RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 TFDP1Q14186 410 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 PABPC1LQ4VXU2 614 aaKnown RBP6.92□□□□□ -1.3
PRKCH-228ENST00000640011 UBXN11Q5T124 520 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 CREB3L3Q68CJ9 461 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 PRR23CQ6ZRP0 262 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 SPATA31D4Q6ZUB0 917 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 KSR1Q8IVT5 923 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 CCDC116Q8IYX3 515 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 FAM177A1Q8N128 213 aaPredicted RBP6.92□□□□□ -1.3
PRKCH-228ENST00000640011 RNF149Q8NC42 400 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 PIK3R5Q8WYR1 880 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 IRF7Q92985 503 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 ELSPBP1Q96BH3 223 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 CEP170P1Q96L14 293 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 GAD1Q99259 594 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 RPP25Q9BUL9 199 aaKnown RBP6.92□□□□□ -1.3
PRKCH-228ENST00000640011 GPR62Q9BZJ7 368 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 CHRDQ9H2X0 955 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 DHX33Q9H6R0 707 aaKnown RBP6.92□□□□□ -1.3
PRKCH-228ENST00000640011 TRPV5Q9NQA5 729 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 AVENQ9NQS1 362 aaPredicted RBP6.92□□□□□ -1.3
PRKCH-228ENST00000640011 SH3GLB2Q9NR46 395 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 SEMA4GQ9NTN9 838 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 POLIQ9UNA4 740 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 MTF2Q9Y483 593 aaPredicted RBP6.92□□□□□ -1.3
PRKCH-228ENST00000640011 FANCMQ8IYD8 2048 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 EVPLQ92817 2033 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 ASPMQ8IZT6 3477 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 KLF18A0A0U1RQI7 1052 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 ZNF197O14709 1029 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 MICAL2O94851 1124 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 STBD1O95210 358 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 MYBP10242 640 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 CD72P21854 359 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 TARSP26639 723 aaKnown RBP6.91□□□□□ -1.3
PRKCH-228ENST00000640011 CXCL12P48061 93 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 MLLT6P55198 1093 aaPredicted RBP6.91□□□□□ -1.3
PRKCH-228ENST00000640011 EXOSC10Q01780 885 aaKnown RBP6.91□□□□□ -1.3
PRKCH-228ENST00000640011 LAMTOR4Q0VGL1 99 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 MTAPQ13126 283 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 TUSC3Q13454 348 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 SIM2Q14190 667 aaPredicted RBP6.91□□□□□ -1.3
PRKCH-228ENST00000640011 HSP90AA2PQ14568 343 aaPredicted RBP6.91□□□□□ -1.3
PRKCH-228ENST00000640011 PSMD5Q16401 504 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 AXDND1Q5T1B0 1012 aaPredicted RBP6.91□□□□□ -1.3
PRKCH-228ENST00000640011 SLC27A1Q6PCB7 646 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 B3GNT9Q6UX72 402 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 PRR23BQ6ZRT6 265 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 ANO5Q75V66 913 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.91□□□□□ -1.3
PRKCH-228ENST00000640011 FERMT3Q86UX7 667 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 GLYCTKQ8IVS8 523 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 NPAS3Q8IXF0 933 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 C4orf19Q8IY42 314 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 SMG8Q8ND04 991 aaKnown RBP6.91□□□□□ -1.3
PRKCH-228ENST00000640011 PRPF31Q8WWY3 499 aaKnown RBP6.91□□□□□ -1.3
PRKCH-228ENST00000640011 RNF26Q9BY78 433 aaPredicted RBP6.91□□□□□ -1.3
PRKCH-228ENST00000640011 NFKBIZQ9BYH8 718 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 LSG1Q9H089 658 aaKnown RBP6.91□□□□□ -1.3
PRKCH-228ENST00000640011 PARD6AQ9NPB6 346 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 ANO2Q9NQ90 1003 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 TOR4AQ9NXH8 423 aa6.91□□□□□ -1.3
PRKCH-228ENST00000640011 MRPS23Q9Y3D9 190 aaKnown RBP6.91□□□□□ -1.3
PRKCH-228ENST00000640011 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.91□□□□□ -1.3
PRKCH-228ENST00000640011 MYH9P35579 1960 aaKnown RBP6.9□□□□□ -1.3
PRKCH-228ENST00000640011 C2orf16Q68DN1 1984 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 SFI1A8K8P3 1242 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 CCL16O15467 120 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 TRAPPC3O43617 180 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 TSPAN1O60635 241 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 PAPSS2O95340 614 aaPredicted RBP6.9□□□□□ -1.3
PRKCH-228ENST00000640011 TDGF1P13385 188 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 RPL17P18621 184 aaKnown RBP6.9□□□□□ -1.3
PRKCH-228ENST00000640011 PMLP29590 882 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 CDC27P30260 824 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 ATP1A2P50993 1020 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 PTENP60484 403 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 DHX9Q08211 1270 aaKnown RBP6.9□□□□□ -1.3
PRKCH-228ENST00000640011 SPIRE1Q08AE8 756 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 PPP2R5CQ13362 524 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 NNTQ13423 1086 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 RAB33AQ14088 237 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 LRRC32Q14392 662 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 RTP2Q5QGT7 225 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 GALNT17Q6IS24 598 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 TSSK4Q6SA08 328 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.9□□□□□ -1.3
PRKCH-228ENST00000640011 LONP2Q86WA8 852 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 CEP57Q86XR8 500 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 C12orf50Q8NA57 414 aaPredicted RBP6.9□□□□□ -1.3
PRKCH-228ENST00000640011 TPCN2Q8NHX9 752 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 SNIP1Q8TAD8 396 aaKnown RBP6.9□□□□□ -1.3
PRKCH-228ENST00000640011 LNX1Q8TBB1 728 aaPredicted RBP6.9□□□□□ -1.3
PRKCH-228ENST00000640011 SLC7A14Q8TBB6 771 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 ETNPPLQ8TBG4 499 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 FAM200AQ8TCP9 573 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 TBCKQ8TEA7 893 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 DEPDC1BQ8WUY9 529 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 FAM3CQ92520 227 aa6.9□□□□□ -1.3
PRKCH-228ENST00000640011 E2F7Q96AV8 911 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms