RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 RTN4RL1Q86UN2 441 aaPredicted RBP13.98□□□□□ -0.17
PHGDH-218ENST00000641491 ZSWIM2Q8NEG5 633 aa13.98□□□□□ -0.17
PHGDH-218ENST00000641491 DDX27Q96GQ7 796 aaKnown RBP13.98□□□□□ -0.17
PHGDH-218ENST00000641491 INTS13Q9NVM9 706 aa13.98□□□□□ -0.17
PHGDH-218ENST00000641491 DPP3Q9NY33 737 aa13.98□□□□□ -0.17
PHGDH-218ENST00000641491 GCNT4Q9P109 453 aa13.98□□□□□ -0.17
PHGDH-218ENST00000641491 INSL6Q9Y581 213 aa13.98□□□□□ -0.17
PHGDH-218ENST00000641491 SPTBN5Q9NRC6 3674 aaKnown RBP13.97□□□□□ -0.17
PHGDH-218ENST00000641491 LGALS16A8MUM7 142 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 OFD1O75665 1012 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 ATP1A3P13637 1013 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 ZNF18P17022 549 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 OR1G1P47890 313 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 FMO5P49326 533 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 ALDH7A1P49419 539 aaKnown RBP13.97□□□□□ -0.17
PHGDH-218ENST00000641491 MRE11P49959 708 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 TNNC1P63316 161 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 TUSC3Q13454 348 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 EXOC3L4Q17RC7 722 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 ZNF699Q32M78 642 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 CMTR2Q8IYT2 770 aaKnown RBP13.97□□□□□ -0.17
PHGDH-218ENST00000641491 FIBCD1Q8N539 461 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 FBXL13Q8NEE6 735 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 SLC35C1Q96A29 364 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 FAM161BQ96MY7 647 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 POP1Q99575 1024 aaKnown RBP13.97□□□□□ -0.17
PHGDH-218ENST00000641491 IFNKQ9P0W0 207 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 MSRAQ9UJ68 235 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 RWDD3Q9Y3V2 267 aa13.97□□□□□ -0.17
PHGDH-218ENST00000641491 CASTOR2A6NHX0 329 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 PODXLO00592 558 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 TRAPPC3O43617 180 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 GJB5O95377 273 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 ITGB3P05106 788 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 LAG3P18627 525 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 POLR2BP30876 1174 aaKnown RBP13.96□□□□□ -0.17
PHGDH-218ENST00000641491 RPL9P32969 192 aaKnown RBP13.96□□□□□ -0.17
PHGDH-218ENST00000641491 DLG4P78352 724 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 NCOA4Q13772 614 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 TCTN1Q2MV58 587 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 SV2CQ496J9 727 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 CLLU1OSQ5K130 101 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 ZNF697Q5TEC3 545 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 TRAPPC11Q7Z392 1133 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 GAS2L3Q86XJ1 694 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 HERC6Q8IVU3 1022 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 FAM81BQ96LP2 452 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 MED15Q96RN5 788 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 RAD9AQ99638 391 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 COLEC11Q9BWP8 271 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 GRPEL1Q9HAV7 217 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 TBC1D13Q9NVG8 400 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 AGAP1Q9UPQ3 857 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 PCDHB12Q9Y5F1 795 aa13.96□□□□□ -0.17
PHGDH-218ENST00000641491 DNAH12Q6ZR08 3092 aa13.96□□□□□ -0.18
PHGDH-218ENST00000641491 MEIS3P2A8K0S8 358 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 DGKIO75912 1065 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 ALDH2P05091 517 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 PAX3P23760 479 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 ATICP31939 592 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 TAF6P49848 677 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 EPHB4P54760 987 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 YWHAEP62258 255 aaKnown RBP13.95□□□□□ -0.18
PHGDH-218ENST00000641491 BMS1Q14692 1282 aaKnown RBP13.95□□□□□ -0.18
PHGDH-218ENST00000641491 RAB30Q15771 203 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 SGSM1Q2NKQ1 1148 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 DSTYKQ6XUX3 929 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 SV2AQ7L0J3 742 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 EFCAB13Q8IY85 973 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 NEK11Q8NG66 645 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 TAF4BQ92750 862 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 C18orf25Q96B23 403 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-218ENST00000641491 ZNF558Q96NG5 402 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 NT5C1BQ96P26 610 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 CASD1Q96PB1 797 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 CDX2Q99626 313 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-218ENST00000641491 TMEM175Q9BSA9 504 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 RAB20Q9NX57 234 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 TUBGCP4Q9UGJ1 667 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 FAN1Q9Y2M0 1017 aa13.95□□□□□ -0.18
PHGDH-218ENST00000641491 GTPBP10A4D1E9 387 aaKnown RBP13.94□□□□□ -0.18
PHGDH-218ENST00000641491 PTGESO14684 152 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 TADA2AO75478 443 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 B3GAT3O94766 335 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 HLA-DRAP01903 254 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 PPM1AP35813 382 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 PPP3CAQ08209 521 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 TSR1Q2NL82 804 aaKnown RBP13.94□□□□□ -0.18
PHGDH-218ENST00000641491 ZACNQ401N2 412 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 XKR4Q5GH76 650 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 ZNF667Q5HYK9 610 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 TDRD10Q5VZ19 366 aaKnown RBP13.94□□□□□ -0.18
PHGDH-218ENST00000641491 ALKAL1Q6UXT8 129 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 C16orf59Q7L2K0 433 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 CACNA2D4Q7Z3S7 1137 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 PPFIBP1Q86W92 1011 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 METTL23Q86XA0 190 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 IRF2BP1Q8IU81 584 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 LRRC52Q8N7C0 313 aa13.94□□□□□ -0.18
PHGDH-218ENST00000641491 ZNF397Q8NF99 534 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms