RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 REPS2Q8NFH8 660 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 FAM151AQ8WW52 585 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 SNF8Q96H20 258 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 SLC24A3Q9HC58 644 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 HOMER3Q9NSC5 361 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 TBX20Q9UMR3 447 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 TLDC1Q6P9B6 456 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 TMEM161BQ8NDZ6 487 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 FLAD1Q8NFF5 587 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 DDX27Q96GQ7 796 aaKnown RBP11.26□□□□□ -0.61
SMC3-201ENST00000361804 NT5C1BQ96P26 610 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 TMEM206Q9H813 350 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 AGO4Q9HCK5 861 aaKnown RBP11.26□□□□□ -0.61
SMC3-201ENST00000361804 PARP2Q9UGN5 583 aa11.26□□□□□ -0.61
SMC3-201ENST00000361804 MRPL11Q9Y3B7 192 aaKnown RBP11.26□□□□□ -0.61
SMC3-201ENST00000361804 MYH9P35579 1960 aaKnown RBP11.26□□□□□ -0.61
SMC3-201ENST00000361804 UBE4BO95155 1302 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 WDR91A4D1P6 747 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 FDX1P10109 184 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 GZMAP12544 262 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 TARSP26639 723 aaKnown RBP11.25□□□□□ -0.61
SMC3-201ENST00000361804 RXRBP28702 533 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 GTF2BQ00403 316 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 CLEC16AQ2KHT3 1053 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 P3H1Q32P28 736 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 IZUMO3Q5VZ72 239 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 ANO5Q75V66 913 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 GSTA5Q7RTV2 222 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 RIPK3Q9Y572 518 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 FGFR1P11362 822 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 HARSP12081 509 aaKnown RBP11.25□□□□□ -0.61
SMC3-201ENST00000361804 NRLP54845 237 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 RPL7AP62424 266 aaKnown RBP11.25□□□□□ -0.61
SMC3-201ENST00000361804 SPDYCQ5MJ68 293 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 MFSD5Q6N075 450 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 MCOLN2Q8IZK6 566 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 FBXL13Q8NEE6 735 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 ZBTB45Q96K62 511 aaPredicted RBP11.25□□□□□ -0.61
SMC3-201ENST00000361804 ZNF570Q96NI8 536 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 FAM167BQ9BTA0 163 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 ZNF341Q9BYN7 854 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 ALG13Q9NP73 1137 aaKnown RBP11.25□□□□□ -0.61
SMC3-201ENST00000361804 STK24Q9Y6E0 443 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 RASA4BC9J798 803 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 HNRNPDLO14979 420 aaKnown RBP11.25□□□□□ -0.61
SMC3-201ENST00000361804 RASA4O43374 803 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 MYBL1P10243 752 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 HSPA6P17066 643 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 ATF7P17544 494 aaPredicted RBP11.25□□□□□ -0.61
SMC3-201ENST00000361804 COPS2P61201 443 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 EFTUD2Q15029 972 aaKnown RBP eCLIP11.25□□□□□ -0.611e-7■■■■■ 33.5
SMC3-201ENST00000361804 MIS18BP1Q6P0N0 1132 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 ZNF449Q6P9G9 518 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 CKAP2Q8WWK9 683 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 UTP4Q969X6 686 aaKnown RBP11.25□□□□□ -0.61
SMC3-201ENST00000361804 KLF6Q99612 283 aaPredicted RBP11.25□□□□□ -0.61
SMC3-201ENST00000361804 NKX1-2Q9UD57 310 aaPredicted RBP11.25□□□□□ -0.61
SMC3-201ENST00000361804 SYNPO2Q9UMS6 1093 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 CDH23Q9H251 3354 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 MYPNQ86TC9 1320 aa11.25□□□□□ -0.61
SMC3-201ENST00000361804 ITGBL1O95965 494 aaPredicted RBP11.24□□□□□ -0.61
SMC3-201ENST00000361804 ZNF394Q53GI3 561 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 BICD1Q96G01 975 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 NSRP1Q9H0G5 558 aaKnown RBP11.24□□□□□ -0.61
SMC3-201ENST00000361804 CCDC134Q9H6E4 229 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 NUMBLQ9Y6R0 609 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 MCM3APO60318 1980 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 A0A1W2PPM1 405 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 MTA2O94776 668 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 SUN1O94901 812 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 TAC1P20366 129 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 NOP14P78316 857 aaKnown RBP11.24□□□□□ -0.61
SMC3-201ENST00000361804 BNIP1Q12981 228 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 PKN2Q16513 984 aaKnown RBP11.24□□□□□ -0.61
SMC3-201ENST00000361804 GALNTL6Q49A17 601 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 TRMT10CQ7L0Y3 403 aaKnown RBP11.24□□□□□ -0.61
SMC3-201ENST00000361804 ANKMY2Q8IV38 441 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 TMEM109Q9BVC6 243 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 SAYSD1Q9NPB0 183 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 DNPEPQ9ULA0 475 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 ZMYND8Q9ULU4 1186 aaPredicted RBP11.24□□□□□ -0.61
SMC3-201ENST00000361804 PLA2G6O60733 806 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 ERFP50548 548 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 RPS6P62753 249 aaKnown RBP11.24□□□□□ -0.61
SMC3-201ENST00000361804 MIEF2Q96C03 454 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 RBM15Q96T37 977 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMC3-201ENST00000361804 MYLK2Q9H1R3 596 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 ETNK1Q9HBU6 452 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 KMT5AQ9NQR1 393 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 HAO1Q9UJM8 370 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 GOLGA8RI6L899 631 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 ZNF862O60290 1169 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 PEX10O60683 326 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 UNGP13051 313 aaPredicted RBP11.24□□□□□ -0.61
SMC3-201ENST00000361804 YY1P25490 414 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 GCAP28676 217 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 FSTL1Q12841 308 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 C12orf50Q8NA57 414 aaPredicted RBP11.24□□□□□ -0.61
SMC3-201ENST00000361804 ERP27Q96DN0 273 aa11.24□□□□□ -0.61
SMC3-201ENST00000361804 RUNDC3BQ96NL0 473 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms