RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 IRX3P78415 501 aaPredicted RBP23.36■■□□□ 1.33
RNF39-201ENST00000244360 OR5B17Q8NGF7 314 aa23.36■■□□□ 1.33
RNF39-201ENST00000244360 SLCO2A1Q92959 643 aa23.36■■□□□ 1.33
RNF39-201ENST00000244360 PLVAPQ9BX97 442 aa23.36■■□□□ 1.33
RNF39-201ENST00000244360 LRRC19Q9H756 370 aa23.36■■□□□ 1.33
RNF39-201ENST00000244360 C5orf60A6NFR6 353 aa23.36■■□□□ 1.33
RNF39-201ENST00000244360 ADM5C9JUS6 153 aa23.36■■□□□ 1.33
RNF39-201ENST00000244360 H0YHG0 523 aa23.36■■□□□ 1.33
RNF39-201ENST00000244360 SOCS7O14512 581 aa23.36■■□□□ 1.33
RNF39-201ENST00000244360 RPL21P46778 160 aaKnown RBP23.36■■□□□ 1.33
RNF39-201ENST00000244360 AP3M2P53677 418 aa23.36■■□□□ 1.33
RNF39-201ENST00000244360 MAGOHP61326 146 aaKnown RBP23.36■■□□□ 1.33
RNF39-201ENST00000244360 NOP14P78316 857 aaKnown RBP23.36■■□□□ 1.33
RNF39-201ENST00000244360 ABRAQ8N0Z2 381 aa23.36■■□□□ 1.33
RNF39-201ENST00000244360 PRPF31Q8WWY3 499 aaKnown RBP23.36■■□□□ 1.33
RNF39-201ENST00000244360 CENPTQ96BT3 561 aa23.36■■□□□ 1.33
RNF39-201ENST00000244360 FGD4Q96M96 766 aa23.36■■□□□ 1.33
RNF39-201ENST00000244360 EPB41L4BQ9H329 900 aa23.36■■□□□ 1.33
RNF39-201ENST00000244360 ATP8A1Q9Y2Q0 1164 aa23.36■■□□□ 1.33
RNF39-201ENST00000244360 NUB1Q9Y5A7 615 aa23.36■■□□□ 1.33
RNF39-201ENST00000244360 MSCO60682 206 aa23.35■■□□□ 1.33
RNF39-201ENST00000244360 LGR5O75473 907 aa23.35■■□□□ 1.33
RNF39-201ENST00000244360 NOMO3P69849 1222 aa23.35■■□□□ 1.33
RNF39-201ENST00000244360 IER5Q5VY09 327 aa23.35■■□□□ 1.33
RNF39-201ENST00000244360 UBR7Q8N806 425 aa23.35■■□□□ 1.33
RNF39-201ENST00000244360 FBXO25Q8TCJ0 367 aa23.35■■□□□ 1.33
RNF39-201ENST00000244360 VCPIP1Q96JH7 1222 aa23.35■■□□□ 1.33
RNF39-201ENST00000244360 TRIM7Q9C029 511 aa23.35■■□□□ 1.33
RNF39-201ENST00000244360 ASCC2Q9H1I8 757 aaPredicted RBP23.35■■□□□ 1.33
RNF39-201ENST00000244360 PABPC3Q9H361 631 aaKnown RBP23.35■■□□□ 1.33
RNF39-201ENST00000244360 ACTR5Q9H9F9 607 aaPredicted RBP23.35■■□□□ 1.33
RNF39-201ENST00000244360 PCDHB4Q9Y5E5 795 aa23.35■■□□□ 1.33
RNF39-201ENST00000244360 GAS2O43903 313 aaKnown RBP23.35■■□□□ 1.33
RNF39-201ENST00000244360 SLC25A27O95847 323 aa23.35■■□□□ 1.33
RNF39-201ENST00000244360 PMS2P54278 862 aa23.35■■□□□ 1.33
RNF39-201ENST00000244360 PLTPP55058 493 aa23.35■■□□□ 1.33
RNF39-201ENST00000244360 PTP4A2Q12974 167 aa23.35■■□□□ 1.33
RNF39-201ENST00000244360 NCOA4Q13772 614 aa23.35■■□□□ 1.33
RNF39-201ENST00000244360 PHF13Q86YI8 300 aaPredicted RBP23.35■■□□□ 1.33
RNF39-201ENST00000244360 FAM129AQ9BZQ8 928 aa23.35■■□□□ 1.33
RNF39-201ENST00000244360 UMODL1Q5DID0 1318 aa23.34■■□□□ 1.33
RNF39-201ENST00000244360 TTLL13PA6NNM8 815 aa23.34■■□□□ 1.33
RNF39-201ENST00000244360 CXCL11O14625 94 aa23.34■■□□□ 1.33
RNF39-201ENST00000244360 CLDN3O15551 220 aa23.34■■□□□ 1.33
RNF39-201ENST00000244360 TOM1L1O75674 476 aa23.34■■□□□ 1.33
RNF39-201ENST00000244360 IREB2P48200 963 aaKnown RBP23.34■■□□□ 1.33
RNF39-201ENST00000244360 ZNF132P52740 706 aa23.34■■□□□ 1.33
RNF39-201ENST00000244360 BYSLQ13895 437 aaKnown RBP23.34■■□□□ 1.33
RNF39-201ENST00000244360 LY6KQ17RY6 165 aa23.34■■□□□ 1.33
RNF39-201ENST00000244360 RNF187Q5TA31 235 aaPredicted RBP23.34■■□□□ 1.33
RNF39-201ENST00000244360 PPP1R2P3Q6NXS1 205 aa23.34■■□□□ 1.33
RNF39-201ENST00000244360 TMEM270Q6UE05 265 aa23.34■■□□□ 1.33
RNF39-201ENST00000244360 SULF1Q8IWU6 871 aa23.34■■□□□ 1.33
RNF39-201ENST00000244360 RBBP8NLQ8NC74 664 aaPredicted RBP23.34■■□□□ 1.33
RNF39-201ENST00000244360 DCPSQ96C86 337 aaKnown RBP23.34■■□□□ 1.33
RNF39-201ENST00000244360 GPR20Q99678 358 aa23.34■■□□□ 1.33
RNF39-201ENST00000244360 MRPL4Q9BYD3 311 aaKnown RBP23.34■■□□□ 1.33
RNF39-201ENST00000244360 AZI2Q9H6S1 392 aa23.34■■□□□ 1.33
RNF39-201ENST00000244360 IGKV6-21A0A0C4DH24 114 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 DDNO94850 711 aaPredicted RBP23.33■■□□□ 1.33
RNF39-201ENST00000244360 PROSCO94903 275 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 ARIH2O95376 493 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 GNA15P30679 374 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 HNRNPH1P31943 449 aaKnown RBP23.33■■□□□ 1.33
RNF39-201ENST00000244360 ACTN3Q08043 901 aaPredicted RBP23.33■■□□□ 1.33
RNF39-201ENST00000244360 MKRN4PQ13434 485 aaPredicted RBP23.33■■□□□ 1.33
RNF39-201ENST00000244360 KCNV1Q6PIU1 500 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 WDR49Q8IV35 697 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 P3H4Q92791 437 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 R3HDMLQ9H3Y0 253 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 SBF1O95248 1867 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 ZBTB42B2RXF5 422 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 CFHP08603 1231 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 GTF2A1P52655 376 aaPredicted RBP23.33■■□□□ 1.33
RNF39-201ENST00000244360 LIN9Q5TKA1 542 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 DENND2CQ68D51 928 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 CCDC121Q6ZUS5 278 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 ERO1BQ86YB8 467 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 TCP11Q8WWU5 503 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 PGM2Q96G03 612 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 DDX27Q96GQ7 796 aaKnown RBP23.33■■□□□ 1.33
RNF39-201ENST00000244360 CABS1Q96KC9 395 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 MPHOSPH6Q99547 160 aaKnown RBP23.33■■□□□ 1.33
RNF39-201ENST00000244360 ELP3Q9H9T3 547 aa23.33■■□□□ 1.33
RNF39-201ENST00000244360 MTRF1LQ9UGC7 380 aaKnown RBP23.33■■□□□ 1.33
RNF39-201ENST00000244360 ABLIM1O14639 778 aa23.32■■□□□ 1.32
RNF39-201ENST00000244360 ASS1P00966 412 aaKnown RBP23.32■■□□□ 1.32
RNF39-201ENST00000244360 IFT88Q13099 833 aa23.32■■□□□ 1.32
RNF39-201ENST00000244360 FBXW10Q5XX13 1052 aa23.32■■□□□ 1.32
RNF39-201ENST00000244360 CCDC105Q8IYK2 499 aa23.32■■□□□ 1.32
RNF39-201ENST00000244360 RAPGEF5Q92565 580 aa23.32■■□□□ 1.32
RNF39-201ENST00000244360 OTUD5Q96G74 571 aa23.32■■□□□ 1.32
RNF39-201ENST00000244360 DDX20Q9UHI6 824 aaKnown RBP23.32■■□□□ 1.32
RNF39-201ENST00000244360 KCNH4Q9UQ05 1017 aa23.32■■□□□ 1.32
RNF39-201ENST00000244360 PASKQ96RG2 1323 aa23.32■■□□□ 1.32
RNF39-201ENST00000244360 TMOD1P28289 359 aa23.32■■□□□ 1.32
RNF39-201ENST00000244360 C1QBPQ07021 282 aaKnown RBP23.32■■□□□ 1.32
RNF39-201ENST00000244360 MXD4Q14582 209 aaPredicted RBP23.32■■□□□ 1.32
RNF39-201ENST00000244360 SEZ6Q53EL9 994 aa23.32■■□□□ 1.32
RNF39-201ENST00000244360 CELF3Q5SZQ8 465 aaKnown RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms