RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 TRAPPC11Q7Z392 1133 aa19.31■□□□□ 0.68
PDLIM7-202ENST00000355841 CXorf38Q8TB03 319 aa19.31■□□□□ 0.68
PDLIM7-202ENST00000355841 ARMCX3Q9UH62 379 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-202ENST00000355841 AGAP1Q9UPQ3 857 aa19.31■□□□□ 0.68
PDLIM7-202ENST00000355841 ANO9A1A5B4 782 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 PIRO00625 290 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 GCLMP48507 274 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 ERVFC1P60507 584 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 CLDN10P78369 228 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 TCERG1LQ5VWI1 586 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 FUT10Q6P4F1 479 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 IRF2BP1Q8IU81 584 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 VPS52Q8N1B4 723 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 AUTS2Q8WXX7 1259 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 ELMO3Q96BJ8 720 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 SAMSN1Q9NSI8 373 aaKnown RBP19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 NUB1Q9Y5A7 615 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 REV3LO60673 3130 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 PLXNA4Q9HCM2 1894 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 SPTLC1O15269 473 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 CST3P01034 146 aaPredicted RBP19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 IRS1P35568 1242 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 BIRC3Q13489 604 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 TDRD10Q5VZ19 366 aaKnown RBP19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 DDX53Q86TM3 631 aaKnown RBP19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 GUCD1Q96NT3 240 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 CDX2Q99626 313 aaPredicted RBP19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 PUF60Q9UHX1 559 aaKnown RBP19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 ITGA11Q9UKX5 1188 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 NFE2L3Q9Y4A8 694 aa19.3■□□□□ 0.68
PDLIM7-202ENST00000355841 IGFBP4P22692 258 aa19.29■□□□□ 0.68
PDLIM7-202ENST00000355841 LILRA4P59901 499 aa19.29■□□□□ 0.68
PDLIM7-202ENST00000355841 TIGD5Q53EQ6 642 aa19.29■□□□□ 0.68
PDLIM7-202ENST00000355841 CT47A1Q5JQC4 288 aaPredicted RBP19.29■□□□□ 0.68
PDLIM7-202ENST00000355841 FAM171A1Q5VUB5 890 aa19.29■□□□□ 0.68
PDLIM7-202ENST00000355841 SV2AQ7L0J3 742 aa19.29■□□□□ 0.68
PDLIM7-202ENST00000355841 FRMD5Q7Z6J6 570 aa19.29■□□□□ 0.68
PDLIM7-202ENST00000355841 ENOX1Q8TC92 643 aaKnown RBP19.29■□□□□ 0.68
PDLIM7-202ENST00000355841 MYLIPQ8WY64 445 aa19.29■□□□□ 0.68
PDLIM7-202ENST00000355841 CNOT6LQ96LI5 555 aaKnown RBP19.29■□□□□ 0.68
PDLIM7-202ENST00000355841 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.29■□□□□ 0.681e-6■■■■■ 56
PDLIM7-202ENST00000355841 MTMR10Q9NXD2 777 aa19.29■□□□□ 0.68
PDLIM7-202ENST00000355841 SF3B1O75533 1304 aaKnown RBP eCLIP19.29■□□□□ 0.683e-7■■■■■ 40.8
PDLIM7-202ENST00000355841 COL4A4P53420 1690 aaPredicted RBP19.28■□□□□ 0.68
PDLIM7-202ENST00000355841 TMEM189-UBE2V1I3L0A0 370 aa19.28■□□□□ 0.68
PDLIM7-202ENST00000355841 C2CD2LO14523 706 aa19.28■□□□□ 0.68
PDLIM7-202ENST00000355841 PHACTR2O75167 634 aa19.28■□□□□ 0.68
PDLIM7-202ENST00000355841 FGFR1OPO95684 399 aaKnown RBP19.28■□□□□ 0.68
PDLIM7-202ENST00000355841 EFEMP2O95967 443 aa19.28■□□□□ 0.68
PDLIM7-202ENST00000355841 C4BPAP04003 597 aaKnown RBP19.28■□□□□ 0.68
PDLIM7-202ENST00000355841 USP37Q86T82 979 aa19.28■□□□□ 0.68
PDLIM7-202ENST00000355841 CEP57Q86XR8 500 aa19.28■□□□□ 0.68
PDLIM7-202ENST00000355841 AOPEPQ8N6M6 819 aa19.28■□□□□ 0.68
PDLIM7-202ENST00000355841 MICAL1Q8TDZ2 1067 aa19.28■□□□□ 0.68
PDLIM7-202ENST00000355841 SLC35C1Q96A29 364 aa19.28■□□□□ 0.68
PDLIM7-202ENST00000355841 TCF25Q9BQ70 676 aa19.28■□□□□ 0.68
PDLIM7-202ENST00000355841 TLR9Q9NR96 1032 aa19.28■□□□□ 0.68
PDLIM7-202ENST00000355841 CARNS1A5YM72 827 aa19.27■□□□□ 0.68
PDLIM7-202ENST00000355841 IKBKBO14920 756 aa19.27■□□□□ 0.68
PDLIM7-202ENST00000355841 VNN1O95497 513 aa19.27■□□□□ 0.68
PDLIM7-202ENST00000355841 CA8P35219 290 aa19.27■□□□□ 0.68
PDLIM7-202ENST00000355841 DEKP35659 375 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-202ENST00000355841 RBP5P82980 135 aa19.27■□□□□ 0.68
PDLIM7-202ENST00000355841 PLPP4Q5VZY2 271 aa19.27■□□□□ 0.68
PDLIM7-202ENST00000355841 TMC7Q7Z402 723 aa19.27■□□□□ 0.68
PDLIM7-202ENST00000355841 RNF168Q8IYW5 571 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-202ENST00000355841 THAP9Q9H5L6 903 aa19.27■□□□□ 0.68
PDLIM7-202ENST00000355841 METTL14Q9HCE5 456 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-202ENST00000355841 ENTPD7Q9NQZ7 604 aa19.27■□□□□ 0.68
PDLIM7-202ENST00000355841 FANCLQ9NW38 375 aa19.27■□□□□ 0.68
PDLIM7-202ENST00000355841 LZTS1Q9Y250 596 aa19.27■□□□□ 0.68
PDLIM7-202ENST00000355841 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-202ENST00000355841 LRRN2O75325 713 aa19.27■□□□□ 0.67
PDLIM7-202ENST00000355841 GNA14O95837 355 aa19.27■□□□□ 0.67
PDLIM7-202ENST00000355841 SOD2P04179 222 aa19.27■□□□□ 0.67
PDLIM7-202ENST00000355841 TKTP29401 623 aaKnown RBP19.27■□□□□ 0.67
PDLIM7-202ENST00000355841 MYL6P60660 151 aa19.27■□□□□ 0.67
PDLIM7-202ENST00000355841 MYL5Q02045 173 aa19.27■□□□□ 0.67
PDLIM7-202ENST00000355841 UBE3AQ05086 875 aa19.27■□□□□ 0.67
PDLIM7-202ENST00000355841 ZACNQ401N2 412 aa19.27■□□□□ 0.67
PDLIM7-202ENST00000355841 CBWD6Q4V339 395 aa19.27■□□□□ 0.67
PDLIM7-202ENST00000355841 CBWD3Q5JTY5 395 aa19.27■□□□□ 0.67
PDLIM7-202ENST00000355841 RTP2Q5QGT7 225 aa19.27■□□□□ 0.67
PDLIM7-202ENST00000355841 CBWD5Q5RIA9 395 aa19.27■□□□□ 0.67
PDLIM7-202ENST00000355841 NAT10Q9H0A0 1025 aaKnown RBP19.27■□□□□ 0.67
PDLIM7-202ENST00000355841 TIMM13Q9Y5L4 95 aaPredicted RBP19.27■□□□□ 0.67
PDLIM7-202ENST00000355841 MYO7AQ13402 2215 aa19.26■□□□□ 0.67
PDLIM7-202ENST00000355841 HIDE1A8MVS5 230 aa19.26■□□□□ 0.67
PDLIM7-202ENST00000355841 TAF6P49848 677 aa19.26■□□□□ 0.67
PDLIM7-202ENST00000355841 ZNF165P49910 485 aa19.26■□□□□ 0.67
PDLIM7-202ENST00000355841 MCCD1P59942 119 aaPredicted RBP19.26■□□□□ 0.67
PDLIM7-202ENST00000355841 TRPC3Q13507 836 aa19.26■□□□□ 0.67
PDLIM7-202ENST00000355841 NCOA4Q13772 614 aa19.26■□□□□ 0.67
PDLIM7-202ENST00000355841 NCAPHQ15003 741 aa19.26■□□□□ 0.67
PDLIM7-202ENST00000355841 C15orf39Q6ZRI6 1047 aa19.26■□□□□ 0.67
PDLIM7-202ENST00000355841 TRIM59Q8IWR1 403 aa19.26■□□□□ 0.67
PDLIM7-202ENST00000355841 TAS1R2Q8TE23 839 aa19.26■□□□□ 0.67
PDLIM7-202ENST00000355841 MRPL38Q96DV4 380 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-202ENST00000355841 HPDLQ96IR7 371 aa19.26■□□□□ 0.67
PDLIM7-202ENST00000355841 ZBP1Q9H171 429 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms