RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 NIF3L1Q9GZT8 377 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 ALG6Q9Y672 507 aa21.24■□□□□ 0.99
PDLIM5-205ENST00000380180 TARSL2A2RTX5 802 aaKnown RBP21.23■□□□□ 0.99
PDLIM5-205ENST00000380180 MTA2O94776 668 aa21.23■□□□□ 0.99
PDLIM5-205ENST00000380180 ADAM17P78536 824 aa21.23■□□□□ 0.99
PDLIM5-205ENST00000380180 CDC42EP1Q00587 391 aa21.23■□□□□ 0.99
PDLIM5-205ENST00000380180 POU5F1Q01860 360 aaKnown RBP21.23■□□□□ 0.99
PDLIM5-205ENST00000380180 ZNF699Q32M78 642 aa21.23■□□□□ 0.99
PDLIM5-205ENST00000380180 HNRNPLLQ8WVV9 542 aaKnown RBP21.23■□□□□ 0.99
PDLIM5-205ENST00000380180 CPA5Q8WXQ8 436 aa21.23■□□□□ 0.99
PDLIM5-205ENST00000380180 CYFIP2Q96F07 1278 aa21.23■□□□□ 0.99
PDLIM5-205ENST00000380180 SELENOOQ9BVL4 669 aa21.23■□□□□ 0.99
PDLIM5-205ENST00000380180 GCOM2Q9BZD3 368 aaPredicted RBP21.23■□□□□ 0.99
PDLIM5-205ENST00000380180 ARHGAP39Q9C0H5 1083 aa21.23■□□□□ 0.99
PDLIM5-205ENST00000380180 CEP104O60308 925 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 TBC1D8O95759 1140 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 CYP1A1P04798 512 aaPredicted RBP21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 CFHP08603 1231 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 KRT19P08727 400 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 KYAT1Q16773 422 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 TMEM130Q8N3G9 435 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 ADPGKQ9BRR6 497 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 LRRC1Q9BTT6 524 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 NUP85Q9BW27 656 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 ASB7Q9H672 318 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 SIX4Q9UIU6 781 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 AKR1A1P14550 325 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 CD58P19256 250 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 ZNF132P52740 706 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 FSCN1Q16658 493 aaKnown RBP21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 C11orf63Q6NUN7 778 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 PAXIP1Q6ZW49 1069 aaPredicted RBP21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 C1orf127Q8N9H9 656 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 USP38Q8NB14 1042 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 TRPV1Q8NER1 839 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 CISHQ9NSE2 258 aa21.22■□□□□ 0.99
PDLIM5-205ENST00000380180 TMEM88BA6NKF7 163 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 DDX3YO15523 660 aaKnown RBP21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 TREHO43280 583 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 WEE2P0C1S8 567 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 PSMC4P43686 418 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 ZNF200P98182 395 aaPredicted RBP21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 NAA35Q5VZE5 725 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 CCDC70Q6NSX1 233 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 MCOLN2Q8IZK6 566 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 ZNF564Q8TBZ8 553 aaPredicted RBP21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 ACTRT1Q8TDG2 376 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 DNAJB3Q8WWF6 145 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 ACAP3Q96P50 834 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 OSMRQ99650 979 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 CNOT8Q9UFF9 292 aaKnown RBP21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 THAP12O43422 761 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 ERLIN1O75477 346 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 HOXA11P31270 313 aaPredicted RBP21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 SSTR3P32745 418 aaPredicted RBP21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 ASPAP45381 313 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 FCGRTP55899 365 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 CENPCQ03188 943 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 MESDQ14696 234 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 CYP4F22Q6NT55 531 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 ZNF606Q8WXB4 792 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 GPBP1L1Q9HC44 474 aaPredicted RBP21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 UVRAGQ9P2Y5 699 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 GABRQQ9UN88 632 aa21.21■□□□□ 0.99
PDLIM5-205ENST00000380180 CENPFP49454 3210 aa21.2■□□□□ 0.98
PDLIM5-205ENST00000380180 SPDYE4A6NLX3 237 aa21.2■□□□□ 0.98
PDLIM5-205ENST00000380180 TMEM110-MUSTN1A8MSY1 372 aa21.2■□□□□ 0.98
PDLIM5-205ENST00000380180 ZMYND10O75800 440 aa21.2■□□□□ 0.98
PDLIM5-205ENST00000380180 PURAQ00577 322 aaKnown RBP21.2■□□□□ 0.98
PDLIM5-205ENST00000380180 LONRF2Q1L5Z9 754 aa21.2■□□□□ 0.98
PDLIM5-205ENST00000380180 BEND6Q5SZJ8 279 aaPredicted RBP21.2■□□□□ 0.98
PDLIM5-205ENST00000380180 SCARA5Q6ZMJ2 495 aa21.2■□□□□ 0.98
PDLIM5-205ENST00000380180 TRIM72Q6ZMU5 477 aa21.2■□□□□ 0.98
PDLIM5-205ENST00000380180 CATSPER4Q7RTX7 472 aa21.2■□□□□ 0.98
PDLIM5-205ENST00000380180 PASD1Q8IV76 773 aa21.2■□□□□ 0.98
PDLIM5-205ENST00000380180 HDAC7Q8WUI4 952 aa21.2■□□□□ 0.98
PDLIM5-205ENST00000380180 HHIPL1Q96JK4 782 aa21.2■□□□□ 0.98
PDLIM5-205ENST00000380180 KATNAL1Q9BW62 490 aa21.2■□□□□ 0.98
PDLIM5-205ENST00000380180 NXF1Q9UBU9 619 aaKnown RBP21.2■□□□□ 0.98
PDLIM5-205ENST00000380180 ITGB3P05106 788 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 NSFP46459 744 aaKnown RBP21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 MRPS25P82663 173 aaKnown RBP21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 RALGAPA2Q2PPJ7 1873 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 ZNF394Q53GI3 561 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 MROH7Q68CQ1 1323 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 RASGEF1CQ8N431 466 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 SMC1BQ8NDV3 1235 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 CXorf38Q8TB03 319 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 BTBD6Q96KE9 485 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 TMEM59LQ9UK28 342 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 POLIQ9UNA4 740 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 DUSP11O75319 330 aaKnown RBP21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 NPTXRO95502 500 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 DARSP14868 501 aaKnown RBP21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 MCM3P25205 808 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 GRM5P41594 1212 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 NOMO3P69849 1222 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 WDR72Q3MJ13 1102 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 TRIB2Q92519 343 aa21.19■□□□□ 0.98
PDLIM5-205ENST00000380180 RPS6KC1Q96S38 1066 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms