RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 CCDC169A6NNP5 214 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 PES1O00541 588 aaKnown RBP13.38□□□□□ -0.27
VRK3-202ENST00000377011 MEFVO15553 781 aaPredicted RBP13.38□□□□□ -0.27
VRK3-202ENST00000377011 GUCY2CP25092 1073 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 MLH1P40692 756 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 VAV2P52735 878 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 ITIH3Q06033 890 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 STK4Q13043 487 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 GIT2Q14161 759 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 MAN2A1Q16706 1144 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 DEPTORQ8TB45 409 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 POF1BQ8WVV4 589 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 KIFAP3Q92845 792 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 MRPL38Q96DV4 380 aaKnown RBP13.38□□□□□ -0.27
VRK3-202ENST00000377011 CDK5RAP3Q96JB5 506 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 ZBTB45Q96K62 511 aaPredicted RBP13.38□□□□□ -0.27
VRK3-202ENST00000377011 SAMD11Q96NU1 681 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 FIZ1Q96SL8 496 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 VN1R3Q9BXE9 311 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 NT5C3AQ9H0P0 336 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 NHEJ1Q9H9Q4 299 aaPredicted RBP13.38□□□□□ -0.27
VRK3-202ENST00000377011 MED4Q9NPJ6 270 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 CWC15Q9P013 229 aaKnown RBP13.38□□□□□ -0.27
VRK3-202ENST00000377011 ARHGAP28Q9P2N2 729 aa13.38□□□□□ -0.27
VRK3-202ENST00000377011 POLR3GO15318 223 aaPredicted RBP13.37□□□□□ -0.27
VRK3-202ENST00000377011 LINC01565O15544 149 aa13.37□□□□□ -0.27
VRK3-202ENST00000377011 FGF18O76093 207 aa13.37□□□□□ -0.27
VRK3-202ENST00000377011 LCA5LO95447 670 aa13.37□□□□□ -0.27
VRK3-202ENST00000377011 PRLRP16471 622 aa13.37□□□□□ -0.27
VRK3-202ENST00000377011 FAM187BQ17R55 369 aa13.37□□□□□ -0.27
VRK3-202ENST00000377011 VWA3BQ502W6 1294 aa13.37□□□□□ -0.27
VRK3-202ENST00000377011 NOTUMQ6P988 496 aa13.37□□□□□ -0.27
VRK3-202ENST00000377011 KCNT2Q6UVM3 1135 aa13.37□□□□□ -0.27
VRK3-202ENST00000377011 ZNF572Q7Z3I7 529 aaPredicted RBP13.37□□□□□ -0.27
VRK3-202ENST00000377011 KIAA0895Q8NCT3 520 aa13.37□□□□□ -0.27
VRK3-202ENST00000377011 LARP4BQ92615 738 aaKnown RBP13.37□□□□□ -0.27
VRK3-202ENST00000377011 HAPLN2Q9GZV7 340 aa13.37□□□□□ -0.27
VRK3-202ENST00000377011 RSAD1Q9HA92 442 aa13.37□□□□□ -0.27
VRK3-202ENST00000377011 ABCB6Q9NP58 842 aa13.37□□□□□ -0.27
VRK3-202ENST00000377011 STK24Q9Y6E0 443 aa13.37□□□□□ -0.27
VRK3-202ENST00000377011 TRIOO75962 3097 aa13.37□□□□□ -0.27
VRK3-202ENST00000377011 TDRD15B5MCY1 1934 aaKnown RBP13.36□□□□□ -0.27
VRK3-202ENST00000377011 ERICH4A6NGS2 130 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 MYMKA6NI61 221 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 TULP2O00295 520 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 ACKR2O00590 384 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 ABLIM1O14639 778 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 ZC3H11AO75152 810 aaKnown RBP eCLIP13.36□□□□□ -0.27
VRK3-202ENST00000377011 ABL1P00519 1130 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 RB1P06400 928 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 SLC11A1P49279 550 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 SCNN1GP51170 649 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 KCNQ1P51787 676 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 BCAR1P56945 870 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 VSNL1P62760 191 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 DLX2Q07687 328 aaPredicted RBP13.36□□□□□ -0.27
VRK3-202ENST00000377011 EHHADHQ08426 723 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 KIF5AQ12840 1032 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 PRPF4BQ13523 1007 aaKnown RBP13.36□□□□□ -0.27
VRK3-202ENST00000377011 SKIV2LQ15477 1246 aaKnown RBP13.36□□□□□ -0.27
VRK3-202ENST00000377011 SPA17Q15506 151 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 NOMO2Q5JPE7 1267 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 ZBTB8OSQ8IWT0 167 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 ABI1Q8IZP0 508 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 LRRC43Q8N309 656 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 TMEM161BQ8NDZ6 487 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 TRIM58Q8NG06 486 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 FEZF2Q8TBJ5 459 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 FAM71BQ8TC56 605 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 C11orf84Q9BUA3 381 aaPredicted RBP13.36□□□□□ -0.27
VRK3-202ENST00000377011 TARS2Q9BW92 718 aaKnown RBP13.36□□□□□ -0.27
VRK3-202ENST00000377011 FGFBP2Q9BYJ0 223 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 PRMT7Q9NVM4 692 aaPredicted RBP13.36□□□□□ -0.27
VRK3-202ENST00000377011 SNTG2Q9NY99 539 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 ARL5CA6NH57 179 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 ITGA4P13612 1032 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 PLS3P13797 630 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 HNRNPH2P55795 449 aaKnown RBP13.36□□□□□ -0.27
VRK3-202ENST00000377011 HYAL1Q12794 435 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 MAPK6Q16659 721 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 SEZ6Q53EL9 994 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 SLC27A1Q6PCB7 646 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 DYMQ7RTS9 669 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 SLC39A11Q8N1S5 342 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 IFT74Q96LB3 600 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 TSG101Q99816 390 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 PAAF1Q9BRP4 392 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 PLVAPQ9BX97 442 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 NUCKS1Q9H1E3 243 aaKnown RBP13.36□□□□□ -0.27
VRK3-202ENST00000377011 PTPRHQ9HD43 1115 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 KMT5AQ9NQR1 393 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 LMCD1Q9NZU5 365 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 SIK3Q9Y2K2 1263 aa13.36□□□□□ -0.27
VRK3-202ENST00000377011 HIDE1A8MVS5 230 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 TISP43B9A030 160 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 PER2O15055 1255 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 GALTP07902 379 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 NMT1P30419 496 aaKnown RBP13.35□□□□□ -0.27
VRK3-202ENST00000377011 AXLP30530 894 aa13.35□□□□□ -0.27
VRK3-202ENST00000377011 RAB27AP51159 221 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms