RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 METTL14Q9HCE5 456 aaKnown RBP25.53■■□□□ 1.68
HOMER3-201ENST00000221222 ADAM28Q9UKQ2 775 aa25.53■■□□□ 1.68
HOMER3-201ENST00000221222 TULP1O00294 542 aaPredicted RBP25.52■■□□□ 1.68
HOMER3-201ENST00000221222 PIRO00625 290 aa25.52■■□□□ 1.68
HOMER3-201ENST00000221222 TNNC2P02585 160 aa25.52■■□□□ 1.68
HOMER3-201ENST00000221222 MARSP56192 900 aaKnown RBP25.52■■□□□ 1.68
HOMER3-201ENST00000221222 KRT17Q04695 432 aa25.52■■□□□ 1.68
HOMER3-201ENST00000221222 SKIV2LQ15477 1246 aaKnown RBP25.52■■□□□ 1.68
HOMER3-201ENST00000221222 C1orf220Q5T0J3 134 aa25.52■■□□□ 1.68
HOMER3-201ENST00000221222 C9orf57Q5W0N0 161 aa25.52■■□□□ 1.68
HOMER3-201ENST00000221222 CD300LGQ6UXG3 332 aa25.52■■□□□ 1.68
HOMER3-201ENST00000221222 TMEM130Q8N3G9 435 aa25.52■■□□□ 1.68
HOMER3-201ENST00000221222 C3orf58Q8NDZ4 430 aa25.52■■□□□ 1.68
HOMER3-201ENST00000221222 CXorf38Q8TB03 319 aa25.52■■□□□ 1.68
HOMER3-201ENST00000221222 SPPL3Q8TCT6 385 aa25.52■■□□□ 1.68
HOMER3-201ENST00000221222 ZNF516Q92618 1163 aa25.52■■□□□ 1.68
HOMER3-201ENST00000221222 STK39Q9UEW8 545 aa25.52■■□□□ 1.68
HOMER3-201ENST00000221222 ARMCX3Q9UH62 379 aaPredicted RBP25.52■■□□□ 1.68
HOMER3-201ENST00000221222 ITGA11Q9UKX5 1188 aa25.52■■□□□ 1.68
HOMER3-201ENST00000221222 B3GAT3O94766 335 aa25.51■■□□□ 1.67
HOMER3-201ENST00000221222 ANO6Q4KMQ2 910 aa25.51■■□□□ 1.67
HOMER3-201ENST00000221222 DDX53Q86TM3 631 aaKnown RBP25.51■■□□□ 1.67
HOMER3-201ENST00000221222 ATXN2LQ8WWM7 1075 aaKnown RBP25.51■■□□□ 1.67
HOMER3-201ENST00000221222 FAM84AQ96KN4 292 aa25.51■■□□□ 1.67
HOMER3-201ENST00000221222 ALG13Q9NP73 1137 aaKnown RBP25.51■■□□□ 1.67
HOMER3-201ENST00000221222 MTCH2Q9Y6C9 303 aa25.51■■□□□ 1.67
HOMER3-201ENST00000221222 SCN1AP35498 2009 aa25.51■■□□□ 1.67
HOMER3-201ENST00000221222 REV3LO60673 3130 aa25.5■■□□□ 1.67
HOMER3-201ENST00000221222 GRM6O15303 877 aa25.5■■□□□ 1.67
HOMER3-201ENST00000221222 LPXNO60711 386 aa25.5■■□□□ 1.67
HOMER3-201ENST00000221222 TADA2AO75478 443 aa25.5■■□□□ 1.67
HOMER3-201ENST00000221222 TPD52L1Q16890 204 aaPredicted RBP25.5■■□□□ 1.67
HOMER3-201ENST00000221222 CCDC40Q4G0X9 1142 aa25.5■■□□□ 1.67
HOMER3-201ENST00000221222 TRAPPC11Q7Z392 1133 aa25.5■■□□□ 1.67
HOMER3-201ENST00000221222 RNF168Q8IYW5 571 aaPredicted RBP25.5■■□□□ 1.67
HOMER3-201ENST00000221222 GDPD5Q8WTR4 605 aa25.5■■□□□ 1.67
HOMER3-201ENST00000221222 ASB2Q96Q27 587 aa25.5■■□□□ 1.67
HOMER3-201ENST00000221222 BPIFA3Q9BQP9 254 aa25.5■■□□□ 1.67
HOMER3-201ENST00000221222 VN1R3Q9BXE9 311 aa25.5■■□□□ 1.67
HOMER3-201ENST00000221222 NAT10Q9H0A0 1025 aaKnown RBP25.5■■□□□ 1.67
HOMER3-201ENST00000221222 LMAN2LQ9H0V9 348 aa25.5■■□□□ 1.67
HOMER3-201ENST00000221222 THAP9Q9H5L6 903 aa25.5■■□□□ 1.67
HOMER3-201ENST00000221222 PUF60Q9UHX1 559 aaKnown RBP25.5■■□□□ 1.67
HOMER3-201ENST00000221222 SIX4Q9UIU6 781 aa25.5■■□□□ 1.67
HOMER3-201ENST00000221222 PPEF2O14830 753 aa25.49■■□□□ 1.67
HOMER3-201ENST00000221222 ITGB3P05106 788 aa25.49■■□□□ 1.67
HOMER3-201ENST00000221222 IGFBP6P24592 240 aaPredicted RBP25.49■■□□□ 1.67
HOMER3-201ENST00000221222 MRPS5P82675 430 aaKnown RBP25.49■■□□□ 1.67
HOMER3-201ENST00000221222 IRF2BP1Q8IU81 584 aa25.49■■□□□ 1.67
HOMER3-201ENST00000221222 TCF20Q9UGU0 1960 aaKnown RBP25.49■■□□□ 1.67
HOMER3-201ENST00000221222 ATG2AQ2TAZ0 1938 aa25.49■■□□□ 1.67
HOMER3-201ENST00000221222 SF3B1O75533 1304 aaKnown RBP eCLIP25.48■■□□□ 1.67
HOMER3-201ENST00000221222 C4BPAP04003 597 aaKnown RBP25.48■■□□□ 1.67
HOMER3-201ENST00000221222 TRIM49P0CI25 452 aa25.48■■□□□ 1.67
HOMER3-201ENST00000221222 TRIM49CP0CI26 452 aa25.48■■□□□ 1.67
HOMER3-201ENST00000221222 PAX3P23760 479 aa25.48■■□□□ 1.67
HOMER3-201ENST00000221222 GTF2H1P32780 548 aa25.48■■□□□ 1.67
HOMER3-201ENST00000221222 FUT10Q6P4F1 479 aa25.48■■□□□ 1.67
HOMER3-201ENST00000221222 TRIM59Q8IWR1 403 aa25.48■■□□□ 1.67
HOMER3-201ENST00000221222 HASPINQ8TF76 798 aa25.48■■□□□ 1.67
HOMER3-201ENST00000221222 POF1BQ8WVV4 589 aa25.48■■□□□ 1.67
HOMER3-201ENST00000221222 NFE2L3Q9Y4A8 694 aa25.48■■□□□ 1.67
HOMER3-201ENST00000221222 STX10O60499 249 aa25.47■■□□□ 1.67
HOMER3-201ENST00000221222 DNAJB1P25685 340 aa25.47■■□□□ 1.67
HOMER3-201ENST00000221222 POLR2BP30876 1174 aaKnown RBP25.47■■□□□ 1.67
HOMER3-201ENST00000221222 AARSP49588 968 aaKnown RBP eCLIP25.47■■□□□ 1.67
HOMER3-201ENST00000221222 RBP5P82980 135 aa25.47■■□□□ 1.67
HOMER3-201ENST00000221222 MYL5Q02045 173 aa25.47■■□□□ 1.67
HOMER3-201ENST00000221222 TFF2Q03403 129 aa25.47■■□□□ 1.67
HOMER3-201ENST00000221222 ELAVL2Q12926 359 aaKnown RBP25.47■■□□□ 1.67
HOMER3-201ENST00000221222 CAMK1Q14012 370 aa25.47■■□□□ 1.67
HOMER3-201ENST00000221222 ZACNQ401N2 412 aa25.47■■□□□ 1.67
HOMER3-201ENST00000221222 TDRD10Q5VZ19 366 aaKnown RBP25.47■■□□□ 1.67
HOMER3-201ENST00000221222 C15orf39Q6ZRI6 1047 aa25.47■■□□□ 1.67
HOMER3-201ENST00000221222 LRRC52Q8N7C0 313 aa25.47■■□□□ 1.67
HOMER3-201ENST00000221222 SLC35C1Q96A29 364 aa25.47■■□□□ 1.67
HOMER3-201ENST00000221222 GPR62Q9BZJ7 368 aa25.47■■□□□ 1.67
HOMER3-201ENST00000221222 AGAP1Q9UPQ3 857 aa25.47■■□□□ 1.67
HOMER3-201ENST00000221222 NUB1Q9Y5A7 615 aa25.47■■□□□ 1.67
HOMER3-201ENST00000221222 VWA8A3KMH1 1905 aa25.46■■□□□ 1.67
HOMER3-201ENST00000221222 TRAPPC3O43617 180 aa25.46■■□□□ 1.67
HOMER3-201ENST00000221222 SOD2P04179 222 aa25.46■■□□□ 1.67
HOMER3-201ENST00000221222 PNPLA4P41247 253 aa25.46■■□□□ 1.67
HOMER3-201ENST00000221222 LILRA4P59901 499 aa25.46■■□□□ 1.67
HOMER3-201ENST00000221222 PPP3CAQ08209 521 aa25.46■■□□□ 1.67
HOMER3-201ENST00000221222 SCARA3Q6AZY7 606 aa25.46■■□□□ 1.67
HOMER3-201ENST00000221222 SV2AQ7L0J3 742 aa25.46■■□□□ 1.67
HOMER3-201ENST00000221222 FAM114A1Q8IWE2 563 aa25.46■■□□□ 1.67
HOMER3-201ENST00000221222 ADAMTS19Q8TE59 1207 aa25.46■■□□□ 1.67
HOMER3-201ENST00000221222 CNOT6LQ96LI5 555 aaKnown RBP25.46■■□□□ 1.67
HOMER3-201ENST00000221222 ZNF560Q96MR9 790 aa25.46■■□□□ 1.67
HOMER3-201ENST00000221222 HERC2P3Q9BVR0 1158 aa25.46■■□□□ 1.67
HOMER3-201ENST00000221222 TLR9Q9NR96 1032 aa25.46■■□□□ 1.67
HOMER3-201ENST00000221222 LMCD1Q9NZU5 365 aa25.46■■□□□ 1.67
HOMER3-201ENST00000221222 KRT19P08727 400 aa25.45■■□□□ 1.67
HOMER3-201ENST00000221222 POU3F3P20264 500 aaPredicted RBP25.45■■□□□ 1.67
HOMER3-201ENST00000221222 TAF6P49848 677 aa25.45■■□□□ 1.67
HOMER3-201ENST00000221222 DCAF17Q5H9S7 520 aaPredicted RBP25.45■■□□□ 1.67
HOMER3-201ENST00000221222 TCERG1LQ5VWI1 586 aa25.45■■□□□ 1.67
HOMER3-201ENST00000221222 VPS52Q8N1B4 723 aa25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms