RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 MED21Q13503 144 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 C12orf60Q5U649 245 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 ZNF746Q6NUN9 644 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-201ENST00000261443 ACAD11Q709F0 780 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 RASSF3Q86WH2 238 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 FAM186BQ8IYM0 893 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 CCDC110Q8TBZ0 833 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 PRR11Q96HE9 360 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-201ENST00000261443 RBM15Q96T37 977 aaKnown RBP eCLIP7.65□□□□□ -1.183e-7■■■■□ 23.4
CSDE1-201ENST00000261443 ADAM33Q9BZ11 813 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 INTS2Q9H0H0 1204 aaKnown RBP7.65□□□□□ -1.18
CSDE1-201ENST00000261443 SENP1Q9P0U3 644 aa7.65□□□□□ -1.18
CSDE1-201ENST00000261443 COL14A1Q05707 1796 aaKnown RBP7.65□□□□□ -1.19
CSDE1-201ENST00000261443 FOXN3O00409 490 aaPredicted RBP7.65□□□□□ -1.19
CSDE1-201ENST00000261443 ATP9BO43861 1147 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 ZBED4O75132 1171 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 USP1O94782 785 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 GCNT3O95395 438 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 RARBP10826 455 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 RRM1P23921 792 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 GCAP28676 217 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 RGS2P41220 211 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 GRIA2P42262 883 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 CPA2P48052 419 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 RAP1GDS1P52306 607 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 SLC12A3P55017 1021 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 CBX3Q13185 183 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 PABPC4Q13310 644 aaKnown RBP eCLIP7.65□□□□□ -1.192e-14■■□□□ 12.5
CSDE1-201ENST00000261443 MPP3Q13368 585 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 KIF22Q14807 665 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 IZUMO3Q5VZ72 239 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 PTTG2Q9NZH5 202 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 NDUFA13Q9P0J0 144 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 APEX2Q9UBZ4 518 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 ZBTB1Q9Y2K1 713 aa7.65□□□□□ -1.19
CSDE1-201ENST00000261443 C10orf71Q711Q0 1435 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 A0A1W2PPM1 405 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 B2RBV5 119 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 ABHD2P08910 425 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 PLS3P13797 630 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 PSMC2P35998 433 aaKnown RBP7.64□□□□□ -1.19
CSDE1-201ENST00000261443 ADARP55265 1226 aaKnown RBP7.64□□□□□ -1.19
CSDE1-201ENST00000261443 UBE2SQ16763 222 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 SUSD4Q5VX71 490 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 POTEGQ6S5H5 508 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 RIPOR1Q6ZS17 1223 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 NET1Q7Z628 596 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-201ENST00000261443 LRRC6Q86X45 466 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 MAP7D3Q8IWC1 876 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 SCUBE1Q8IWY4 988 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 SLC44A5Q8NCS7 719 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 BBOF1Q8ND07 529 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 ZNF564Q8TBZ8 553 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-201ENST00000261443 SNRNP27Q8WVK2 155 aaKnown RBP7.64□□□□□ -1.19
CSDE1-201ENST00000261443 SPIRE2Q8WWL2 714 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 ZNF653Q96CK0 615 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 DGCR14Q96DF8 476 aaKnown RBP7.64□□□□□ -1.19
CSDE1-201ENST00000261443 REEP2Q9BRK0 252 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 KIAA1551Q9HCM1 1747 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 CCDC160A6NGH7 325 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 TYROBPO43914 113 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 MAGEC1O60732 1142 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 ZNF189O75820 626 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-201ENST00000261443 OATP04181 439 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 KRT4P19013 534 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 RFC4P35249 363 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 CDK16Q00536 496 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 KCNA1Q09470 495 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 ITGA9Q13797 1035 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 KRT72Q14CN4 511 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 TCEAL1Q15170 157 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 LRRC36Q1X8D7 754 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 TRMT5Q32P41 509 aaKnown RBP7.64□□□□□ -1.19
CSDE1-201ENST00000261443 CBWD6Q4V339 395 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 CBWD3Q5JTY5 395 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 CBWD5Q5RIA9 395 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 CAPN12Q6ZSI9 719 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 RAPH1Q70E73 1250 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 ZNF554Q86TJ5 538 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 RELL1Q8IUW5 271 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 ZNF34Q8IZ26 560 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 ZBTB8BQ8NAP8 495 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-201ENST00000261443 OR6Y1Q8NGX8 325 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 SKA1Q96BD8 255 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 NUP85Q9BW27 656 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 TMEM120AQ9BXJ8 343 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 SAYSD1Q9NPB0 183 aa7.64□□□□□ -1.19
CSDE1-201ENST00000261443 MTO1Q9Y2Z2 717 aaKnown RBP7.64□□□□□ -1.19
CSDE1-201ENST00000261443 H3BRJ5 948 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 PLSCR1O15162 318 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 ZNF862O60290 1169 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 DNAJC6O75061 913 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 MED24O75448 989 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 ADRA1DP25100 572 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 PRDX5P30044 214 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 ASPHQ12797 758 aa7.63□□□□□ -1.19
CSDE1-201ENST00000261443 CYLC2Q14093 348 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-201ENST00000261443 HNRNPDQ14103 355 aaKnown RBP7.63□□□□□ -1.19
CSDE1-201ENST00000261443 HP1BP3Q5SSJ5 553 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-201ENST00000261443 C1orf146Q5VVC0 180 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms