RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 PAXIP1Q6ZW49 1069 aaPredicted RBP17.84■□□□□ 0.45
SQLE-201ENST00000265896 TRMT10CQ7L0Y3 403 aaKnown RBP17.84■□□□□ 0.45
SQLE-201ENST00000265896 ZBED8Q8IZ13 594 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 CLEC4DQ8WXI8 215 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 RIT2Q99578 217 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 STMN4Q9H169 189 aaPredicted RBP17.84■□□□□ 0.45
SQLE-201ENST00000265896 MYLK2Q9H1R3 596 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 EHMT1Q9H9B1 1298 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 TMEM8AQ9HCN3 771 aa17.84■□□□□ 0.45
SQLE-201ENST00000265896 NKX1-2Q9UD57 310 aaPredicted RBP17.84■□□□□ 0.45
SQLE-201ENST00000265896 F8VP50 259 aa17.83■□□□□ 0.45
SQLE-201ENST00000265896 RPA3P35244 121 aaPredicted RBP17.83■□□□□ 0.45
SQLE-201ENST00000265896 PIK3CAP42336 1068 aa17.83■□□□□ 0.45
SQLE-201ENST00000265896 MAGEA4P43358 317 aa17.83■□□□□ 0.45
SQLE-201ENST00000265896 CYP4A22Q5TCH4 519 aa17.83■□□□□ 0.45
SQLE-201ENST00000265896 SCARA5Q6ZMJ2 495 aa17.83■□□□□ 0.45
SQLE-201ENST00000265896 RFX8Q6ZV50 586 aa17.83■□□□□ 0.45
SQLE-201ENST00000265896 CDR2LQ86X02 465 aaPredicted RBP17.83■□□□□ 0.45
SQLE-201ENST00000265896 NLGN1Q8N2Q7 840 aa17.83■□□□□ 0.45
SQLE-201ENST00000265896 CKAP2Q8WWK9 683 aa17.83■□□□□ 0.45
SQLE-201ENST00000265896 KLHL14Q9P2G3 628 aa17.83■□□□□ 0.45
SQLE-201ENST00000265896 C2orf71A6NGG8 1288 aa17.83■□□□□ 0.44
SQLE-201ENST00000265896 SPDYE2BA6NHP3 402 aa17.83■□□□□ 0.44
SQLE-201ENST00000265896 SPDYE6P0CI01 402 aa17.83■□□□□ 0.44
SQLE-201ENST00000265896 ITIH2P19823 946 aa17.83■□□□□ 0.44
SQLE-201ENST00000265896 TAC1P20366 129 aa17.83■□□□□ 0.44
SQLE-201ENST00000265896 CYP24A1Q07973 514 aa17.83■□□□□ 0.44
SQLE-201ENST00000265896 FNBP1Q96RU3 617 aa17.83■□□□□ 0.44
SQLE-201ENST00000265896 UVRAGQ9P2Y5 699 aa17.83■□□□□ 0.44
SQLE-201ENST00000265896 FOCADQ5VW36 1801 aa17.83■□□□□ 0.44
SQLE-201ENST00000265896 FGFR1P11362 822 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 PECAM1P16284 738 aaPredicted RBP17.82■□□□□ 0.44
SQLE-201ENST00000265896 MSH2P43246 934 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 ARSEP51690 589 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 HADHBP55084 474 aaKnown RBP17.82■□□□□ 0.44
SQLE-201ENST00000265896 ARHGEF16Q5VV41 709 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 ATL2Q8NHH9 583 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 ZNF570Q96NI8 536 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 ARL2BPQ9Y2Y0 163 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 CTDP1Q9Y5B0 961 aaPredicted RBP17.82■□□□□ 0.44
SQLE-201ENST00000265896 MYPNQ86TC9 1320 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 KAT6AQ92794 2004 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 EGFRP00533 1210 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 SLC8A1P32418 973 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 SMAD1Q15797 465 aaKnown RBP17.82■□□□□ 0.44
SQLE-201ENST00000265896 TNFAIP8L3Q5GJ75 292 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 MFSD7Q6UXD7 560 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 SERPINB12Q96P63 405 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 TRAIPQ9BWF2 469 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 APOBEC3GQ9HC16 384 aaKnown RBP17.82■□□□□ 0.44
SQLE-201ENST00000265896 A1CFQ9NQ94 594 aaKnown RBP17.82■□□□□ 0.44
SQLE-201ENST00000265896 UBE4BO95155 1302 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 SPATA31A6Q5VVP1 1343 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 PIK3R2O00459 728 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 MAP3K6O95382 1288 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 HLA-DRAP01903 254 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 CA4P22748 312 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 BAATQ14032 418 aaPredicted RBP17.82■□□□□ 0.44
SQLE-201ENST00000265896 TDRD10Q5VZ19 366 aaKnown RBP17.82■□□□□ 0.44
SQLE-201ENST00000265896 MFSD5Q6N075 450 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 MIEF2Q96C03 454 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 PDGFDQ9GZP0 370 aaPredicted RBP17.82■□□□□ 0.44
SQLE-201ENST00000265896 QTRT2Q9H974 415 aaKnown RBP17.82■□□□□ 0.44
SQLE-201ENST00000265896 WHRNQ9P202 907 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 IVNS1ABPQ9Y6Y0 642 aa17.82■□□□□ 0.44
SQLE-201ENST00000265896 UNGP13051 313 aaPredicted RBP17.81■□□□□ 0.44
SQLE-201ENST00000265896 SSTR1P30872 391 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 HIRAP54198 1017 aaPredicted RBP17.81■□□□□ 0.44
SQLE-201ENST00000265896 OSTNP61366 133 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 BNIP1Q12981 228 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 SLC1A5Q15758 541 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 BRDTQ58F21 947 aaPredicted RBP17.81■□□□□ 0.44
SQLE-201ENST00000265896 DPH6Q7L8W6 267 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 OR5B17Q8NGF7 314 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 MICAL1Q8TDZ2 1067 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 KCND2Q9NZV8 630 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 TJP2Q9UDY2 1190 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 NEU2Q9Y3R4 380 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 LRRIQ4A6NIV6 560 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 TTLL13PA6NNM8 815 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 ENTPD3O75355 529 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 GGPS1O95749 300 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 APBA3O96018 575 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 OAS1P00973 400 aaKnown RBP17.81■□□□□ 0.44
SQLE-201ENST00000265896 RFX1P22670 979 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 PGM5Q15124 567 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 ZBTB33Q86T24 672 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 OGFOD1Q8N543 542 aa17.81■□□□□ 0.44
SQLE-201ENST00000265896 UTP4Q969X6 686 aaKnown RBP17.81■□□□□ 0.44
SQLE-201ENST00000265896 GNA15P30679 374 aa17.8■□□□□ 0.44
SQLE-201ENST00000265896 LIG4P49917 911 aa17.8■□□□□ 0.44
SQLE-201ENST00000265896 MCEEQ96PE7 176 aa17.8■□□□□ 0.44
SQLE-201ENST00000265896 PLVAPQ9BX97 442 aa17.8■□□□□ 0.44
SQLE-201ENST00000265896 ZWILCHQ9H900 591 aa17.8■□□□□ 0.44
SQLE-201ENST00000265896 NPHS2Q9NP85 383 aa17.8■□□□□ 0.44
SQLE-201ENST00000265896 SGK1O00141 431 aa17.8■□□□□ 0.44
SQLE-201ENST00000265896 KRT1P04264 644 aa17.8■□□□□ 0.44
SQLE-201ENST00000265896 GPC3P51654 580 aa17.8■□□□□ 0.44
SQLE-201ENST00000265896 PSMC5P62195 406 aa17.8■□□□□ 0.44
SQLE-201ENST00000265896 MAMLD1Q13495 774 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms