RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 O00370 1275 aa16.1■□□□□ 0.17
GPC3-202ENST00000394299 FGFR4P22455 802 aa16.1■□□□□ 0.17
GPC3-202ENST00000394299 MAPK4P31152 587 aa16.1■□□□□ 0.17
GPC3-202ENST00000394299 PAK2Q13177 524 aa16.1■□□□□ 0.17
GPC3-202ENST00000394299 DUOXA2Q1HG44 320 aa16.1■□□□□ 0.17
GPC3-202ENST00000394299 ABRAQ8N0Z2 381 aa16.1■□□□□ 0.17
GPC3-202ENST00000394299 UBL4BQ8N7F7 174 aa16.1■□□□□ 0.17
GPC3-202ENST00000394299 FAM71BQ8TC56 605 aa16.1■□□□□ 0.17
GPC3-202ENST00000394299 ACBD3Q9H3P7 528 aa16.1■□□□□ 0.17
GPC3-202ENST00000394299 POLIQ9UNA4 740 aa16.1■□□□□ 0.17
GPC3-202ENST00000394299 PPME1Q9Y570 386 aa16.1■□□□□ 0.17
GPC3-202ENST00000394299 ERICH4A6NGS2 130 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 NSFP46459 744 aaKnown RBP16.09■□□□□ 0.17
GPC3-202ENST00000394299 TFDP1Q14186 410 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 ZNF606Q8WXB4 792 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 C18orf8Q96DM3 657 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 MAML3Q96JK9 1138 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 ZIM3Q96PE6 472 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.09■□□□□ 0.17
GPC3-202ENST00000394299 UVRAGQ9P2Y5 699 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 NXF1Q9UBU9 619 aaKnown RBP16.09■□□□□ 0.17
GPC3-202ENST00000394299 ZHX1Q9UKY1 873 aaPredicted RBP16.09■□□□□ 0.17
GPC3-202ENST00000394299 H3BRB1 525 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 KRT19P08727 400 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 BRD2P25440 801 aaKnown RBP16.09■□□□□ 0.17
GPC3-202ENST00000394299 RAP1GAPP47736 663 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 BPIFB4P59827 614 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 NOMO3P69849 1222 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 ORC1Q13415 861 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 SPRYD7Q5W111 196 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 MMS22LQ6ZRQ5 1243 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 PPTC7Q8NI37 304 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 TUT1Q9H6E5 874 aaKnown RBP16.09■□□□□ 0.17
GPC3-202ENST00000394299 FAM204AQ9H8W3 233 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 VTA1Q9NP79 307 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 CPA4Q9UI42 421 aa16.09■□□□□ 0.17
GPC3-202ENST00000394299 MIF4GDA9UHW6 222 aaKnown RBP16.08■□□□□ 0.17
GPC3-202ENST00000394299 NFICP08651 508 aa16.08■□□□□ 0.17
GPC3-202ENST00000394299 TMEM191BP0C7N4 346 aa16.08■□□□□ 0.17
GPC3-202ENST00000394299 CENPCQ03188 943 aa16.08■□□□□ 0.17
GPC3-202ENST00000394299 TMEM62Q0P6H9 643 aa16.08■□□□□ 0.17
GPC3-202ENST00000394299 TRPC3Q13507 836 aa16.08■□□□□ 0.17
GPC3-202ENST00000394299 AMHR2Q16671 573 aa16.08■□□□□ 0.17
GPC3-202ENST00000394299 MON1BQ7L1V2 547 aa16.08■□□□□ 0.17
GPC3-202ENST00000394299 ANKRD23Q86SG2 305 aa16.08■□□□□ 0.17
GPC3-202ENST00000394299 PRELID2Q8N945 189 aa16.08■□□□□ 0.17
GPC3-202ENST00000394299 PIK3R5Q8WYR1 880 aa16.08■□□□□ 0.17
GPC3-202ENST00000394299 LENG1Q96BZ8 264 aaPredicted RBP16.08■□□□□ 0.17
GPC3-202ENST00000394299 JPH2Q9BR39 696 aaPredicted RBP16.08■□□□□ 0.17
GPC3-202ENST00000394299 IMPG2Q9BZV3 1241 aa16.08■□□□□ 0.17
GPC3-202ENST00000394299 WNT8AQ9H1J5 351 aa16.08■□□□□ 0.17
GPC3-202ENST00000394299 MED4Q9NPJ6 270 aa16.08■□□□□ 0.17
GPC3-202ENST00000394299 CISHQ9NSE2 258 aa16.08■□□□□ 0.17
GPC3-202ENST00000394299 MORF4L1Q9UBU8 362 aa16.08■□□□□ 0.17
GPC3-202ENST00000394299 PCDHA3Q9Y5H8 950 aa16.08■□□□□ 0.17
GPC3-202ENST00000394299 CEP350Q5VT06 3117 aa16.08■□□□□ 0.16
GPC3-202ENST00000394299 LACTBL1A8MY62 500 aa16.08■□□□□ 0.16
GPC3-202ENST00000394299 STRNO43815 780 aa16.08■□□□□ 0.16
GPC3-202ENST00000394299 TBXAS1P24557 533 aaPredicted RBP16.08■□□□□ 0.16
GPC3-202ENST00000394299 CTNNA1P35221 906 aaKnown RBP16.08■□□□□ 0.16
GPC3-202ENST00000394299 CDH8P55286 799 aa16.08■□□□□ 0.16
GPC3-202ENST00000394299 ZNF484Q5JVG2 852 aa16.08■□□□□ 0.16
GPC3-202ENST00000394299 TTC27Q6P3X3 843 aa16.08■□□□□ 0.16
GPC3-202ENST00000394299 ZNF677Q86XU0 584 aa16.08■□□□□ 0.16
GPC3-202ENST00000394299 EXOC8Q8IYI6 725 aa16.08■□□□□ 0.16
GPC3-202ENST00000394299 UBR7Q8N806 425 aa16.08■□□□□ 0.16
GPC3-202ENST00000394299 ARL8AQ96BM9 186 aa16.08■□□□□ 0.16
GPC3-202ENST00000394299 FAM81BQ96LP2 452 aa16.08■□□□□ 0.16
GPC3-202ENST00000394299 XYLT2Q9H1B5 865 aa16.08■□□□□ 0.16
GPC3-202ENST00000394299 ADAM22Q9P0K1 906 aa16.08■□□□□ 0.16
GPC3-202ENST00000394299 CNTN6Q9UQ52 1028 aa16.08■□□□□ 0.16
GPC3-202ENST00000394299 GINS2Q9Y248 185 aa16.08■□□□□ 0.16
GPC3-202ENST00000394299 RBM47A0AV96 593 aaKnown RBP16.07■□□□□ 0.16
GPC3-202ENST00000394299 BHMG1C9JSJ3 638 aaPredicted RBP16.07■□□□□ 0.16
GPC3-202ENST00000394299 KRT14P02533 472 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 KCNJ1P48048 391 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 MARCH8Q5T0T0 291 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 MTHFD1LQ6UB35 978 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 LINC01465Q8N7H1 131 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 CCDC26Q8TAB7 109 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 TFAP2BQ92481 460 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 CXCL16Q9H2A7 254 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 SLITRK6Q9H5Y7 841 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 TNFSF13BQ9Y275 285 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 STAG3L1P0CL83 205 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 ARF4P18085 180 aaPredicted RBP16.07■□□□□ 0.16
GPC3-202ENST00000394299 GCLCP48506 637 aaPredicted RBP16.07■□□□□ 0.16
GPC3-202ENST00000394299 LMAN1P49257 510 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 ACVR2BQ13705 512 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 GRB14Q14449 540 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 SGSM1Q2NKQ1 1148 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 CST9Q5W186 159 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 MAATS1Q7Z4T9 603 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 C2orf69Q8N8R5 385 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 HERPUD2Q9BSE4 406 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 TINF2Q9BSI4 451 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 RPF1Q9H9Y2 349 aaKnown RBP16.07■□□□□ 0.16
GPC3-202ENST00000394299 SETD4Q9NVD3 440 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 SIX4Q9UIU6 781 aa16.07■□□□□ 0.16
GPC3-202ENST00000394299 SCN4AP35499 1836 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms