RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 CTNNA2P26232 953 aa31.72■■■□□ 2.67
PABPN1-201ENST00000216727 TFAMQ00059 246 aaKnown RBP31.72■■■□□ 2.67
PABPN1-201ENST00000216727 TNFAIP2Q03169 654 aa31.72■■■□□ 2.67
PABPN1-201ENST00000216727 IRF5Q13568 498 aa31.72■■■□□ 2.67
PABPN1-201ENST00000216727 NAA35Q5VZE5 725 aa31.72■■■□□ 2.67
PABPN1-201ENST00000216727 CEP120Q8N960 986 aa31.72■■■□□ 2.67
PABPN1-201ENST00000216727 OR6J1Q8NGC5 347 aa31.72■■■□□ 2.67
PABPN1-201ENST00000216727 CPA5Q8WXQ8 436 aa31.72■■■□□ 2.67
PABPN1-201ENST00000216727 ANKRD36BP1Q96IX9 119 aa31.72■■■□□ 2.67
PABPN1-201ENST00000216727 VCPIP1Q96JH7 1222 aa31.72■■■□□ 2.67
PABPN1-201ENST00000216727 DDX47Q9H0S4 455 aaKnown RBP31.72■■■□□ 2.67
PABPN1-201ENST00000216727 RPF1Q9H9Y2 349 aaKnown RBP31.72■■■□□ 2.67
PABPN1-201ENST00000216727 ZHX1Q9UKY1 873 aaPredicted RBP31.72■■■□□ 2.67
PABPN1-201ENST00000216727 ZSCAN5CA6NGD5 496 aaPredicted RBP31.71■■■□□ 2.67
PABPN1-201ENST00000216727 ZEB2O60315 1214 aa31.71■■■□□ 2.67
PABPN1-201ENST00000216727 CLSTN1O94985 981 aa31.71■■■□□ 2.67
PABPN1-201ENST00000216727 CTNNA1P35221 906 aaKnown RBP31.71■■■□□ 2.67
PABPN1-201ENST00000216727 CARSP49589 748 aaKnown RBP31.71■■■□□ 2.67
PABPN1-201ENST00000216727 TERF2Q15554 542 aa31.71■■■□□ 2.67
PABPN1-201ENST00000216727 DGKDQ16760 1214 aa31.71■■■□□ 2.67
PABPN1-201ENST00000216727 CST9Q5W186 159 aa31.71■■■□□ 2.67
PABPN1-201ENST00000216727 MON1BQ7L1V2 547 aa31.71■■■□□ 2.67
PABPN1-201ENST00000216727 ANK1P16157 1881 aa31.71■■■□□ 2.67
PABPN1-201ENST00000216727 GPR25O00155 361 aa31.71■■■□□ 2.67
PABPN1-201ENST00000216727 NOMO3P69849 1222 aa31.71■■■□□ 2.67
PABPN1-201ENST00000216727 PPFIA1Q13136 1202 aa31.71■■■□□ 2.67
PABPN1-201ENST00000216727 MAATS1Q7Z4T9 603 aa31.71■■■□□ 2.67
PABPN1-201ENST00000216727 CDR2LQ86X02 465 aaPredicted RBP31.71■■■□□ 2.67
PABPN1-201ENST00000216727 CCDC26Q8TAB7 109 aa31.71■■■□□ 2.67
PABPN1-201ENST00000216727 CASKIN2Q8WXE0 1202 aa31.71■■■□□ 2.67
PABPN1-201ENST00000216727 PCDHA3Q9Y5H8 950 aa31.71■■■□□ 2.67
PABPN1-201ENST00000216727 HSPA6P17066 643 aa31.7■■■□□ 2.67
PABPN1-201ENST00000216727 GRIK4Q16099 956 aa31.7■■■□□ 2.67
PABPN1-201ENST00000216727 BTBD6Q96KE9 485 aa31.7■■■□□ 2.67
PABPN1-201ENST00000216727 GOLGA6L10A0A0M3HER8 536 aa31.7■■■□□ 2.66
PABPN1-201ENST00000216727 SPOPO43791 374 aa31.7■■■□□ 2.66
PABPN1-201ENST00000216727 OSTNP61366 133 aa31.7■■■□□ 2.66
PABPN1-201ENST00000216727 HSP90B2PQ58FF3 399 aa31.7■■■□□ 2.66
PABPN1-201ENST00000216727 PHF13Q86YI8 300 aaPredicted RBP31.7■■■□□ 2.66
PABPN1-201ENST00000216727 XYLT2Q9H1B5 865 aa31.7■■■□□ 2.66
PABPN1-201ENST00000216727 ESYT3A0FGR9 886 aa31.69■■■□□ 2.66
PABPN1-201ENST00000216727 POLR3GO15318 223 aaPredicted RBP31.69■■■□□ 2.66
PABPN1-201ENST00000216727 VTNP04004 478 aa31.69■■■□□ 2.66
PABPN1-201ENST00000216727 CXCL8P10145 99 aa31.69■■■□□ 2.66
PABPN1-201ENST00000216727 RRM1P23921 792 aa31.69■■■□□ 2.66
PABPN1-201ENST00000216727 MARCKSL1P49006 195 aa31.69■■■□□ 2.66
PABPN1-201ENST00000216727 ZNF211Q13398 564 aaPredicted RBP31.69■■■□□ 2.66
PABPN1-201ENST00000216727 KYAT1Q16773 422 aa31.69■■■□□ 2.66
PABPN1-201ENST00000216727 MARCH8Q5T0T0 291 aa31.69■■■□□ 2.66
PABPN1-201ENST00000216727 FAM71BQ8TC56 605 aa31.69■■■□□ 2.66
PABPN1-201ENST00000216727 PDZD7Q9H5P4 517 aa31.69■■■□□ 2.66
PABPN1-201ENST00000216727 ZCCHC17Q9NP64 241 aaKnown RBP31.69■■■□□ 2.66
PABPN1-201ENST00000216727 NFU1Q9UMS0 254 aa31.69■■■□□ 2.66
PABPN1-201ENST00000216727 THAP12O43422 761 aa31.68■■■□□ 2.66
PABPN1-201ENST00000216727 CUL1Q13616 776 aa31.68■■■□□ 2.66
PABPN1-201ENST00000216727 ZNF699Q32M78 642 aa31.68■■■□□ 2.66
PABPN1-201ENST00000216727 MORN1Q5T089 497 aa31.68■■■□□ 2.66
PABPN1-201ENST00000216727 ZNF606Q8WXB4 792 aa31.68■■■□□ 2.66
PABPN1-201ENST00000216727 IFT81Q8WYA0 676 aa31.68■■■□□ 2.66
PABPN1-201ENST00000216727 CCDC102AQ96A19 550 aa31.68■■■□□ 2.66
PABPN1-201ENST00000216727 TMEM192Q8IY95 271 aa31.68■■■□□ 2.66
PABPN1-201ENST00000216727 FAXDC2Q96IV6 333 aa31.68■■■□□ 2.66
PABPN1-201ENST00000216727 CISHQ9NSE2 258 aa31.68■■■□□ 2.66
PABPN1-201ENST00000216727 ANAPC7Q9UJX3 599 aa31.68■■■□□ 2.66
PABPN1-201ENST00000216727 CFHP08603 1231 aa31.67■■■□□ 2.66
PABPN1-201ENST00000216727 STAG3L1P0CL83 205 aa31.67■■■□□ 2.66
PABPN1-201ENST00000216727 LIN9Q5TKA1 542 aa31.67■■■□□ 2.66
PABPN1-201ENST00000216727 PLEKHA4Q9H4M7 779 aa31.67■■■□□ 2.66
PABPN1-201ENST00000216727 AMACRQ9UHK6 382 aa31.67■■■□□ 2.66
PABPN1-201ENST00000216727 NR2E1Q9Y466 385 aa31.67■■■□□ 2.66
PABPN1-201ENST00000216727 MROH7Q68CQ1 1323 aa31.67■■■□□ 2.66
PABPN1-201ENST00000216727 HUNKP57058 714 aa31.66■■■□□ 2.66
PABPN1-201ENST00000216727 C1QBPQ07021 282 aaKnown RBP31.66■■■□□ 2.66
PABPN1-201ENST00000216727 ZNF410Q86VK4 478 aa31.66■■■□□ 2.66
PABPN1-201ENST00000216727 WHAMMQ8TF30 809 aa31.66■■■□□ 2.66
PABPN1-201ENST00000216727 PRDM10Q9NQV6 1147 aa31.66■■■□□ 2.66
PABPN1-201ENST00000216727 CPA4Q9UI42 421 aa31.66■■■□□ 2.66
PABPN1-201ENST00000216727 ADCY6O43306 1168 aa31.66■■■□□ 2.66
PABPN1-201ENST00000216727 CSDE1O75534 798 aaKnown RBP31.66■■■□□ 2.66
PABPN1-201ENST00000216727 ARF4P18085 180 aaPredicted RBP31.66■■■□□ 2.66
PABPN1-201ENST00000216727 SLC1A1P43005 524 aa31.66■■■□□ 2.66
PABPN1-201ENST00000216727 ASPAP45381 313 aa31.66■■■□□ 2.66
PABPN1-201ENST00000216727 SEL1L2Q5TEA6 688 aa31.66■■■□□ 2.66
PABPN1-201ENST00000216727 NLRP7Q8WX94 980 aa31.66■■■□□ 2.66
PABPN1-201ENST00000216727 SEC14L1Q92503 715 aa31.66■■■□□ 2.66
PABPN1-201ENST00000216727 ASB7Q9H672 318 aa31.66■■■□□ 2.66
PABPN1-201ENST00000216727 ADAM22Q9P0K1 906 aa31.66■■■□□ 2.66
PABPN1-201ENST00000216727 RRN3P2A6NIE6 340 aa31.65■■■□□ 2.66
PABPN1-201ENST00000216727 MAP2K5Q13163 448 aa31.65■■■□□ 2.66
PABPN1-201ENST00000216727 KIAA0319LQ8IZA0 1049 aa31.65■■■□□ 2.66
PABPN1-201ENST00000216727 A6NJR5 290 aa31.65■■■□□ 2.66
PABPN1-201ENST00000216727 RWDD2BP57060 319 aa31.65■■■□□ 2.66
PABPN1-201ENST00000216727 YWHAEP62258 255 aaKnown RBP31.65■■■□□ 2.66
PABPN1-201ENST00000216727 PASD1Q8IV76 773 aa31.65■■■□□ 2.66
PABPN1-201ENST00000216727 PPP1R16BQ96T49 567 aa31.65■■■□□ 2.66
PABPN1-201ENST00000216727 MRPL47Q9HD33 250 aaKnown RBP31.65■■■□□ 2.66
PABPN1-201ENST00000216727 SLTMQ9NWH9 1034 aaKnown RBP eCLIP31.65■■■□□ 2.66
PABPN1-201ENST00000216727 LACTBL1A8MY62 500 aa31.64■■■□□ 2.66
PABPN1-201ENST00000216727 LSM8O95777 96 aaKnown RBP31.64■■■□□ 2.66
PABPN1-201ENST00000216727 PTP4A2Q12974 167 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms