RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 HIST1H2ADP20671 130 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 ATICP31939 592 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 FOXO4P98177 505 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 ZNF543Q08ER8 600 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 PDK1Q15118 436 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 PTGISQ16647 500 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 KYNUQ16719 465 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 XRRA1Q6P2D8 792 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 KDM7AQ6ZMT4 941 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 TRIM69Q86WT6 500 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 HIST1H2AHQ96KK5 128 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 PPP1R16BQ96T49 567 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 HIST1H2AJQ99878 128 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 H2AFJQ9BTM1 129 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 L2HGDHQ9H9P8 463 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 RAB6BQ9NRW1 208 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 DDX28Q9NUL7 540 aaKnown RBP19.94■□□□□ 0.78
UBE2N-201ENST00000318066 NDFIP2Q9NV92 336 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 NYAP2Q9P242 653 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 SRP68Q9UHB9 627 aaKnown RBP19.94■□□□□ 0.78
UBE2N-201ENST00000318066 FAM32AQ9Y421 112 aaKnown RBP19.94■□□□□ 0.78
UBE2N-201ENST00000318066 TNPO2O14787 897 aaKnown RBP19.94■□□□□ 0.78
UBE2N-201ENST00000318066 MAFGO15525 162 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 RAD9BQ6WBX8 426 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 STOX1Q6ZVD7 989 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 SZRD1Q7Z422 152 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 ADCK1Q86TW2 530 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 CCNJLQ8IV13 435 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 SLC44A5Q8NCS7 719 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 LPAR1Q92633 364 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 NPHS2Q9NP85 383 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 TMEM120BA0PK00 339 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 PRKCBP05771 671 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 MYL2P10916 166 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 RFC5P40937 340 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 ARL8AQ96BM9 186 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 FOPNLQ96NB1 174 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 XPO7Q9UIA9 1087 aaKnown RBP19.94■□□□□ 0.78
UBE2N-201ENST00000318066 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.94■□□□□ 0.78
UBE2N-201ENST00000318066 TET3O43151 1660 aa19.94■□□□□ 0.78
UBE2N-201ENST00000318066 TRAPPC3O43617 180 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 VHLP40337 213 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 RUNX1T1Q06455 604 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 PTK7Q13308 1070 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 KPNB1Q14974 876 aaKnown RBP19.93■□□□□ 0.78
UBE2N-201ENST00000318066 CYTH1Q15438 398 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 CDR2LQ86X02 465 aaPredicted RBP19.93■□□□□ 0.78
UBE2N-201ENST00000318066 CDYLQ9Y232 598 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 POLBP06746 335 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 VEPH1Q14D04 833 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 LDHDQ86WU2 507 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 NR1H4Q96RI1 486 aaPredicted RBP19.93■□□□□ 0.78
UBE2N-201ENST00000318066 TRIM51Q9BSJ1 452 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 UNC45AQ9H3U1 944 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 RIC8BQ9NVN3 520 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 APRTP07741 180 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 NME3Q13232 169 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 ITIH4Q14624 930 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 FASTKD5Q7L8L6 764 aaKnown RBP19.93■□□□□ 0.78
UBE2N-201ENST00000318066 TAS2R42Q7RTR8 314 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 CATSPER3Q86XQ3 398 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 ANKMY2Q8IV38 441 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 SH2D3CQ8N5H7 860 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 GANCQ8TET4 914 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 DDI1Q8WTU0 396 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 ANKRD27Q96NW4 1050 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 ZIM3Q96PE6 472 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 CPVLQ9H3G5 476 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 TDRD3Q9H7E2 651 aaKnown RBP19.93■□□□□ 0.78
UBE2N-201ENST00000318066 TMEM8AQ9HCN3 771 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 ATP11BQ9Y2G3 1177 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 TRIM66O15016 1216 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 RAD51CO43502 376 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 ATP9BO43861 1147 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 ADORA2BP29275 332 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 NMT1P30419 496 aaKnown RBP19.93■□□□□ 0.78
UBE2N-201ENST00000318066 SESN2P58004 480 aaPredicted RBP19.93■□□□□ 0.78
UBE2N-201ENST00000318066 MRPL28Q13084 256 aaKnown RBP19.93■□□□□ 0.78
UBE2N-201ENST00000318066 RIT2Q99578 217 aa19.93■□□□□ 0.78
UBE2N-201ENST00000318066 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.93■□□□□ 0.78
UBE2N-201ENST00000318066 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.93■□□□□ 0.78
UBE2N-201ENST00000318066 ZNF185O15231 689 aa19.92■□□□□ 0.78
UBE2N-201ENST00000318066 FXR2P51116 673 aaKnown RBP eCLIP19.92■□□□□ 0.78
UBE2N-201ENST00000318066 PLD3Q8IV08 490 aa19.92■□□□□ 0.78
UBE2N-201ENST00000318066 FAM84BQ96KN1 310 aaPredicted RBP19.92■□□□□ 0.78
UBE2N-201ENST00000318066 C10orf88Q9H8K7 445 aa19.92■□□□□ 0.78
UBE2N-201ENST00000318066 ZNF556Q9HAH1 456 aa19.92■□□□□ 0.78
UBE2N-201ENST00000318066 MAP3K20Q9NYL2 800 aaKnown RBP19.92■□□□□ 0.78
UBE2N-201ENST00000318066 PHF20L1A8MW92 1017 aa19.92■□□□□ 0.78
UBE2N-201ENST00000318066 RANBP1P43487 201 aa19.92■□□□□ 0.78
UBE2N-201ENST00000318066 SP8Q8IXZ3 490 aa19.92■□□□□ 0.78
UBE2N-201ENST00000318066 RMDN1Q96DB5 314 aa19.92■□□□□ 0.78
UBE2N-201ENST00000318066 ARHGEF38Q9NXL2 777 aa19.92■□□□□ 0.78
UBE2N-201ENST00000318066 SCN3BQ9NY72 215 aa19.92■□□□□ 0.78
UBE2N-201ENST00000318066 MTMR4Q9NYA4 1195 aa19.92■□□□□ 0.78
UBE2N-201ENST00000318066 SPATA31A3Q5VYP0 1347 aa19.92■□□□□ 0.78
UBE2N-201ENST00000318066 USP31Q70CQ4 1352 aa19.92■□□□□ 0.78
UBE2N-201ENST00000318066 NEMP1O14524 444 aa19.92■□□□□ 0.78
UBE2N-201ENST00000318066 STIP1P31948 543 aaKnown RBP19.92■□□□□ 0.78
UBE2N-201ENST00000318066 STAT5BP51692 787 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms