RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 GUF1Q8N442 669 aaKnown RBP8.65□□□□□ -1.02
CXCR4-201ENST00000241393 ACRBPQ8NEB7 543 aa8.65□□□□□ -1.02
CXCR4-201ENST00000241393 LRRC15Q8TF66 581 aa8.65□□□□□ -1.02
CXCR4-201ENST00000241393 DCAF4Q8WV16 495 aa8.65□□□□□ -1.02
CXCR4-201ENST00000241393 PARD6BQ9BYG5 372 aa8.65□□□□□ -1.02
CXCR4-201ENST00000241393 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.65□□□□□ -1.02
CXCR4-201ENST00000241393 PCDHA11Q9Y5I1 949 aa8.65□□□□□ -1.02
CXCR4-201ENST00000241393 CTAGE15A4D2H0 777 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 EIF3CLB5ME19 914 aaKnown RBP8.65□□□□□ -1.03
CXCR4-201ENST00000241393 TBX1O43435 398 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 ERLIN1O75477 346 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 IPO7O95373 1038 aaKnown RBP8.65□□□□□ -1.03
CXCR4-201ENST00000241393 TTLL1O95922 423 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 CTAGE8P0CG41 777 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 PAMP19021 973 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 HNRNPH3P31942 346 aaKnown RBP8.65□□□□□ -1.03
CXCR4-201ENST00000241393 L1CAMP32004 1257 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 TECP42680 631 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 LRRC63Q05C16 580 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 ZNF543Q08ER8 600 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 STK4Q13043 487 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 MSMPQ1L6U9 139 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 FKBP15Q5T1M5 1219 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 RSPO2Q6UXX9 243 aaPredicted RBP8.65□□□□□ -1.03
CXCR4-201ENST00000241393 CTAGE6Q86UF2 777 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 CTAGE4Q8IX94 777 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 PTPRN2Q92932 1015 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 MTMR8Q96EF0 704 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 RPGRIP1Q96KN7 1286 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 EXOC2Q96KP1 924 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 CNOT6LQ96LI5 555 aaKnown RBP8.65□□□□□ -1.03
CXCR4-201ENST00000241393 CCDC17Q96LX7 622 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 FCRL3Q96P31 734 aaPredicted RBP8.65□□□□□ -1.03
CXCR4-201ENST00000241393 GPR101Q96P66 508 aaPredicted RBP8.65□□□□□ -1.03
CXCR4-201ENST00000241393 EIF3CQ99613 913 aaKnown RBP8.65□□□□□ -1.03
CXCR4-201ENST00000241393 ZFYVE21Q9BQ24 234 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 SLF1Q9BQI6 1058 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 EDEM3Q9BZQ6 932 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 KANSL2Q9H9L4 492 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 RIC8AQ9NPQ8 531 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 LRWD1Q9UFC0 647 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 SFMBT1Q9UHJ3 866 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 SERPINB13Q9UIV8 391 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 REXO2Q9Y3B8 237 aaKnown RBP8.65□□□□□ -1.03
CXCR4-201ENST00000241393 ATP6V0A2Q9Y487 856 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 U3KQE9 123 aa8.65□□□□□ -1.03
CXCR4-201ENST00000241393 MYH8P13535 1937 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 ANO9A1A5B4 782 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 B4DLN1 442 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 POLRMTO00411 1230 aaKnown RBP8.64□□□□□ -1.03
CXCR4-201ENST00000241393 AQP7O14520 342 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 KRT86O43790 486 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 DLX3O60479 287 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 CAPNS1P04632 268 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 MTIF2P46199 727 aaKnown RBP8.64□□□□□ -1.03
CXCR4-201ENST00000241393 MRPL12P52815 198 aaKnown RBP8.64□□□□□ -1.03
CXCR4-201ENST00000241393 TMEM119Q4V9L6 283 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 HYIQ5T013 277 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 KRT79Q5XKE5 535 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 ANKRD40Q6AI12 368 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 MCTP2Q6DN12 878 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 WDR59Q6PJI9 974 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 HHIPL2Q6UWX4 724 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 LARP4BQ92615 738 aaKnown RBP8.64□□□□□ -1.03
CXCR4-201ENST00000241393 COPS5Q92905 334 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 CDK5RAP3Q96JB5 506 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 CHP1Q99653 195 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 MRIQ9BWK5 157 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 LGR4Q9BXB1 951 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 TSGA10Q9BZW7 698 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 BLOC1S4Q9NUP1 217 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 MYO6Q9UM54 1294 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 KDM3AQ9Y4C1 1321 aa8.64□□□□□ -1.03
CXCR4-201ENST00000241393 MAP2K7O14733 419 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 FKTNO75072 461 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 PRNPP04156 253 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 HLA-DOAP06340 250 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 AKR1B1P15121 316 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 TRIM21P19474 475 aaKnown RBP8.63□□□□□ -1.03
CXCR4-201ENST00000241393 IBSPP21815 317 aaPredicted RBP8.63□□□□□ -1.03
CXCR4-201ENST00000241393 MCM3P25205 808 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 RPL10P27635 214 aaKnown RBP8.63□□□□□ -1.03
CXCR4-201ENST00000241393 GRIA2P42262 883 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 TXKP42681 527 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 CKAP4Q07065 602 aaKnown RBP8.63□□□□□ -1.03
CXCR4-201ENST00000241393 DDR1Q08345 913 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 MAN2A1Q16706 1144 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 MIIPQ5JXC2 388 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 YOD1Q5VVQ6 348 aaPredicted RBP8.63□□□□□ -1.03
CXCR4-201ENST00000241393 TAF3Q5VWG9 929 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 PAPD7Q5XG87 772 aaKnown RBP8.63□□□□□ -1.03
CXCR4-201ENST00000241393 MOXD1Q6UVY6 613 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 TRAPPC11Q7Z392 1133 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 TEX2Q8IWB9 1127 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 PPIL6Q8IXY8 311 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 TMEM145Q8NBT3 493 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 KIAA0895Q8NCT3 520 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 RAD54LQ92698 747 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 CUL5Q93034 780 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 FCRL2Q96LA5 508 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms