RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 WWP1Q9H0M0 922 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 DUOX2Q9NRD8 1548 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 MATN2O00339 956 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 MTRF1O75570 445 aaKnown RBP11.3□□□□□ -0.6
CLCN4-202ENST00000380833 TFRCP02786 760 aaKnown RBP11.3□□□□□ -0.6
CLCN4-202ENST00000380833 ENO1P06733 434 aaKnown RBP11.3□□□□□ -0.6
CLCN4-202ENST00000380833 ALOX5P09917 674 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 ADAM17P78536 824 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 ZNF618Q5T7W0 954 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 OR8H2Q8N162 312 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 PPP2R3CQ969Q6 453 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 APOL4Q9BPW4 351 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 TUBGCP2Q9BSJ2 902 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 PHACTR1Q9C0D0 580 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 KLHL4Q9C0H6 718 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 HMG20AQ9NP66 347 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 PLCL2Q9UPR0 1127 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 MED23Q9ULK4 1368 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 PODXLO00592 558 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 NDUFB5O43674 189 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 HSPA4LO95757 839 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 SPP2Q13103 211 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 MPP3Q13368 585 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 ARMC4Q5T2S8 1044 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 ERICH1Q86X53 443 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 GLMNQ92990 594 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 CNDP1Q96KN2 507 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 NFKBIL1Q9UBC1 381 aaPredicted RBP11.3□□□□□ -0.6
CLCN4-202ENST00000380833 NLRP11P59045 1033 aaKnown RBP11.3□□□□□ -0.6
CLCN4-202ENST00000380833 MTA1Q13330 715 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 LRRC14Q15048 493 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 PRR23CQ6ZRP0 262 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 GIPC3Q8TF64 312 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 HNRNPLLQ8WVV9 542 aaKnown RBP11.3□□□□□ -0.6
CLCN4-202ENST00000380833 ERP27Q96DN0 273 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 CITED4Q96RK1 184 aa11.3□□□□□ -0.6
CLCN4-202ENST00000380833 FARP1Q9Y4F1 1045 aaPredicted RBP11.3□□□□□ -0.6
CLCN4-202ENST00000380833 PDZK1P1A8MUH7 402 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 SLC16A4O15374 487 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 EFTUD2Q15029 972 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLCN4-202ENST00000380833 PRR23BQ6ZRT6 265 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 RMDN3Q96TC7 470 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 C1orf50Q9BV19 199 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 DSCC1Q9BVC3 393 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 ADCY9O60503 1353 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 THOC2Q8NI27 1593 aaKnown RBP11.29□□□□□ -0.6
CLCN4-202ENST00000380833 HUS1O60921 280 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 EFCAB14O75071 495 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 ZNF806P0C7X5 589 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 KPNA2P52292 529 aaKnown RBP11.29□□□□□ -0.6
CLCN4-202ENST00000380833 MTMR1Q13613 665 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 PPP2R5BQ15173 497 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 IL31Q6EBC2 164 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 APOA5Q6Q788 366 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 SYNE4Q8N205 404 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 SEPT5Q99719 369 aaPredicted RBP11.29□□□□□ -0.6
CLCN4-202ENST00000380833 TINF2Q9BSI4 451 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 TEX13BQ9BXU2 312 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 REXO4Q9GZR2 422 aaKnown RBP11.29□□□□□ -0.6
CLCN4-202ENST00000380833 SELENONQ9NZV5 590 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 CDV3Q9UKY7 258 aaKnown RBP11.29□□□□□ -0.6
CLCN4-202ENST00000380833 ZC3H4Q9UPT8 1303 aaKnown RBP11.29□□□□□ -0.6
CLCN4-202ENST00000380833 VWA5AO00534 786 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 ADCY6O43306 1168 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 AGTP01019 485 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 HOXD10P28358 340 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 ITGADQ13349 1161 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 ITGA7Q13683 1181 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 PKP1Q13835 747 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 BYSLQ13895 437 aaKnown RBP11.29□□□□□ -0.6
CLCN4-202ENST00000380833 LRRC8EQ6NSJ5 796 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 SWSAP1Q6NVH7 229 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 NEK5Q6P3R8 708 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 PDCD10Q9BUL8 212 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 EPS8L2Q9H6S3 715 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 NMT2O60551 498 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 NFKBIAP25963 317 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 PPP3CCP48454 512 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 GPSM2P81274 684 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 USP4Q13107 963 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 STXBP2Q15833 593 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 KDM7AQ6ZMT4 941 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 AKAP14Q86UN6 197 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 ZNF786Q8N393 782 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 HPS1Q92902 700 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 BRIP1Q9BX63 1249 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 MLXIPLQ9NP71 852 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 SCN3BQ9NY72 215 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 PI4KBQ9UBF8 816 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.29□□□□□ -0.6
CLCN4-202ENST00000380833 M0QYV0 167 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 COPEO14579 308 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 RAD51BO15315 384 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 KLHL18O94889 574 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 FLT3P36888 993 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 CRKP46108 304 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 SCNN1BP51168 640 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 TBC1D9BQ66K14 1250 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 IZUMO2Q6UXV1 221 aa11.29□□□□□ -0.6
CLCN4-202ENST00000380833 SNX32Q86XE0 403 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms