RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 TPD52L1Q16890 204 aaPredicted RBP10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 C1orf220Q5T0J3 134 aa10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 TMCO2Q7Z6W1 182 aaPredicted RBP10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 ABI1Q8IZP0 508 aa10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 RDH13Q8NBN7 331 aa10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 URGCPQ8TCY9 931 aa10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 SLC35C1Q96A29 364 aa10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 KCTD12Q96CX2 325 aaKnown RBP10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 RPS6KC1Q96S38 1066 aa10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 PDE11AQ9HCR9 933 aa10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 SAMSN1Q9NSI8 373 aaKnown RBP10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 TBC1D13Q9NVG8 400 aa10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 WDR70Q9NW82 654 aa10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 MIOSQ9NXC5 875 aa10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 KLK14Q9P0G3 267 aa10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 KANSL3Q9P2N6 904 aa10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 PLAGL2Q9UPG8 496 aa10.67□□□□□ -0.7
SOX2-OT-249ENST00000628810 BHMG1C9JSJ3 638 aaPredicted RBP10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 UPP2O95045 317 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 THP07101 528 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 LINC00271P0C7V0 271 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 KRT13P13646 458 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 GTF2H1P32780 548 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 GATMP50440 423 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 AP3M2P53677 418 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 DLG4P78352 724 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 SPAG1Q07617 926 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 TMEM132DQ14C87 1099 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 CCDC40Q4G0X9 1142 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 TCP11X2Q5H9J9 407 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 JADE1Q6IE81 842 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 C15orf39Q6ZRI6 1047 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 LUZP1Q86V48 1076 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 FNBP1Q96RU3 617 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 YME1L1Q96TA2 773 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 RAD9AQ99638 391 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 SLC38A7Q9NVC3 462 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 INTS13Q9NVM9 706 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 FANCLQ9NW38 375 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 UBQLN1Q9UMX0 589 aaKnown RBP10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 INSL6Q9Y581 213 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 CEP290O15078 2479 aa10.66□□□□□ -0.7
SOX2-OT-249ENST00000628810 KIAA1671Q9BY89 1806 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 TDRD15B5MCY1 1934 aaKnown RBP10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 CARNS1A5YM72 827 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 LRRC10BA6NIK2 292 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 GOLGA8CPA6NN73 597 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 TBKBP1A7MCY6 615 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 BECN2A8MW95 431 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 KCNJ18B7U540 433 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 PMM2O15305 246 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 XPOTO43592 962 aaKnown RBP10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 STX10O60499 249 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 B4GALT3O60512 393 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 POMCP01189 267 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 TRIM49P0CI25 452 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 TRIM49CP0CI26 452 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 PRKCSHP14314 528 aaPredicted RBP10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 IBSPP21815 317 aaPredicted RBP10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 LRPAP1P30533 357 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 SOX4Q06945 474 aaPredicted RBP10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 TUSC3Q13454 348 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 KCNJ12Q14500 433 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 GLRA4Q5JXX5 417 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 PRPF38BQ5VTL8 546 aaKnown RBP10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 FAM109BQ6ICB4 259 aaPredicted RBP10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 APTXQ7Z2E3 356 aaKnown RBP10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 COLGALT2Q8IYK4 626 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 CXorf38Q8TB03 319 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 ZNF516Q92618 1163 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 CLP1Q92989 425 aaKnown RBP10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 CCDC127Q96BQ5 260 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 UROC1Q96N76 676 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 TMEM175Q9BSA9 504 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 MTMR12Q9C0I1 747 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 CWH43Q9H720 699 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 TMEM8AQ9HCN3 771 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 MAGEC2Q9UBF1 373 aaPredicted RBP10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 TUBGCP4Q9UGJ1 667 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 LIMA1Q9UHB6 759 aaKnown RBP10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 ITGA11Q9UKX5 1188 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 INPP5FQ9Y2H2 1132 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 PCDHA11Q9Y5I1 949 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 PDE4DIPQ5VU43 2346 aa10.65□□□□□ -0.7
SOX2-OT-249ENST00000628810 GBF1Q92538 1859 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 ANO9A1A5B4 782 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 TMEM189-UBE2V1I3L0A0 370 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 TLL1O43897 1013 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 DDHD2O94830 711 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 C4BPAP04003 597 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 TMEM191BP0C7N4 346 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 DLATP10515 647 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 PPP3CAQ08209 521 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 BTG3Q14201 252 aaPredicted RBP10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 MAN2A1Q16706 1144 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 DUOXA2Q1HG44 320 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 ZACNQ401N2 412 aa10.64□□□□□ -0.71
SOX2-OT-249ENST00000628810 MIIPQ5JXC2 388 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms