RNA–Protein interactions for RNA: ENST00000373667.4

COL16A1-201, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-201ENST00000373667 SLC16A3O15427 465 aaKnown RBP20.52■□□□□ 0.88
COL16A1-201ENST00000373667 CXCL14O95715 111 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 FOSL2P15408 326 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 ERCC5P28715 1186 aaPredicted RBP20.52■□□□□ 0.88
COL16A1-201ENST00000373667 POLR2BP30876 1174 aaKnown RBP20.52■□□□□ 0.88
COL16A1-201ENST00000373667 TYRO3Q06418 890 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 CAMK1Q14012 370 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 FAM171A1Q5VUB5 890 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 TCERG1LQ5VWI1 586 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 PLPP4Q5VZY2 271 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 FOXR2Q6PJQ5 311 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 CD300LGQ6UXG3 332 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 TRAPPC11Q7Z392 1133 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 CEP57Q86XR8 500 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 C1orf127Q8N9H9 656 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 TCF25Q9BQ70 676 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 VN1R3Q9BXE9 311 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 GZF1Q9H116 711 aaPredicted RBP20.52■□□□□ 0.88
COL16A1-201ENST00000373667 MMRN2Q9H8L6 949 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 STK39Q9UEW8 545 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 ITGA11Q9UKX5 1188 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 MTCH2Q9Y6C9 303 aa20.52■□□□□ 0.88
COL16A1-201ENST00000373667 COL4A4P53420 1690 aaPredicted RBP20.51■□□□□ 0.87
COL16A1-201ENST00000373667 ANO9A1A5B4 782 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 SYCE3A1L190 88 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 PIRO00625 290 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 C2CD2LO14523 706 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 SOD2P04179 222 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 TRIM49P0CI25 452 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 TRIM49CP0CI26 452 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 IRS1P35568 1242 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 RBP5P82980 135 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 ELAVL2Q12926 359 aaKnown RBP20.51■□□□□ 0.87
COL16A1-201ENST00000373667 BFSP1Q12934 665 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 BIRC3Q13489 604 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 CT47A1Q5JQC4 288 aaPredicted RBP20.51■□□□□ 0.87
COL16A1-201ENST00000373667 DSTYKQ6XUX3 929 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 AUTS2Q8WXX7 1259 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 B3GALT6Q96L58 329 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 MED15Q96RN5 788 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 HERC2P3Q9BVR0 1158 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 LMCD1Q9NZU5 365 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 ARMCX3Q9UH62 379 aaPredicted RBP20.51■□□□□ 0.87
COL16A1-201ENST00000373667 PCDHGC5Q9Y5F6 944 aa20.51■□□□□ 0.87
COL16A1-201ENST00000373667 AP3M2P53677 418 aa20.5■□□□□ 0.87
COL16A1-201ENST00000373667 TRPC3Q13507 836 aa20.5■□□□□ 0.87
COL16A1-201ENST00000373667 SMC1AQ14683 1233 aaKnown RBP20.5■□□□□ 0.87
COL16A1-201ENST00000373667 USP41Q3LFD5 358 aa20.5■□□□□ 0.87
COL16A1-201ENST00000373667 TIGD5Q53EQ6 642 aa20.5■□□□□ 0.87
COL16A1-201ENST00000373667 DCAF17Q5H9S7 520 aaPredicted RBP20.5■□□□□ 0.87
COL16A1-201ENST00000373667 SCARA3Q6AZY7 606 aa20.5■□□□□ 0.87
COL16A1-201ENST00000373667 PDE12Q6L8Q7 609 aaKnown RBP20.5■□□□□ 0.87
COL16A1-201ENST00000373667 C11orf57Q6ZUT1 292 aaPredicted RBP20.5■□□□□ 0.87
COL16A1-201ENST00000373667 BORCS6Q96GS4 357 aa20.5■□□□□ 0.87
COL16A1-201ENST00000373667 DNAJC25Q9H1X3 360 aa20.5■□□□□ 0.87
COL16A1-201ENST00000373667 METTL14Q9HCE5 456 aaKnown RBP20.5■□□□□ 0.87
COL16A1-201ENST00000373667 NGRNQ9NPE2 291 aaKnown RBP20.5■□□□□ 0.87
COL16A1-201ENST00000373667 IKBKBO14920 756 aa20.49■□□□□ 0.87
COL16A1-201ENST00000373667 CLSTN1O94985 981 aa20.49■□□□□ 0.87
COL16A1-201ENST00000373667 GNA14O95837 355 aa20.49■□□□□ 0.87
COL16A1-201ENST00000373667 CST3P01034 146 aaPredicted RBP20.49■□□□□ 0.87
COL16A1-201ENST00000373667 URODP06132 367 aa20.49■□□□□ 0.87
COL16A1-201ENST00000373667 CCDC192P0DO97 292 aa20.49■□□□□ 0.87
COL16A1-201ENST00000373667 CTSAP10619 480 aa20.49■□□□□ 0.87
COL16A1-201ENST00000373667 GCLMP48507 274 aa20.49■□□□□ 0.87
COL16A1-201ENST00000373667 GLUD2P49448 558 aa20.49■□□□□ 0.87
COL16A1-201ENST00000373667 TAF6P49848 677 aa20.49■□□□□ 0.87
COL16A1-201ENST00000373667 LILRA4P59901 499 aa20.49■□□□□ 0.87
COL16A1-201ENST00000373667 CCDC85BQ15834 202 aaPredicted RBP20.49■□□□□ 0.87
COL16A1-201ENST00000373667 FRMD5Q7Z6J6 570 aa20.49■□□□□ 0.87
COL16A1-201ENST00000373667 PPM1EQ8WY54 764 aa20.49■□□□□ 0.87
COL16A1-201ENST00000373667 RIN2Q8WYP3 895 aaPredicted RBP20.49■□□□□ 0.87
COL16A1-201ENST00000373667 ZNF560Q96MR9 790 aa20.49■□□□□ 0.87
COL16A1-201ENST00000373667 TTPALQ9BTX7 342 aa20.49■□□□□ 0.87
COL16A1-201ENST00000373667 ZBP1Q9H171 429 aa20.49■□□□□ 0.87
COL16A1-201ENST00000373667 MRPL17Q9NRX2 175 aaKnown RBP20.49■□□□□ 0.87
COL16A1-201ENST00000373667 SIX4Q9UIU6 781 aa20.49■□□□□ 0.87
COL16A1-201ENST00000373667 FSCN2O14926 492 aa20.48■□□□□ 0.87
COL16A1-201ENST00000373667 STX10O60499 249 aa20.48■□□□□ 0.87
COL16A1-201ENST00000373667 C4BPAP04003 597 aaKnown RBP20.48■□□□□ 0.87
COL16A1-201ENST00000373667 POU3F3P20264 500 aaPredicted RBP20.48■□□□□ 0.87
COL16A1-201ENST00000373667 PNPLA4P41247 253 aa20.48■□□□□ 0.87
COL16A1-201ENST00000373667 CLDN10P78369 228 aa20.48■□□□□ 0.87
COL16A1-201ENST00000373667 SV2CQ496J9 727 aa20.48■□□□□ 0.87
COL16A1-201ENST00000373667 C1orf220Q5T0J3 134 aa20.48■□□□□ 0.87
COL16A1-201ENST00000373667 RBM23Q86U06 439 aaKnown RBP20.48■□□□□ 0.87
COL16A1-201ENST00000373667 SUSD3Q96L08 255 aa20.48■□□□□ 0.87
COL16A1-201ENST00000373667 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.47■□□□□ 0.87
COL16A1-201ENST00000373667 HIDE1A8MVS5 230 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 KPNA7A9QM74 516 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 SPTLC1O15269 473 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 EFEMP2O95967 443 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 PAX3P23760 479 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 TKTP29401 623 aaKnown RBP20.47■□□□□ 0.87
COL16A1-201ENST00000373667 ENPEPQ07075 957 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 PPP3CAQ08209 521 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 MYO1EQ12965 1108 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 ZSCAN23Q3MJ62 389 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 ANO6Q4KMQ2 910 aa20.47■□□□□ 0.87
COL16A1-201ENST00000373667 KIAA0319Q5VV43 1072 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms