RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 GRPEL1Q9HAV7 217 aa27.37■■□□□ 1.97
SSBP3-202ENST00000357475 ITGA11Q9UKX5 1188 aa27.37■■□□□ 1.97
SSBP3-202ENST00000357475 COQ4Q9Y3A0 265 aa27.37■■□□□ 1.97
SSBP3-202ENST00000357475 PIRO00625 290 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 XPOTO43592 962 aaKnown RBP27.36■■□□□ 1.97
SSBP3-202ENST00000357475 ARHGEF15O94989 841 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 SLC9A1P19634 815 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 UPP1Q16831 310 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 SPOPLQ6IQ16 392 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 FAM193BQ96PV7 902 aaPredicted RBP27.36■■□□□ 1.97
SSBP3-202ENST00000357475 RAD9AQ99638 391 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 INSL6Q9Y581 213 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 PODXLO00592 558 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 PMM2O15305 246 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 ITGB1P05556 798 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 LINC00271P0C7V0 271 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 SLC11A1P49279 550 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 CD300LGQ6UXG3 332 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 FBXL13Q8NEE6 735 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 HASPINQ8TF76 798 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 XYLT2Q9H1B5 865 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 RAB20Q9NX57 234 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 GCNT4Q9P109 453 aa27.36■■□□□ 1.97
SSBP3-202ENST00000357475 NLRC5Q86WI3 1866 aa27.35■■□□□ 1.97
SSBP3-202ENST00000357475 NT5C1B-RDH14C9J2C7 533 aa27.35■■□□□ 1.97
SSBP3-202ENST00000357475 SPTLC1O15269 473 aa27.35■■□□□ 1.97
SSBP3-202ENST00000357475 N4BP1O75113 896 aaKnown RBP27.35■■□□□ 1.97
SSBP3-202ENST00000357475 OR1G1P47890 313 aa27.35■■□□□ 1.97
SSBP3-202ENST00000357475 FILIP1LQ4L180 1135 aa27.35■■□□□ 1.97
SSBP3-202ENST00000357475 TMEM173Q86WV6 379 aaPredicted RBP27.35■■□□□ 1.97
SSBP3-202ENST00000357475 SP7Q8TDD2 431 aaPredicted RBP27.35■■□□□ 1.97
SSBP3-202ENST00000357475 INTS2Q9H0H0 1204 aaKnown RBP27.35■■□□□ 1.97
SSBP3-202ENST00000357475 APOBEC3GQ9HC16 384 aaKnown RBP27.35■■□□□ 1.97
SSBP3-202ENST00000357475 PRG3Q9Y2Y8 225 aaPredicted RBP27.35■■□□□ 1.97
SSBP3-202ENST00000357475 P4HA2O15460 535 aa27.34■■□□□ 1.97
SSBP3-202ENST00000357475 KIF4AO95239 1232 aa27.34■■□□□ 1.97
SSBP3-202ENST00000357475 PBX2P40425 430 aa27.34■■□□□ 1.97
SSBP3-202ENST00000357475 RBP5P82980 135 aa27.34■■□□□ 1.97
SSBP3-202ENST00000357475 TRPC3Q13507 836 aa27.34■■□□□ 1.97
SSBP3-202ENST00000357475 SYCP1Q15431 976 aa27.34■■□□□ 1.97
SSBP3-202ENST00000357475 FKBP15Q5T1M5 1219 aa27.34■■□□□ 1.97
SSBP3-202ENST00000357475 DPY19L2P1Q6NXN4 242 aa27.34■■□□□ 1.97
SSBP3-202ENST00000357475 SPRED2Q7Z698 418 aa27.34■■□□□ 1.97
SSBP3-202ENST00000357475 TDHQ8IZJ6 230 aa27.34■■□□□ 1.97
SSBP3-202ENST00000357475 SIK3Q9Y2K2 1263 aa27.34■■□□□ 1.97
SSBP3-202ENST00000357475 CHD9Q3L8U1 2897 aa27.33■■□□□ 1.97
SSBP3-202ENST00000357475 NRP1O14786 923 aa27.33■■□□□ 1.97
SSBP3-202ENST00000357475 GALTP07902 379 aa27.33■■□□□ 1.97
SSBP3-202ENST00000357475 PON1P27169 355 aa27.33■■□□□ 1.97
SSBP3-202ENST00000357475 BCAR1P56945 870 aa27.33■■□□□ 1.97
SSBP3-202ENST00000357475 LRMPQ12912 555 aa27.33■■□□□ 1.97
SSBP3-202ENST00000357475 BCL7CQ8WUZ0 217 aaPredicted RBP27.33■■□□□ 1.97
SSBP3-202ENST00000357475 TRIM5Q9C035 493 aa27.33■■□□□ 1.97
SSBP3-202ENST00000357475 SIX2Q9NPC8 291 aa27.33■■□□□ 1.97
SSBP3-202ENST00000357475 MARCH5Q9NX47 278 aa27.33■■□□□ 1.97
SSBP3-202ENST00000357475 YBX2Q9Y2T7 364 aaKnown RBP27.33■■□□□ 1.97
SSBP3-202ENST00000357475 GTPBP10A4D1E9 387 aaKnown RBP27.32■■□□□ 1.96
SSBP3-202ENST00000357475 EXOC3L4Q17RC7 722 aa27.32■■□□□ 1.96
SSBP3-202ENST00000357475 SPOUT1Q5T280 376 aaKnown RBP27.32■■□□□ 1.96
SSBP3-202ENST00000357475 GBP6Q6ZN66 633 aa27.32■■□□□ 1.96
SSBP3-202ENST00000357475 EHBP1Q8NDI1 1231 aa27.32■■□□□ 1.96
SSBP3-202ENST00000357475 RSPH1Q8WYR4 309 aa27.32■■□□□ 1.96
SSBP3-202ENST00000357475 TATDN2Q93075 761 aa27.32■■□□□ 1.96
SSBP3-202ENST00000357475 HPDLQ96IR7 371 aa27.32■■□□□ 1.96
SSBP3-202ENST00000357475 NUB1Q9Y5A7 615 aa27.32■■□□□ 1.96
SSBP3-202ENST00000357475 I3L4J1 428 aa27.31■■□□□ 1.96
SSBP3-202ENST00000357475 ASS1P00966 412 aaKnown RBP27.31■■□□□ 1.96
SSBP3-202ENST00000357475 RPL9P32969 192 aaKnown RBP27.31■■□□□ 1.96
SSBP3-202ENST00000357475 PBX1P40424 430 aa27.31■■□□□ 1.96
SSBP3-202ENST00000357475 GJB7Q6PEY0 223 aa27.31■■□□□ 1.96
SSBP3-202ENST00000357475 TRIM65Q6PJ69 517 aa27.31■■□□□ 1.96
SSBP3-202ENST00000357475 UROC1Q96N76 676 aa27.31■■□□□ 1.96
SSBP3-202ENST00000357475 CHD7Q9P2D1 2997 aa27.31■■□□□ 1.96
SSBP3-202ENST00000357475 POLIQ9UNA4 740 aa27.31■■□□□ 1.96
SSBP3-202ENST00000357475 EPHB6O15197 1021 aa27.31■■□□□ 1.96
SSBP3-202ENST00000357475 B3GAT3O94766 335 aa27.31■■□□□ 1.96
SSBP3-202ENST00000357475 ZNF75DP51815 510 aa27.31■■□□□ 1.96
SSBP3-202ENST00000357475 ARHGEF19Q8IW93 802 aa27.31■■□□□ 1.96
SSBP3-202ENST00000357475 FIBCD1Q8N539 461 aa27.31■■□□□ 1.96
SSBP3-202ENST00000357475 DDX27Q96GQ7 796 aaKnown RBP27.31■■□□□ 1.96
SSBP3-202ENST00000357475 ERGIC2Q96RQ1 377 aa27.31■■□□□ 1.96
SSBP3-202ENST00000357475 TMEM175Q9BSA9 504 aa27.31■■□□□ 1.96
SSBP3-202ENST00000357475 LSM14BQ9BX40 385 aaKnown RBP27.31■■□□□ 1.96
SSBP3-202ENST00000357475 AJAP1Q9UKB5 411 aaPredicted RBP27.31■■□□□ 1.96
SSBP3-202ENST00000357475 ALDH2P05091 517 aa27.3■■□□□ 1.96
SSBP3-202ENST00000357475 BRCC3P46736 316 aa27.3■■□□□ 1.96
SSBP3-202ENST00000357475 LILRA4P59901 499 aa27.3■■□□□ 1.96
SSBP3-202ENST00000357475 ZNF699Q32M78 642 aa27.3■■□□□ 1.96
SSBP3-202ENST00000357475 KCNT2Q6UVM3 1135 aa27.3■■□□□ 1.96
SSBP3-202ENST00000357475 LRRC52Q8N7C0 313 aa27.3■■□□□ 1.96
SSBP3-202ENST00000357475 COLGALT1Q8NBJ5 622 aa27.3■■□□□ 1.96
SSBP3-202ENST00000357475 PBX4Q9BYU1 374 aa27.3■■□□□ 1.96
SSBP3-202ENST00000357475 FAN1Q9Y2M0 1017 aa27.3■■□□□ 1.96
SSBP3-202ENST00000357475 LINC01553A4QN01 128 aa27.29■■□□□ 1.96
SSBP3-202ENST00000357475 CLSTN1O94985 981 aa27.29■■□□□ 1.96
SSBP3-202ENST00000357475 CA3P07451 260 aa27.29■■□□□ 1.96
SSBP3-202ENST00000357475 NOP14P78316 857 aaKnown RBP27.29■■□□□ 1.96
SSBP3-202ENST00000357475 CETN1Q12798 172 aa27.29■■□□□ 1.96
SSBP3-202ENST00000357475 SGSM1Q2NKQ1 1148 aa27.29■■□□□ 1.96
SSBP3-202ENST00000357475 PHLDB3Q6NSJ2 640 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms