RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 RHPN2Q8IUC4 686 aa13.46□□□□□ -0.25
VPS16-202ENST00000380445 RBBP8NLQ8NC74 664 aaPredicted RBP13.46□□□□□ -0.25
VPS16-202ENST00000380445 CPA5Q8WXQ8 436 aa13.46□□□□□ -0.25
VPS16-202ENST00000380445 PIK3R5Q8WYR1 880 aa13.46□□□□□ -0.25
VPS16-202ENST00000380445 CYFIP2Q96F07 1278 aa13.46□□□□□ -0.25
VPS16-202ENST00000380445 BTBD6Q96KE9 485 aa13.46□□□□□ -0.25
VPS16-202ENST00000380445 ERVK-5Q9HDB9 667 aa13.46□□□□□ -0.25
VPS16-202ENST00000380445 PARP2Q9UGN5 583 aa13.46□□□□□ -0.25
VPS16-202ENST00000380445 PLAAQ9Y263 795 aa13.46□□□□□ -0.25
VPS16-202ENST00000380445 NUB1Q9Y5A7 615 aa13.46□□□□□ -0.25
VPS16-202ENST00000380445 ZBTB42B2RXF5 422 aa13.46□□□□□ -0.26
VPS16-202ENST00000380445 ACKR2O00590 384 aa13.46□□□□□ -0.26
VPS16-202ENST00000380445 KRT14P02533 472 aa13.46□□□□□ -0.26
VPS16-202ENST00000380445 HSD17B3P37058 310 aa13.46□□□□□ -0.26
VPS16-202ENST00000380445 MKRN4PQ13434 485 aaPredicted RBP13.46□□□□□ -0.26
VPS16-202ENST00000380445 CYP1B1Q16678 543 aa13.46□□□□□ -0.26
VPS16-202ENST00000380445 SGSM1Q2NKQ1 1148 aa13.46□□□□□ -0.26
VPS16-202ENST00000380445 TRIM50Q86XT4 487 aa13.46□□□□□ -0.26
VPS16-202ENST00000380445 JAMLQ86YT9 394 aa13.46□□□□□ -0.26
VPS16-202ENST00000380445 LRRC71Q8N4P6 559 aa13.46□□□□□ -0.26
VPS16-202ENST00000380445 FAM84AQ96KN4 292 aa13.46□□□□□ -0.26
VPS16-202ENST00000380445 FMO2Q99518 471 aa13.46□□□□□ -0.26
VPS16-202ENST00000380445 DPH5Q9H2P9 285 aa13.46□□□□□ -0.26
VPS16-202ENST00000380445 R3HDMLQ9H3Y0 253 aa13.46□□□□□ -0.26
VPS16-202ENST00000380445 ERAP1Q9NZ08 941 aa13.46□□□□□ -0.26
VPS16-202ENST00000380445 CPSF3Q9UKF6 684 aaKnown RBP13.46□□□□□ -0.26
VPS16-202ENST00000380445 SCINQ9Y6U3 715 aa13.46□□□□□ -0.26
VPS16-202ENST00000380445 UNCXA6NJT0 531 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 FAM189A1O60320 539 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 ASS1P00966 412 aaKnown RBP13.45□□□□□ -0.26
VPS16-202ENST00000380445 RRM1P23921 792 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 TRPC3Q13507 836 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 CCDC137Q6PK04 289 aaKnown RBP13.45□□□□□ -0.26
VPS16-202ENST00000380445 MPZL3Q6UWV2 235 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 TSHZ1Q6ZSZ6 1077 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 MON1BQ7L1V2 547 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 PRELID2Q8N945 189 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 SLC10A4Q96EP9 437 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 TRIM51Q9BSJ1 452 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 ZNFX1Q9P2E3 1918 aaKnown RBP13.45□□□□□ -0.26
VPS16-202ENST00000380445 HMGB1P1B2RPK0 211 aaPredicted RBP13.45□□□□□ -0.26
VPS16-202ENST00000380445 THAP12O43422 761 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 FNTAP49354 379 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 LAMC2Q13753 1193 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 SEZ6Q53EL9 994 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 TTMPQ5BVD1 217 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 LDLRAD1Q5T700 205 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 RUFY4Q6ZNE9 571 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 PHF13Q86YI8 300 aaPredicted RBP13.45□□□□□ -0.26
VPS16-202ENST00000380445 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.45□□□□□ -0.26
VPS16-202ENST00000380445 ARL8AQ96BM9 186 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 NEUROG2Q9H2A3 272 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 ADAM22Q9P0K1 906 aa13.45□□□□□ -0.26
VPS16-202ENST00000380445 SHOX2O60902 331 aaPredicted RBP13.44□□□□□ -0.26
VPS16-202ENST00000380445 TNFSF9P41273 254 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 NOMO3P69849 1222 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 C1QBPQ07021 282 aaKnown RBP13.44□□□□□ -0.26
VPS16-202ENST00000380445 TMEM132AQ24JP5 1023 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 ZNF484Q5JVG2 852 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 ATF7IP2Q5U623 682 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 EFCAB12Q6NXP0 572 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 AADACL2Q6P093 401 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 C12orf50Q8NA57 414 aaPredicted RBP13.44□□□□□ -0.26
VPS16-202ENST00000380445 UBLCP1Q8WVY7 318 aaPredicted RBP13.44□□□□□ -0.26
VPS16-202ENST00000380445 FAM212AQ96EL1 285 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 NFKBIZQ9BYH8 718 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 FAM129AQ9BZQ8 928 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 FZD8Q9H461 694 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 MROH7Q68CQ1 1323 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 TMEM191BP0C7N4 346 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 MYZAPP0CAP1 466 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 PROZP22891 400 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 YWHAEP62258 255 aaKnown RBP13.44□□□□□ -0.26
VPS16-202ENST00000380445 POU5F1BQ06416 359 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 CEP85LQ5SZL2 805 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 TMC3Q7Z5M5 1100 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 CCDC91Q7Z6B0 441 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 CCDC105Q8IYK2 499 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 GPRC5AQ8NFJ5 357 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 C18orf8Q96DM3 657 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 CAPS2Q9BXY5 557 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 TRIM31Q9BZY9 425 aa13.44□□□□□ -0.26
VPS16-202ENST00000380445 TTLL13PA6NNM8 815 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 INO80B-WBP1J3KQ70 363 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 FSCN2O14926 492 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 CST3P01034 146 aaPredicted RBP13.43□□□□□ -0.26
VPS16-202ENST00000380445 CALCAP01258 141 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 TNNC2P02585 160 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 COILP38432 576 aaPredicted RBP13.43□□□□□ -0.26
VPS16-202ENST00000380445 SKOR1P84550 965 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 DHX9Q08211 1270 aaKnown RBP13.43□□□□□ -0.26
VPS16-202ENST00000380445 PTP4A2Q12974 167 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 ARMCX2Q7L311 632 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 ZNF606Q8WXB4 792 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 ANKRD36BP1Q96IX9 119 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 ATP6V1G3Q96LB4 118 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 NLRP4Q96MN2 994 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 INO80BQ9C086 356 aaPredicted RBP13.43□□□□□ -0.26
VPS16-202ENST00000380445 MTMR12Q9C0I1 747 aa13.43□□□□□ -0.26
VPS16-202ENST00000380445 NIF3L1Q9GZT8 377 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms