RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 ARMCX3Q9UH62 379 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 CORO2BQ9UQ03 480 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 B3GNT3Q9Y2A9 372 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 PER2O15055 1255 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 LSM8O95777 96 aaKnown RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 IL10P22301 178 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SCRN3Q0VDG4 424 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 ZNF827Q17R98 1081 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 RAB44Q7Z6P3 723 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 XXYLT1Q8NBI6 393 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 HM13Q8TCT9 377 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 ZBTB10Q96DT7 871 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 CCDC87Q9NVE4 849 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 JAK1P23458 1154 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 TAF1BQ53T94 588 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 ITPRIPL1Q6GPH6 555 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 C16orf62Q7Z3J2 963 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 FAM182AQ5T1J6 154 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 PEX5LQ8IYB4 626 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 KRT12Q99456 494 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SLC39A8Q9C0K1 460 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 ARPP21Q9UBL0 812 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SYNDIG1LA6NDD5 238 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 PIK3R2O00459 728 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 ZNF213O14771 459 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SIN3BO75182 1162 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SUPT7LO94864 414 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SCTRP47872 440 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 NR2C2P49116 596 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 OCLNQ16625 522 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 AARS2Q5JTZ9 985 aaKnown RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 DGKHQ86XP1 1220 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 CLEC4FQ8N1N0 589 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 TMCO6Q96DC7 493 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 GAD1Q99259 594 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 ISCUQ9H1K1 167 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 NQO1P15559 274 aaKnown RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 PDIA2Q13087 525 aaKnown RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SYT16Q17RD7 645 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 KLC2Q9H0B6 622 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 MED26O95402 600 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 CYP2E1P05181 493 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 GARTP22102 1010 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 ZNF557Q8N988 423 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 RDM1Q8NG50 284 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 KLHL31Q9H511 634 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 NRKQ7Z2Y5 1582 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 M6PRP20645 277 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 MAN2A1Q16706 1144 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SUCLA2Q9P2R7 463 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 RNF219Q5W0B1 726 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 FAM237AA0A1B0GTK4 181 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SRGAP2O75044 1071 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 UQCRBP14927 111 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 LSP1P33241 339 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 AOPEPQ8N6M6 819 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 RBM46Q8TBY0 533 aaKnown RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 GPT2Q8TD30 523 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 CNDP2Q96KP4 475 aaKnown RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 CBX8Q9HC52 389 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 PIPSLA2A3N6 862 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 TPPPO94811 219 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 ATF2P15336 505 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 IRF5Q13568 498 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 TRIM56Q9BRZ2 755 aaKnown RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 NPHS2Q9NP85 383 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 DMTF1Q9Y222 760 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 MYL3P08590 195 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 CHRM1P11229 460 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 BRAFP15056 766 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 PSMC5P62195 406 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 HSF2Q03933 536 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 RAD51Q06609 339 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 TIPARPQ7Z3E1 657 aaKnown RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SVOPQ8N4V2 548 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 BIRC8Q96P09 236 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 ZBTB21Q9ULJ3 1066 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 NPATQ14207 1427 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SLC22A1O15245 554 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 PRKCIP41743 596 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 LONRF1Q17RB8 773 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 FAM199XQ6PEV8 388 aaPredicted RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 MCOLN3Q8TDD5 553 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SH3KBP1Q96B97 665 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 OSBPL8Q9BZF1 889 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 PNPLA3Q9NST1 481 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 TRMT13Q9NUP7 481 aaKnown RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 CD3EAPO15446 510 aaKnown RBP3.94□□□□□ -1.78
SYNE1-207ENST00000367255 IFNA16P05015 189 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 HLA-DOAP06340 250 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 ARL4CP56559 192 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 CYGBQ8WWM9 190 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 NYXQ9GZU5 481 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 PRCPP42785 496 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 ELMSAN1Q6PJG2 1045 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 DISC1Q9NRI5 854 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 SLC4A4Q9Y6R1 1079 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 A0A1B0GTH6 734 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 NUDT19A8MXV4 375 aa3.94□□□□□ -1.78
SYNE1-207ENST00000367255 RPL17P18621 184 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms