RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 SPOUT1Q5T280 376 aaKnown RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 PHLDB3Q6NSJ2 640 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 UBA3Q8TBC4 463 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 ARHGEF37A1IGU5 675 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 TNPO2O14787 897 aaKnown RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 ARL4CP56559 192 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 MAPK7Q13164 816 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 ZNF662Q6ZS27 426 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 BZW1Q7L1Q6 419 aaKnown RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 APTXQ7Z2E3 356 aaKnown RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 ZBED8Q8IZ13 594 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 CASKIN2Q8WXE0 1202 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 OPTNQ96CV9 577 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 ITGB3P05106 788 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 ADORA2BP29275 332 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 FAF2Q96CS3 445 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 C9orf72Q96LT7 481 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 CAMKK2Q96RR4 588 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 ABT1Q9ULW3 272 aaKnown RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 GOLGA8MH3BSY2 632 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 PROSCO94903 275 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 LRIG3Q6UXM1 1119 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 IRF2BP2Q7Z5L9 587 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 CCDC117Q8IWD4 279 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 FBXO16Q8IX29 292 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 MBOAT7Q96N66 472 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 MTMR12Q9C0I1 747 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 GANQ9H2C0 597 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 GMNCA6NCL1 334 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 CLTAP09496 248 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 MYL6P60660 151 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 PIGHQ14442 188 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 GPRC5DQ9NZD1 345 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 PDE2AO00408 941 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 PIK3R2O00459 728 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 LYPLA2O95372 231 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 SLC12A2P55011 1212 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 JAG1P78504 1218 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 MRPS9P82933 396 aaKnown RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 RNASELQ05823 741 aaKnown RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 SYDE1Q6ZW31 735 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 PPFIBP2Q8ND30 876 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 DHX35Q9H5Z1 703 aaKnown RBP6.66□□□□□ -1.34
PRKDC-202ENST00000338368 INPP5FQ9Y2H2 1132 aa6.66□□□□□ -1.34
PRKDC-202ENST00000338368 RRN3P2A6NIE6 340 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 TLR2O60603 784 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 C6orf222P0C671 652 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-202ENST00000338368 CYP2C9P11712 490 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 FGFR4P22455 802 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 RGS7P49802 495 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 ITKQ08881 620 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 MCUR1Q96AQ8 359 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 IL18RAPO95256 599 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 AGTP01019 485 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 COILP38432 576 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-202ENST00000338368 IRAK1P51617 712 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 ZNF157P51786 506 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-202ENST00000338368 CENPCQ03188 943 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 PRPSAP1Q14558 356 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 CREG2Q8IUH2 290 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 SLC9A9Q8IVB4 645 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 KLHL29Q96CT2 875 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 NT5C1AQ9BXI3 368 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 SPDYE16A6NNV3 312 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-202ENST00000338368 EIF3EP60228 445 aaKnown RBP6.65□□□□□ -1.34
PRKDC-202ENST00000338368 VGLL4Q14135 290 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 SLC29A2Q14542 456 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 ZNF484Q5JVG2 852 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 RIOX2Q8IUF8 465 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 MTMR14Q8NCE2 650 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 KAT5Q92993 513 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 KLHL11Q9NVR0 708 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 PSD3Q9NYI0 1048 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 LRFN2Q9ULH4 789 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 ADCY3O60266 1144 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 PTGER2P43116 358 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 SIAH1Q8IUQ4 282 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 FBXO25Q8TCJ0 367 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 KLRG1Q96E93 195 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 PARK7Q99497 189 aaKnown RBP6.65□□□□□ -1.34
PRKDC-202ENST00000338368 MAGED2Q9UNF1 606 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-202ENST00000338368 STK38LQ9Y2H1 464 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 GLI1P08151 1106 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 GUCY1A3Q02108 690 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 NT5DC3Q86UY8 548 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 A0A087WZ62 844 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 IQANK1A0A1B0GTG1 560 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 KRT37O76014 449 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 RBP3P10745 1247 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 RARBP10826 455 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 INPP4AQ96PE3 977 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-202ENST00000338368 FDXACB1Q9BRP7 624 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-202ENST00000338368 EFCC1Q9HA90 598 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 MYPNQ86TC9 1320 aa6.65□□□□□ -1.34
PRKDC-202ENST00000338368 LAMTOR4Q0VGL1 99 aa6.65□□□□□ -1.35
PRKDC-202ENST00000338368 STAP1Q9ULZ2 295 aa6.65□□□□□ -1.35
PRKDC-202ENST00000338368 SNED1Q8TER0 1413 aa6.65□□□□□ -1.35
PRKDC-202ENST00000338368 ZSCAN5CA6NGD5 496 aaPredicted RBP6.65□□□□□ -1.35
PRKDC-202ENST00000338368 MYO1CO00159 1063 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms