RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 TNMDQ9H2S6 317 aa16.97■□□□□ 0.31
SDHB-201ENST00000375499 RPF1Q9H9Y2 349 aaKnown RBP16.97■□□□□ 0.31
SDHB-201ENST00000375499 PLEKHA5Q9HAU0 1116 aa16.97■□□□□ 0.31
SDHB-201ENST00000375499 OLFML3Q9NRN5 406 aa16.97■□□□□ 0.31
SDHB-201ENST00000375499 PANK4Q9NVE7 773 aa16.97■□□□□ 0.31
SDHB-201ENST00000375499 NOTCH4Q99466 2003 aa16.96■□□□□ 0.31
SDHB-201ENST00000375499 PDIA4P13667 645 aaKnown RBP16.96■□□□□ 0.31
SDHB-201ENST00000375499 RPL9P32969 192 aaKnown RBP16.96■□□□□ 0.31
SDHB-201ENST00000375499 ME1P48163 572 aa16.96■□□□□ 0.31
SDHB-201ENST00000375499 CLCN5P51795 746 aa16.96■□□□□ 0.31
SDHB-201ENST00000375499 CREMQ03060 361 aa16.96■□□□□ 0.31
SDHB-201ENST00000375499 RESP18Q5W5W9 173 aa16.96■□□□□ 0.31
SDHB-201ENST00000375499 JADE1Q6IE81 842 aa16.96■□□□□ 0.31
SDHB-201ENST00000375499 CRELD2Q6UXH1 353 aaPredicted RBP16.96■□□□□ 0.31
SDHB-201ENST00000375499 C15orf39Q6ZRI6 1047 aa16.96■□□□□ 0.31
SDHB-201ENST00000375499 PLCD3Q8N3E9 789 aa16.96■□□□□ 0.31
SDHB-201ENST00000375499 HVCN1Q96D96 273 aa16.96■□□□□ 0.31
SDHB-201ENST00000375499 FAM212AQ96EL1 285 aa16.96■□□□□ 0.31
SDHB-201ENST00000375499 SMOC2Q9H3U7 446 aa16.96■□□□□ 0.31
SDHB-201ENST00000375499 RCOR1Q9UKL0 485 aa16.96■□□□□ 0.31
SDHB-201ENST00000375499 CDY1Q9Y6F8 540 aa16.96■□□□□ 0.31
SDHB-201ENST00000375499 POLR2DO15514 142 aaKnown RBP16.95■□□□□ 0.3
SDHB-201ENST00000375499 PRPF6O94906 941 aaKnown RBP16.95■□□□□ 0.3
SDHB-201ENST00000375499 ASGR2P07307 311 aa16.95■□□□□ 0.3
SDHB-201ENST00000375499 LRPAP1P30533 357 aa16.95■□□□□ 0.3
SDHB-201ENST00000375499 OR1D2P34982 312 aa16.95■□□□□ 0.3
SDHB-201ENST00000375499 VARS2Q5ST30 1063 aaKnown RBP16.95■□□□□ 0.3
SDHB-201ENST00000375499 ADALQ6DHV7 355 aa16.95■□□□□ 0.3
SDHB-201ENST00000375499 CCDC149Q6ZUS6 474 aa16.95■□□□□ 0.3
SDHB-201ENST00000375499 SMG7Q92540 1137 aaKnown RBP16.95■□□□□ 0.3
SDHB-201ENST00000375499 SUSD3Q96L08 255 aa16.95■□□□□ 0.3
SDHB-201ENST00000375499 PLEKHA4Q9H4M7 779 aa16.95■□□□□ 0.3
SDHB-201ENST00000375499 AGO2Q9UKV8 859 aaKnown RBP16.95■□□□□ 0.3
SDHB-201ENST00000375499 UBQLN1Q9UMX0 589 aaKnown RBP16.95■□□□□ 0.3
SDHB-201ENST00000375499 PRR23AA6NEV1 266 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 TBC1D4O60343 1298 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 ZMYND10O75800 440 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 C1RP00736 705 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 ABCD1P33897 745 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 MCM4P33991 863 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 RAB33AQ14088 237 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 ATL3Q6DD88 541 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 ASTLQ6HA08 431 aaPredicted RBP16.94■□□□□ 0.3
SDHB-201ENST00000375499 EFCAB13Q8IY85 973 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 GRAMD1CQ8IYS0 662 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 ZDHHC14Q8IZN3 488 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 TDRD5Q8NAT2 981 aaKnown RBP16.94■□□□□ 0.3
SDHB-201ENST00000375499 HDAC7Q8WUI4 952 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 LEO1Q8WVC0 666 aaPredicted RBP16.94■□□□□ 0.3
SDHB-201ENST00000375499 POMGNT1Q8WZA1 660 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 NKD2Q969F2 451 aaPredicted RBP16.94■□□□□ 0.3
SDHB-201ENST00000375499 SAAL1Q96ER3 474 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 FAM84AQ96KN4 292 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 CBWD1Q9BRT8 395 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 CUEDC2Q9H467 287 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 WDR6Q9NNW5 1121 aaKnown RBP16.94■□□□□ 0.3
SDHB-201ENST00000375499 USTQ9Y2C2 406 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 NUB1Q9Y5A7 615 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 BACE2Q9Y5Z0 518 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 CLUHO75153 1309 aa16.94■□□□□ 0.3
SDHB-201ENST00000375499 WDR27A2RRH5 827 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 SYN3O14994 580 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 TRAPPC3O43617 180 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 C8AP07357 584 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 CYP3A5P20815 502 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 HOXD13P35453 343 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 AARSP49588 968 aaKnown RBP eCLIP16.93■□□□□ 0.3
SDHB-201ENST00000375499 ASIC1P78348 528 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 ROR1Q01973 937 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 MRPL58Q14197 206 aaKnown RBP16.93■□□□□ 0.3
SDHB-201ENST00000375499 KYAT1Q16773 422 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 SPATA1Q5VX52 437 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 PDXDC1Q6P996 788 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 ANKS3Q6ZW76 656 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 ASCL5Q7RTU5 278 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 CCDC65Q8IXS2 484 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 IQUBQ8NA54 791 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 ACCSQ96QU6 501 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 RHOBTB2Q9BYZ6 727 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 PRKD2Q9BZL6 878 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 BLZF1Q9H2G9 400 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 ZDHHC7Q9NXF8 308 aa16.93■□□□□ 0.3
SDHB-201ENST00000375499 TIMM13Q9Y5L4 95 aaPredicted RBP16.93■□□□□ 0.3
SDHB-201ENST00000375499 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.92■□□□□ 0.3
SDHB-201ENST00000375499 SPTLC1O15269 473 aa16.92■□□□□ 0.3
SDHB-201ENST00000375499 CCL16O15467 120 aa16.92■□□□□ 0.3
SDHB-201ENST00000375499 NTHL1P78549 312 aa16.92■□□□□ 0.3
SDHB-201ENST00000375499 EHHADHQ08426 723 aa16.92■□□□□ 0.3
SDHB-201ENST00000375499 TMEM132DQ14C87 1099 aa16.92■□□□□ 0.3
SDHB-201ENST00000375499 SCARA3Q6AZY7 606 aa16.92■□□□□ 0.3
SDHB-201ENST00000375499 SLFN12LQ6IEE8 588 aa16.92■□□□□ 0.3
SDHB-201ENST00000375499 SLC8B1Q6J4K2 584 aa16.92■□□□□ 0.3
SDHB-201ENST00000375499 CNNM4Q6P4Q7 775 aa16.92■□□□□ 0.3
SDHB-201ENST00000375499 SLC7A14Q8TBB6 771 aa16.92■□□□□ 0.3
SDHB-201ENST00000375499 MYADMQ96S97 322 aa16.92■□□□□ 0.3
SDHB-201ENST00000375499 C7orf25Q9BPX7 421 aa16.92■□□□□ 0.3
SDHB-201ENST00000375499 LIMD1Q9UGP4 676 aa16.92■□□□□ 0.3
SDHB-201ENST00000375499 DPP7Q9UHL4 492 aa16.92■□□□□ 0.3
SDHB-201ENST00000375499 FBXL5Q9UKA1 691 aa16.92■□□□□ 0.3
SDHB-201ENST00000375499 CFAP45Q9UL16 551 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms