RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 SLC30A1Q9Y6M5 507 aa18.84■□□□□ 0.61
SNX27-203ENST00000368843 KIAA0391O15091 583 aaKnown RBP18.84■□□□□ 0.61
SNX27-203ENST00000368843 PLA2R1Q13018 1463 aa18.84■□□□□ 0.61
SNX27-203ENST00000368843 SUPT3HB4E1H0 165 aa18.84■□□□□ 0.61
SNX27-203ENST00000368843 SUPT3HO75486 399 aa18.84■□□□□ 0.61
SNX27-203ENST00000368843 DPEP1P16444 411 aa18.84■□□□□ 0.61
SNX27-203ENST00000368843 SLC1A1P43005 524 aa18.84■□□□□ 0.61
SNX27-203ENST00000368843 MRFAP1Q9Y605 127 aa18.84■□□□□ 0.61
SNX27-203ENST00000368843 C17orf102A2RUQ5 167 aa18.84■□□□□ 0.61
SNX27-203ENST00000368843 CUL3Q13618 768 aa18.84■□□□□ 0.61
SNX27-203ENST00000368843 FAM161BQ96MY7 647 aa18.84■□□□□ 0.61
SNX27-203ENST00000368843 LATS2Q9NRM7 1088 aa18.84■□□□□ 0.61
SNX27-203ENST00000368843 APEX2Q9UBZ4 518 aa18.84■□□□□ 0.61
SNX27-203ENST00000368843 PDXKO00764 312 aa18.83■□□□□ 0.61
SNX27-203ENST00000368843 THPOP40225 353 aa18.83■□□□□ 0.61
SNX27-203ENST00000368843 OR9Q1Q8NGQ5 310 aa18.83■□□□□ 0.61
SNX27-203ENST00000368843 ENTPD7Q9NQZ7 604 aa18.83■□□□□ 0.61
SNX27-203ENST00000368843 CD274Q9NZQ7 290 aa18.83■□□□□ 0.61
SNX27-203ENST00000368843 XPO7Q9UIA9 1087 aaKnown RBP18.83■□□□□ 0.61
SNX27-203ENST00000368843 TRAF3IP3Q9Y228 551 aa18.83■□□□□ 0.61
SNX27-203ENST00000368843 ADGRA2Q96PE1 1338 aa18.83■□□□□ 0.61
SNX27-203ENST00000368843 VPS72Q15906 364 aa18.83■□□□□ 0.61
SNX27-203ENST00000368843 SHC4Q6S5L8 630 aa18.83■□□□□ 0.61
SNX27-203ENST00000368843 PTPRN2Q92932 1015 aa18.83■□□□□ 0.61
SNX27-203ENST00000368843 L3MBTL3Q96JM7 780 aaPredicted RBP18.83■□□□□ 0.61
SNX27-203ENST00000368843 ERAP1Q9NZ08 941 aa18.83■□□□□ 0.61
SNX27-203ENST00000368843 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.83■□□□□ 0.616e-7■■■□□ 16.5
SNX27-203ENST00000368843 TARBP1Q13395 1621 aaKnown RBP18.83■□□□□ 0.61
SNX27-203ENST00000368843 NR3C2P08235 984 aa18.83■□□□□ 0.61
SNX27-203ENST00000368843 RFC5P40937 340 aa18.83■□□□□ 0.61
SNX27-203ENST00000368843 PJA2O43164 708 aa18.83■□□□□ 0.6
SNX27-203ENST00000368843 RALBP11234 206 aa18.83■□□□□ 0.6
SNX27-203ENST00000368843 PPP2R2AP63151 447 aa18.83■□□□□ 0.6
SNX27-203ENST00000368843 MOV10L1Q9BXT6 1211 aaKnown RBP18.83■□□□□ 0.6
SNX27-203ENST00000368843 TAF1DQ9H5J8 278 aaPredicted RBP18.83■□□□□ 0.6
SNX27-203ENST00000368843 ABI2Q9NYB9 513 aaPredicted RBP18.83■□□□□ 0.6
SNX27-203ENST00000368843 FAM187AA6NFU0 413 aa18.83■□□□□ 0.6
SNX27-203ENST00000368843 NBPF26B4DH59 902 aa18.83■□□□□ 0.6
SNX27-203ENST00000368843 ZNF189O75820 626 aaPredicted RBP18.83■□□□□ 0.6
SNX27-203ENST00000368843 ALDH18A1P54886 795 aaKnown RBP18.83■□□□□ 0.6
SNX27-203ENST00000368843 DCAF6Q58WW2 860 aa18.83■□□□□ 0.6
SNX27-203ENST00000368843 NBPF10Q6P3W6 841 aaKnown RBP18.83■□□□□ 0.6
SNX27-203ENST00000368843 MMS22LQ6ZRQ5 1243 aa18.83■□□□□ 0.6
SNX27-203ENST00000368843 NBPF15Q8N660 670 aa18.83■□□□□ 0.6
SNX27-203ENST00000368843 RBBP8NLQ8NC74 664 aaPredicted RBP18.83■□□□□ 0.6
SNX27-203ENST00000368843 TMEM117Q9H0C3 514 aa18.83■□□□□ 0.6
SNX27-203ENST00000368843 NLRP11P59045 1033 aaKnown RBP18.83■□□□□ 0.6
SNX27-203ENST00000368843 PAN2Q504Q3 1202 aaKnown RBP18.83■□□□□ 0.6
SNX27-203ENST00000368843 CATSPERBQ9H7T0 1116 aa18.83■□□□□ 0.6
SNX27-203ENST00000368843 ALDH7A1P49419 539 aaKnown RBP18.82■□□□□ 0.6
SNX27-203ENST00000368843 STILQ15468 1287 aa18.82■□□□□ 0.6
SNX27-203ENST00000368843 P3H1Q32P28 736 aa18.82■□□□□ 0.6
SNX27-203ENST00000368843 PTRHD1Q6GMV3 140 aaKnown RBP18.82■□□□□ 0.6
SNX27-203ENST00000368843 SLC35G2Q8TBE7 412 aa18.82■□□□□ 0.6
SNX27-203ENST00000368843 AURKCQ9UQB9 309 aa18.82■□□□□ 0.6
SNX27-203ENST00000368843 VCPKMTQ9H867 229 aa18.82■□□□□ 0.6
SNX27-203ENST00000368843 ECT2Q9H8V3 914 aa18.82■□□□□ 0.6
SNX27-203ENST00000368843 AP2B1P63010 937 aa18.82■□□□□ 0.6
SNX27-203ENST00000368843 NOTUMQ6P988 496 aa18.82■□□□□ 0.6
SNX27-203ENST00000368843 YIPF3Q9GZM5 350 aa18.82■□□□□ 0.6
SNX27-203ENST00000368843 TMEM161AQ9NX61 479 aa18.82■□□□□ 0.6
SNX27-203ENST00000368843 ACTN3Q08043 901 aaPredicted RBP18.82■□□□□ 0.6
SNX27-203ENST00000368843 PDIA5Q14554 519 aa18.82■□□□□ 0.6
SNX27-203ENST00000368843 TDRD10Q5VZ19 366 aaKnown RBP18.82■□□□□ 0.6
SNX27-203ENST00000368843 FBXO38Q6PIJ6 1188 aa18.82■□□□□ 0.6
SNX27-203ENST00000368843 NT5C1AQ9BXI3 368 aa18.82■□□□□ 0.6
SNX27-203ENST00000368843 SPATS2LQ9NUQ6 558 aaKnown RBP18.82■□□□□ 0.6
SNX27-203ENST00000368843 NAGPAQ9UK23 515 aa18.82■□□□□ 0.6
SNX27-203ENST00000368843 ENTPD3O75355 529 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 ATP5HO75947 161 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 OCA2Q04671 838 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 RNPC3Q96LT9 517 aaKnown RBP18.81■□□□□ 0.6
SNX27-203ENST00000368843 AGBL1Q96MI9 1066 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 KLK14Q9P0G3 267 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 TULP4Q9NRJ4 1543 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 CEP152O94986 1710 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 A2ML1A8K2U0 1454 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 AP3B1O00203 1094 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 SARM1Q6SZW1 724 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 NUP93Q8N1F7 819 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 GPR63Q9BZJ6 419 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 DEFB129Q9H1M3 183 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 WEE2P0C1S8 567 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 PRKCQQ04759 706 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 ZBTB17Q13105 803 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 AMHR2Q16671 573 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 RINLQ6ZS11 566 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 ANGPT2O15123 496 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 ZC2HC1CQ53FD0 456 aaPredicted RBP18.81■□□□□ 0.6
SNX27-203ENST00000368843 ZRANB3Q5FWF4 1079 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 MTHFD1LQ6UB35 978 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 C16orf86Q6ZW13 317 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 ANO9A1A5B4 782 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 H0Y626 953 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 HSPA1AP0DMV8 641 aaKnown RBP18.81■□□□□ 0.6
SNX27-203ENST00000368843 HSPA1BP0DMV9 641 aaKnown RBP18.81■□□□□ 0.6
SNX27-203ENST00000368843 MAPRE2Q15555 327 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 ATG9AQ7Z3C6 839 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 TRIM48Q8IWZ4 208 aa18.81■□□□□ 0.6
SNX27-203ENST00000368843 APOL5Q9BWW9 433 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms