RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 ALDH2P05091 517 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 GSTT2P0CG29 244 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 GSTT2BP0CG30 244 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 CRABP2P29373 138 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 SHMT1P34896 483 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 GEMIN4P57678 1058 aaKnown RBP16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 TBL3Q12788 808 aaKnown RBP16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 DCTN2Q13561 401 aaKnown RBP16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 DHX34Q14147 1143 aaKnown RBP16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 KYNUQ16719 465 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 TTBK2Q6IQ55 1244 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 CNNM4Q6P4Q7 775 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 B3GNT6Q6ZMB0 384 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 ACAD11Q709F0 780 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 FNDC8Q8TC99 324 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 DGCR14Q96DF8 476 aaKnown RBP16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 C7orf25Q9BPX7 421 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 TAS2R1Q9NYW7 299 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 SERPINB13Q9UIV8 391 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 RASAL2Q9UJF2 1139 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 TCRBV7S2A1N4TA0A589 114 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 EDF1O60869 148 aaKnown RBP16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 IDO1P14902 403 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 NOVP48745 357 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 SH3BGRP55822 239 aaPredicted RBP16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 IL9RQ01113 521 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 CABP7Q86V35 215 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 VPS52Q8N1B4 723 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 METTL25Q8N6Q8 603 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 FBXO27Q8NI29 283 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 PRPF31Q8WWY3 499 aaKnown RBP16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 KIAA1522Q9P206 1035 aaPredicted RBP16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 SMIM31A0A1B0GVY4 71 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 SLC16A2P36021 539 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 CPA2P48052 419 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 MARCKSL1P49006 195 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 HDAC4P56524 1084 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 DLG1Q12959 904 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 ITGA7Q13683 1181 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 LLGL1Q15334 1064 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 SLC2A7Q6PXP3 512 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 PAOXQ6QHF9 649 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 C14orf80Q86SX3 495 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 SLC25A41Q8N5S1 370 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 CFAP61Q8NHU2 1237 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 SHKBP1Q8TBC3 707 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 RSPH1Q8WYR4 309 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 CLPTM1LQ96KA5 538 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 CCSER1Q9C0I3 900 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 DNAJC18Q9H819 358 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 FBXO6Q9NRD1 293 aaPredicted RBP16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 DOLKQ9UPQ8 538 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 NAALADL1Q9UQQ1 740 aa16.64■□□□□ 0.25
CTDSP1-201ENST00000273062 SPTLC1O15269 473 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 PDE5AO76074 875 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 SMIM18P0DKX4 95 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 CRKP46108 304 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 NT5C2P49902 561 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 LMNB2Q03252 620 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 OVGP1Q12889 678 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 SFT2D3Q587I9 215 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 EPM2AIP1Q7L775 607 aaPredicted RBP16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 OTOAQ7RTW8 1153 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 ART4Q93070 314 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 TEKT1Q969V4 418 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 CLIP3Q96DZ5 547 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 PRICKLE1Q96MT3 831 aaPredicted RBP16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 MKNK1Q9BUB5 465 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 EMILIN3Q9NT22 766 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 FAIMQ9NVQ4 179 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 IGKV6D-41A0A0C4DH26 115 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 P4HA2O15460 535 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 SERPINB7O75635 380 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 RFWD2Q8NHY2 731 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 C7orf43Q8WVR3 580 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 IRGQQ8WZA9 623 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 ADAM33Q9BZ11 813 aa16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 AJAP1Q9UKB5 411 aaPredicted RBP16.63■□□□□ 0.25
CTDSP1-201ENST00000273062 MYMKA6NI61 221 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 BUD23O43709 281 aaKnown RBP16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 VCAM1P19320 739 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 PSMD7P51665 324 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 CLCN2P51788 898 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 MSLNQ13421 630 aaPredicted RBP16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 GRM2Q14416 872 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 KCTD21Q4G0X4 260 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 SMUG1Q53HV7 270 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 SLC45A4Q5BKX6 768 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 KCTD1Q719H9 257 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 TBCKQ8TEA7 893 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 FAM161BQ96MY7 647 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 ABCB11O95342 1321 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 ADGRA3Q8IWK6 1321 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 UTRNP46939 3433 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 MAGEB2O15479 319 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 PPP1R11O60927 126 aaPredicted RBP16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 PHF2O75151 1096 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 FGFR1OPO95684 399 aaKnown RBP16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 SLC9A1P19634 815 aa16.62■□□□□ 0.25
CTDSP1-201ENST00000273062 ABCB4P21439 1286 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms