RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 PLEKHA5Q9HAU0 1116 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 KLHL11Q9NVR0 708 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 G3BP2Q9UN86 482 aaKnown RBP13.31□□□□□ -0.28
CLTC-202ENST00000393043 PPP2R3BQ9Y5P8 575 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 OGTO15294 1046 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 PSMD3O43242 534 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 RALAP11233 206 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 TYK2P29597 1187 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 CARSP49589 748 aaKnown RBP13.31□□□□□ -0.28
CLTC-202ENST00000393043 LRRC14Q15048 493 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 EZH2Q15910 746 aaKnown RBP13.31□□□□□ -0.28
CLTC-202ENST00000393043 SV2CQ496J9 727 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 C4orf22Q6V702 233 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 THOC1Q96FV9 657 aaKnown RBP13.31□□□□□ -0.28
CLTC-202ENST00000393043 SGSM3Q96HU1 749 aa13.31□□□□□ -0.28
CLTC-202ENST00000393043 FAM237AA0A1B0GTK4 181 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 RPSAP08865 295 aaKnown RBP13.3□□□□□ -0.28
CLTC-202ENST00000393043 CASP2P42575 452 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 DGKDQ16760 1214 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 LRRC71Q8N4P6 559 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 A0A0A6YYK5 440 aaPredicted RBP13.3□□□□□ -0.28
CLTC-202ENST00000393043 FOXN3O00409 490 aaPredicted RBP13.3□□□□□ -0.28
CLTC-202ENST00000393043 CHUKO15111 745 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 AP5Z1O43299 807 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 GCKP35557 465 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 NPTX2P47972 431 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 EARS2Q5JPH6 523 aaKnown RBP13.3□□□□□ -0.28
CLTC-202ENST00000393043 MTHFD1LQ6UB35 978 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 AFG1LQ8WV93 481 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 ZSWIM1Q9BR11 485 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 DRC3Q9H069 523 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 THAP2Q9H0W7 228 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 MRPL40Q9NQ50 206 aaKnown RBP13.3□□□□□ -0.28
CLTC-202ENST00000393043 PSD3Q9NYI0 1048 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 SMARCAL1Q9NZC9 954 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 PAK5Q9P286 719 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 SUN2Q9UH99 717 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 EIF3HO15372 352 aaKnown RBP eCLIP13.3□□□□□ -0.285e-7■■■□□ 15.8
CLTC-202ENST00000393043 CFLARO15519 480 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 PI4K2AQ9BTU6 479 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 ZFATQ9P243 1243 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 CCDC22O60826 627 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 TMEM119Q4V9L6 283 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 SLC13A5Q86YT5 568 aaPredicted RBP13.3□□□□□ -0.28
CLTC-202ENST00000393043 RIBC1Q8N443 379 aaPredicted RBP13.3□□□□□ -0.28
CLTC-202ENST00000393043 PDZD8Q8NEN9 1154 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 TRIM15Q9C019 465 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 SIK2Q9H0K1 926 aa13.3□□□□□ -0.28
CLTC-202ENST00000393043 COILP38432 576 aaPredicted RBP13.29□□□□□ -0.28
CLTC-202ENST00000393043 PNPLA4P41247 253 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 RECQLP46063 649 aaPredicted RBP13.29□□□□□ -0.28
CLTC-202ENST00000393043 RGS7P49802 495 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 DCAF4L1Q3SXM0 396 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 NIPA1Q7RTP0 329 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 KRT35Q92764 455 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 ZKSCAN4Q969J2 545 aaPredicted RBP13.29□□□□□ -0.28
CLTC-202ENST00000393043 KIFC3Q9BVG8 833 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 AGO4Q9HCK5 861 aaKnown RBP13.29□□□□□ -0.28
CLTC-202ENST00000393043 PSMC3IPQ9P2W1 217 aaPredicted RBP13.29□□□□□ -0.28
CLTC-202ENST00000393043 SCOCQ9UIL1 159 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 ANKRD26Q9UPS8 1709 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 PSTPIP1O43586 416 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 CYP2C9P11712 490 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 GPD1P21695 349 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 CASP4P49662 377 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 ZNF484Q5JVG2 852 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 NOTUMQ6P988 496 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 CD302Q8IX05 232 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 FRMD8Q9BZ67 464 aaPredicted RBP13.29□□□□□ -0.28
CLTC-202ENST00000393043 PXMP2Q9NR77 195 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 TRAF3IP3Q9Y228 551 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 VCAM1P19320 739 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 SERPINB9P50453 376 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 CBWD2Q8IUF1 395 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 SPATA2LQ8IUW3 424 aaPredicted RBP13.29□□□□□ -0.28
CLTC-202ENST00000393043 SYTL5Q8TDW5 730 aaPredicted RBP13.29□□□□□ -0.28
CLTC-202ENST00000393043 HPDLQ96IR7 371 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 PDCD2LQ9BRP1 358 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 KIAA1683Q9H0B3 1180 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 RAB6BQ9NRW1 208 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 DCTN4Q9UJW0 460 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 RIC1Q4ADV7 1423 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 CCL15-CCL14A0A0B4J2E2 113 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 GSTA4O15217 222 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 GRIN3BO60391 1043 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 SPAG7O75391 227 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 WEE2P0C1S8 567 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 SLC26A2P50443 739 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 PRAMEP78395 509 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 YWHAHQ04917 246 aaPredicted RBP13.29□□□□□ -0.28
CLTC-202ENST00000393043 CCL15Q16663 113 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 ANKMY2Q8IV38 441 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 ELMOD1Q8N336 334 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 KIAA0895Q8NCT3 520 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 RAPGEF5Q92565 580 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 ZIM3Q96PE6 472 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 SLC13A1Q9BZW2 595 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 ARL2BPQ9Y2Y0 163 aa13.29□□□□□ -0.28
CLTC-202ENST00000393043 GNGT2O14610 69 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 ATMINO43313 823 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms