RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 POU5F1Q01860 360 aaKnown RBP18.14■□□□□ 0.5
DDX41-201ENST00000330503 TMEM62Q0P6H9 643 aa18.14■□□□□ 0.5
DDX41-201ENST00000330503 SREBF2Q12772 1141 aa18.14■□□□□ 0.5
DDX41-201ENST00000330503 C11orf63Q6NUN7 778 aa18.14■□□□□ 0.5
DDX41-201ENST00000330503 CXorf38Q8TB03 319 aa18.14■□□□□ 0.5
DDX41-201ENST00000330503 ACTRT1Q8TDG2 376 aa18.14■□□□□ 0.5
DDX41-201ENST00000330503 SOCS4Q8WXH5 440 aa18.14■□□□□ 0.5
DDX41-201ENST00000330503 CPA5Q8WXQ8 436 aa18.14■□□□□ 0.5
DDX41-201ENST00000330503 CYFIP2Q96F07 1278 aa18.14■□□□□ 0.5
DDX41-201ENST00000330503 SCLT1Q96NL6 688 aa18.14■□□□□ 0.5
DDX41-201ENST00000330503 NIF3L1Q9GZT8 377 aa18.14■□□□□ 0.5
DDX41-201ENST00000330503 ZMYND10O75800 440 aa18.14■□□□□ 0.49
DDX41-201ENST00000330503 SASH3O75995 380 aa18.14■□□□□ 0.49
DDX41-201ENST00000330503 GNA15P30679 374 aa18.14■□□□□ 0.49
DDX41-201ENST00000330503 JADE1Q6IE81 842 aa18.14■□□□□ 0.49
DDX41-201ENST00000330503 MCOLN2Q8IZK6 566 aa18.14■□□□□ 0.49
DDX41-201ENST00000330503 RASGEF1CQ8N431 466 aa18.14■□□□□ 0.49
DDX41-201ENST00000330503 TRPV1Q8NER1 839 aa18.14■□□□□ 0.49
DDX41-201ENST00000330503 ZNF653Q96CK0 615 aa18.14■□□□□ 0.49
DDX41-201ENST00000330503 NUP85Q9BW27 656 aa18.14■□□□□ 0.49
DDX41-201ENST00000330503 AP5M1Q9H0R1 490 aa18.14■□□□□ 0.49
DDX41-201ENST00000330503 OGFRQ9NZT2 677 aa18.14■□□□□ 0.49
DDX41-201ENST00000330503 DMGDHQ9UI17 866 aaKnown RBP18.14■□□□□ 0.49
DDX41-201ENST00000330503 SMIM35A0A1B0GVV1 85 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 ATP8B1O43520 1251 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 CA12O43570 354 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 CLSTN1O94985 981 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 MYL3P08590 195 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 HOXA11P31270 313 aaPredicted RBP18.13■□□□□ 0.49
DDX41-201ENST00000330503 SSTR3P32745 418 aaPredicted RBP18.13■□□□□ 0.49
DDX41-201ENST00000330503 C1orf127Q8N9H9 656 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 SELENOOQ9BVL4 669 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 FUT8Q9BYC5 575 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 CYP2C9P11712 490 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 ASPAP45381 313 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 CPT1AP50416 773 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 ZNF200P98182 395 aaPredicted RBP18.13■□□□□ 0.49
DDX41-201ENST00000330503 ZNF699Q32M78 642 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 DCAF12L1Q5VU92 463 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 NAA35Q5VZE5 725 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 BTBD6Q96KE9 485 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 HINFPQ9BQA5 517 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 CISHQ9NSE2 258 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 CNOT8Q9UFF9 292 aaKnown RBP18.13■□□□□ 0.49
DDX41-201ENST00000330503 POLIQ9UNA4 740 aa18.13■□□□□ 0.49
DDX41-201ENST00000330503 ERLIN2O94905 339 aa18.12■□□□□ 0.49
DDX41-201ENST00000330503 WEE2P0C1S8 567 aa18.12■□□□□ 0.49
DDX41-201ENST00000330503 CENPCQ03188 943 aa18.12■□□□□ 0.49
DDX41-201ENST00000330503 MESDQ14696 234 aa18.12■□□□□ 0.49
DDX41-201ENST00000330503 KYAT1Q16773 422 aa18.12■□□□□ 0.49
DDX41-201ENST00000330503 CCNI2Q6ZMN8 369 aaPredicted RBP18.12■□□□□ 0.49
DDX41-201ENST00000330503 CPNE8Q86YQ8 564 aa18.12■□□□□ 0.49
DDX41-201ENST00000330503 ZNF564Q8TBZ8 553 aaPredicted RBP18.12■□□□□ 0.49
DDX41-201ENST00000330503 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.12■□□□□ 0.494e-9■■□□□ 12.5
DDX41-201ENST00000330503 ARHGAP39Q9C0H5 1083 aa18.12■□□□□ 0.49
DDX41-201ENST00000330503 ASB7Q9H672 318 aa18.12■□□□□ 0.49
DDX41-201ENST00000330503 UVRAGQ9P2Y5 699 aa18.12■□□□□ 0.49
DDX41-201ENST00000330503 ABT1Q9ULW3 272 aaKnown RBP18.12■□□□□ 0.49
DDX41-201ENST00000330503 L1RE1Q9UN81 338 aa18.12■□□□□ 0.49
DDX41-201ENST00000330503 TMEM110-MUSTN1A8MSY1 372 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 ERLIN1O75477 346 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 CD58P19256 250 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 NOMO3P69849 1222 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 CDC42EP1Q00587 391 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 SLC7A5Q01650 507 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 ZNF606Q8WXB4 792 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 RPS6KC1Q96S38 1066 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 ZSWIM1Q9BR11 485 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 GCOM2Q9BZD3 368 aaPredicted RBP18.11■□□□□ 0.49
DDX41-201ENST00000330503 TREHO43280 583 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 THAP12O43422 761 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 COMTP21964 271 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 TRIM72Q6ZMU5 477 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 MON1BQ7L1V2 547 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 PASD1Q8IV76 773 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 DNAJB3Q8WWF6 145 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 ALG3Q92685 438 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 ACAP3Q96P50 834 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 AVENQ9NQS1 362 aaPredicted RBP18.11■□□□□ 0.49
DDX41-201ENST00000330503 GINS2Q9Y248 185 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 MROH7Q68CQ1 1323 aa18.11■□□□□ 0.49
DDX41-201ENST00000330503 KRT19P08727 400 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 FSCN1Q16658 493 aaKnown RBP18.1■□□□□ 0.49
DDX41-201ENST00000330503 GLE1Q53GS7 698 aaKnown RBP18.1■□□□□ 0.49
DDX41-201ENST00000330503 C2CD6Q53TS8 623 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 LLGL2Q6P1M3 1020 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 SCARA5Q6ZMJ2 495 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 PHLDB2Q86SQ0 1253 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 CD101Q93033 1021 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 OSMRQ99650 979 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 TTC7AQ9ULT0 858 aaPredicted RBP18.1■□□□□ 0.49
DDX41-201ENST00000330503 GABRQQ9UN88 632 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 NOC2LQ9Y3T9 749 aaKnown RBP18.1■□□□□ 0.49
DDX41-201ENST00000330503 MYADML2A6NDP7 307 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 PGRMC1O00264 195 aaKnown RBP18.1■□□□□ 0.49
DDX41-201ENST00000330503 ITGB3P05106 788 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 MYBL2P10244 700 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 DARSP14868 501 aaKnown RBP18.1■□□□□ 0.49
DDX41-201ENST00000330503 RRM1P23921 792 aa18.1■□□□□ 0.49
DDX41-201ENST00000330503 MCM3P25205 808 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms