNNI1P19237 187 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 KLRC2P26717 231 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 POLR2BP30876 1174 aaKnown RBP17.88■□□□□ 0.45
CXCL1-201ENST00000395761 AARSP49588 968 aaKnown RBP eCLIP17.88■□□□□ 0.45
CXCL1-201ENST00000395761 EDRF1Q3B7T1 1238 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 CAVIN1Q6NZI2 390 aaKnown RBP17.88■□□□□ 0.45
CXCL1-201ENST00000395761 WDR49Q8IV35 697 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 GLYCTKQ8IVS8 523 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 GPR65Q8IYL9 337 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 CSGALNACT2Q8N6G5 542 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 SLC22A17Q8WUG5 538 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 PIK3R5Q8WYR1 880 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 FNBP1Q96RU3 617 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 CGRRF1Q99675 332 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 EMILIN2Q9BXX0 1053 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 THEGQ9P2T0 379 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 BARX2Q9UMQ3 279 aaPredicted RBP17.88■□□□□ 0.45
CXCL1-201ENST00000395761 AGAP1Q9UPQ3 857 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 TIMM13Q9Y5L4 95 aaPredicted RBP17.88■□□□□ 0.45
CXCL1-201ENST00000395761 HCFC2Q9Y5Z7 792 aa17.88■□□□□ 0.45
CXCL1-201ENST00000395761 H3BQ06 376 aaPredicted RBP17.87■□□□□ 0.45
CXCL1-201ENST00000395761 M0QZQ0 153 aa17.87■□□□□ 0.45
CXCL1-201ENST00000395761 SYN3O14994 580 aa17.87■□□□□ 0.45
CXCL1-201ENST00000395761 ADAM12O43184 909 aa17.87■□□□□ 0.45
CXCL1-201ENST00000395761 LETM1O95202 739 aaPredicted RBP17.87■□□□□ 0.45
CXCL1-201ENST00000395761 TMEM191BP0C7N4 346 aa17.87■□□□□ 0.45
CXCL1-201ENST00000395761 EPCAMP16422 314 aa17.87■□□□□ 0.45
CXCL1-201ENST00000395761 RPL13P26373 211 aaKnown RBP17.87■□□□□ 0.45
CXCL1-201ENST00000395761 DLG4P78352 724 aa17.87■□□□□ 0.45
CXCL1-201ENST00000395761 PSMD5Q16401 504 aa17.87■□□□□ 0.45
CXCL1-201ENST00000395761 DUOXA2Q1HG44 320 aa17.87■□□□□ 0.45
CXCL1-201ENST00000395761 KLHL10Q6JEL2 608 aa17.87■□□□□ 0.45
CXCL1-201ENST00000395761 PARD3BQ8TEW8 1205 aa17.87■□□□□ 0.45
CXCL1-201ENST00000395761 BORCS6Q96GS4 357 aa17.87■□□□□ 0.45
CXCL1-201ENST00000395761 DHTKD1Q96HY7 919 aaPredicted RBP17.87■□□□□ 0.45
CXCL1-201ENST00000395761 ANKRD36BP1Q96IX9 119 aa17.87■□□□□ 0.45
CXCL1-201ENST00000395761 SENP8Q96LD8 212 aa17.87■□□□□ 0.45
CXCL1-201ENST00000395761 CLSTN3Q9BQT9 956 aa17.87■□□□□ 0.45
CXCL1-201ENST00000395761 FNIP2Q9P278 1114 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms