RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	ABCD1	P33897	745 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	CDR2	Q01850	454 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	TNFAIP2	Q03169	654 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	TRADD	Q15628	312 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	PRAMEF19	Q5SWL8	479 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	CEP128	Q6ZU80	1094 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	NOP9	Q86U38	636 aa	Known RBP	12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	CREG2	Q8IUH2	290 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	OSMR	Q99650	979 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	TIPIN	Q9BVW5	301 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	IP6K2	Q9UHH9	426 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	ARFGEF2	Q9Y6D5	1785 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	ROBO3	Q96MS0	1386 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	ZNF541	Q9H0D2	1346 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	HMGB1P1	B2RPK0	211 aa	Predicted RBP	12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	SLC25A27	O95847	323 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	MYBL2	P10244	700 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	UBA1	P22314	1058 aa	Known RBP	12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	MAP2K2	P36507	400 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	ALDH5A1	P51649	535 aa	Predicted RBP	12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	FKBP1A	P62942	108 aa	Known RBP	12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	SLC29A2	Q14542	456 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	FKBP1C	Q5VVH2	108 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	BTNL9	Q6UXG8	535 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	PPM1N	Q8N819	430 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	SREK1	Q8WXA9	508 aa	Known RBP	12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	TBC1D31	Q96DN5	1066 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	HPDL	Q96IR7	371 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	AGAP3	Q96P47	875 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	BEGAIN	Q9BUH8	593 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771	NIF3L1	Q9GZT8	377 aa		12.52	□□□□□ -0.4
DDR1-223	ENST00000324771		I3L4J1	428 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	OGT	O15294	1046 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	CST8	O60676	142 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	MT-ND3	P03897	115 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	LAMTOR4	Q0VGL1	99 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	P3H1	Q32P28	736 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	C6orf163	Q5TEZ5	329 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	CENPU	Q71F23	418 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	MMGT1	Q8N4V1	131 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	CCDC197	Q8NCU1	140 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	ASAP3	Q8TDY4	903 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	TTC17	Q96AE7	1141 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	ATP6V1G3	Q96LB4	118 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	TOM1L1	O75674	476 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	ADCYAP1R1	P41586	468 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	ACOT1	Q86TX2	421 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	PPM1E	Q8WY54	764 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	LBHD1	Q9BQE6	289 aa	Predicted RBP	12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	GPATCH2L	Q9NWQ4	482 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	UVRAG	Q9P2Y5	699 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	SALL4	Q9UJQ4	1053 aa		12.52	□□□□□ -0.41
DDR1-223	ENST00000324771	ERF	P50548	548 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	SARNP	P82979	210 aa	Known RBP	12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	ACAD10	Q6JQN1	1059 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	XRRA1	Q6P2D8	792 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	ZNF449	Q6P9G9	518 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	APTX	Q7Z2E3	356 aa	Known RBP	12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	VPS52	Q8N1B4	723 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	ATP8B4	Q8TF62	1192 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	MCUR1	Q96AQ8	359 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	ATXN7L3B	Q96GX2	97 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	WRAP73	Q9P2S5	460 aa	Predicted RBP	12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	GTF3C4	Q9UKN8	822 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	PHF20L1	A8MW92	1017 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771		H3BRB1	525 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	NDC80	O14777	642 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	MARCKSL1	P49006	195 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	E2F5	Q15329	346 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	METTL7B	Q6UX53	244 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	ARMCX2	Q7L311	632 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	ERP44	Q9BS26	406 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	TUT1	Q9H6E5	874 aa	Known RBP	12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	PDGFC	Q9NRA1	345 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	ASNSD1	Q9NWL6	643 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	HES2	Q9Y543	173 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771		M0R2N6	131 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	BNIP3L	O60238	219 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	PHLPP1	O60346	1717 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	RFC5	P40937	340 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	CDK17	Q00537	523 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	RCN2	Q14257	317 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	C6orf118	Q5T5N4	469 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	MEI1	Q5TIA1	1274 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	CATSPERG	Q6ZRH7	1159 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	PALB2	Q86YC2	1186 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	SLC13A5	Q86YT5	568 aa	Predicted RBP	12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	SNED1	Q8TER0	1413 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	SCYL1	Q96KG9	808 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	CFAP57	Q96MR6	1250 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	CAMKK2	Q96RR4	588 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	C10orf88	Q9H8K7	445 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	METTL5	Q9NRN9	209 aa	Known RBP	12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	CISH	Q9NSE2	258 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	FIS1	Q9Y3D6	152 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	UBIAD1	Q9Y5Z9	338 aa		12.51	□□□□□ -0.41
DDR1-223	ENST00000324771	PIK3CD	O00329	1044 aa		12.5	□□□□□ -0.41
DDR1-223	ENST00000324771	TRIM66	O15016	1216 aa		12.5	□□□□□ -0.41
DDR1-223	ENST00000324771	GBP1	P32455	592 aa		12.5	□□□□□ -0.41

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