RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 SLC9A4Q6AI14 798 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 FIBCD1Q8N539 461 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 ESX1Q8N693 406 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 EFHBQ8N7U6 833 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 FUBP3Q96I24 572 aaKnown RBP eCLIP6.33□□□□□ -1.4
RFC1-201ENST00000349703 RHOVQ96L33 236 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 MS4A7Q9GZW8 240 aaPredicted RBP6.33□□□□□ -1.4
RFC1-201ENST00000349703 DDX47Q9H0S4 455 aaKnown RBP6.33□□□□□ -1.4
RFC1-201ENST00000349703 ACTR5Q9H9F9 607 aaPredicted RBP6.33□□□□□ -1.4
RFC1-201ENST00000349703 UNKLQ9H9P5 680 aaKnown RBP6.33□□□□□ -1.4
RFC1-201ENST00000349703 PCDHA3Q9Y5H8 950 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 FRMPD1Q5SYB0 1578 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 BICDL2A1A5D9 508 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 NDC80O14777 642 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 LARGE1O95461 756 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 FTCDO95954 541 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 POLBP06746 335 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 NR2F2P24468 414 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 VAV2P52735 878 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 GNGT1P63211 74 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 SNCBQ16143 134 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 KRT24Q2M2I5 525 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 IRAK1BP1Q5VVH5 260 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 NANOGNBQ7Z5D8 188 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 NBPF5PQ86XG9 351 aaPredicted RBP6.33□□□□□ -1.4
RFC1-201ENST00000349703 APLFQ8IW19 511 aaPredicted RBP6.33□□□□□ -1.4
RFC1-201ENST00000349703 AVL9Q8NBF6 648 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 RIPOR3Q96MK2 946 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 LDAHQ9H6V9 325 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 NCOA5Q9HCD5 579 aaKnown RBP6.33□□□□□ -1.4
RFC1-201ENST00000349703 CUTAO60888 179 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 ATXN3P54252 364 aaPredicted RBP6.33□□□□□ -1.4
RFC1-201ENST00000349703 GRM3Q14832 879 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 PLCL1Q15111 1095 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 NR0B2Q15466 257 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 CCDC57Q2TAC2 916 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 PGS1Q32NB8 556 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 ANKS4BQ8N8V4 417 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 ZBTB34Q8NCN2 500 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 PTPRN2Q92932 1015 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 DHX58Q96C10 678 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 PANX2Q96RD6 677 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 SLF1Q9BQI6 1058 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 MUC3BQ9H195 1237 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 ACAD9Q9H845 621 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 PTPRHQ9HD43 1115 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 SPATS2LQ9NUQ6 558 aaKnown RBP6.33□□□□□ -1.4
RFC1-201ENST00000349703 ZNF446Q9NWS9 450 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 MIS18AQ9NYP9 233 aa6.33□□□□□ -1.4
RFC1-201ENST00000349703 ANGEL1Q9UNK9 670 aaKnown RBP6.33□□□□□ -1.4
RFC1-201ENST00000349703 YTHDC2Q9H6S0 1430 aaKnown RBP6.33□□□□□ -1.4
RFC1-201ENST00000349703 DPPA5A6NC42 116 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 BMP15O95972 392 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 ABCB1P08183 1280 aaPredicted RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 ADD1P35611 737 aaKnown RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 IRX1P78414 480 aaPredicted RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 AMPD3Q01432 767 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 PTH1RQ03431 593 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 CCDC93Q567U6 631 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 BTBD8Q5XKL5 378 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 ANKS6Q68DC2 871 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 OVOS1Q6IE37 1185 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 ARMCX5Q6P1M9 558 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 WDR60Q8WVS4 1066 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 TRIM47Q96LD4 638 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 RMND1Q9NWS8 449 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 TLR7Q9NYK1 1049 aaKnown RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 CRYL1Q9Y2S2 319 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 TRBV23OR9-2A0A075B6M9 112 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 ZNF891A8MT65 544 aaPredicted RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 IFRD1O00458 451 aaPredicted RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 DHX15O43143 795 aaKnown RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 TACC1O75410 805 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 CCNDBP1O95273 360 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 GSTA2P09210 222 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 PECAM1P16284 738 aaPredicted RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 STAT3P40763 770 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 BCAT1P54687 386 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 COASYQ13057 564 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 ZNF460Q14592 562 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 RASA2Q15283 850 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 HEATR4Q86WZ0 1026 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 SDR16C5Q8N3Y7 309 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 CFAP36Q96G28 342 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 USP28Q96RU2 1077 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 LSM14BQ9BX40 385 aaKnown RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 OSBPL7Q9BZF2 842 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 NSRP1Q9H0G5 558 aaKnown RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 ABCB6Q9NP58 842 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 ZCCHC17Q9NP64 241 aaKnown RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 HEYLQ9NQ87 328 aaPredicted RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 SEL1LQ9UBV2 794 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 TMX2Q9Y320 296 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 N4BP3O15049 544 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 PRKCIP41743 596 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 LIG4P49917 911 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 UNC5CLQ8IV45 518 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 ARID3BQ8IVW6 561 aaPredicted RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 PEX5LQ8IYB4 626 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 LILRB2Q8N423 598 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms