RNA–Protein interactions for RNA: ENST00000623678.1

FP475955.3-201, humanhuman

TSL 1 (best) BASIC

Gene FP475955.3, Length 1,612 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FP475955.3-201ENST00000623678 TRIM49CP0CI26 452 aa13.04□□□□□ -0.32
FP475955.3-201ENST00000623678 MYOGP15173 224 aa13.04□□□□□ -0.32
FP475955.3-201ENST00000623678 TNNI1P19237 187 aa13.04□□□□□ -0.32
FP475955.3-201ENST00000623678 EEF1GP26641 437 aaKnown RBP13.04□□□□□ -0.32
FP475955.3-201ENST00000623678 LRPAP1P30533 357 aa13.04□□□□□ -0.32
FP475955.3-201ENST00000623678 AP3M2P53677 418 aa13.04□□□□□ -0.32
FP475955.3-201ENST00000623678 RNASELQ05823 741 aaKnown RBP13.04□□□□□ -0.32
FP475955.3-201ENST00000623678 LMBRD2Q68DH5 695 aaPredicted RBP13.04□□□□□ -0.32
FP475955.3-201ENST00000623678 C15orf39Q6ZRI6 1047 aa13.04□□□□□ -0.32
FP475955.3-201ENST00000623678 ZNF516Q92618 1163 aa13.04□□□□□ -0.32
FP475955.3-201ENST00000623678 FAM84AQ96KN4 292 aa13.04□□□□□ -0.32
FP475955.3-201ENST00000623678 UROC1Q96N76 676 aa13.04□□□□□ -0.32
FP475955.3-201ENST00000623678 GOLGA2P5Q9HBQ8 144 aa13.04□□□□□ -0.32
FP475955.3-201ENST00000623678 ANO9A1A5B4 782 aa13.03□□□□□ -0.32
FP475955.3-201ENST00000623678 SMTNL1A8MU46 457 aa13.03□□□□□ -0.32
FP475955.3-201ENST00000623678 ZC3H11AO75152 810 aaKnown RBP eCLIP13.03□□□□□ -0.32
FP475955.3-201ENST00000623678 TMEM191BP0C7N4 346 aa13.03□□□□□ -0.32
FP475955.3-201ENST00000623678 GTF2H1P32780 548 aa13.03□□□□□ -0.32
FP475955.3-201ENST00000623678 TFAMQ00059 246 aaKnown RBP13.03□□□□□ -0.32
FP475955.3-201ENST00000623678 PPP3CAQ08209 521 aa13.03□□□□□ -0.32
FP475955.3-201ENST00000623678 UPP1Q16831 310 aa13.03□□□□□ -0.32
FP475955.3-201ENST00000623678 DUOXA2Q1HG44 320 aa13.03□□□□□ -0.32
FP475955.3-201ENST00000623678 TCP11X2Q5H9J9 407 aa13.03□□□□□ -0.32
FP475955.3-201ENST00000623678 C1orf127Q8N9H9 656 aa13.03□□□□□ -0.32
FP475955.3-201ENST00000623678 BEST2Q8NFU1 509 aa13.03□□□□□ -0.32
FP475955.3-201ENST00000623678 CACTINQ8WUQ7 758 aaKnown RBP13.03□□□□□ -0.32
FP475955.3-201ENST00000623678 ANKRD36BP1Q96IX9 119 aa13.03□□□□□ -0.32
FP475955.3-201ENST00000623678 PAAF1Q9BRP4 392 aa13.03□□□□□ -0.32
FP475955.3-201ENST00000623678 ANP32EQ9BTT0 268 aa13.03□□□□□ -0.32
FP475955.3-201ENST00000623678 CARNS1A5YM72 827 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 CASTOR2A6NHX0 329 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 KCNJ18B7U540 433 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 TMEM189-UBE2V1I3L0A0 370 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 C4BPAP04003 597 aaKnown RBP13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 GALTP07902 379 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 LAG3P18627 525 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 DNAJB2P25686 324 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 RPL9P32969 192 aaKnown RBP13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 CLCNKBP51801 687 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 GUCY2FP51841 1108 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 BCAR1P56945 870 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 KCNJ12Q14500 433 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 ZACNQ401N2 412 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 HSP90AA4PQ58FG1 418 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 DCAF17Q5H9S7 520 aaPredicted RBP13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 TDRD10Q5VZ19 366 aaKnown RBP13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 TRAPPC11Q7Z392 1133 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 LUZP1Q86V48 1076 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 TMEM130Q8N3G9 435 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 FAM193BQ96PV7 902 aaPredicted RBP13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 MARCH5Q9NX47 278 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 DPP3Q9NY33 737 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 CACNG4Q9UBN1 327 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 SIX4Q9UIU6 781 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 ITGA11Q9UKX5 1188 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 RWDD3Q9Y3V2 267 aa13.02□□□□□ -0.32
FP475955.3-201ENST00000623678 BECN2A8MW95 431 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 PIRO00625 290 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 NRP1O14786 923 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 PMM2O15305 246 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 TNNC2P02585 160 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 ITGB3P05106 788 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 SLC11A1P49279 550 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 TAP1Q03518 808 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 TCERG1LQ5VWI1 586 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 C9orf57Q5W0N0 161 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 KCNT2Q6UVM3 1135 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 SV2AQ7L0J3 742 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 APTXQ7Z2E3 356 aaKnown RBP13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 SPRED2Q7Z698 418 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 TMEM173Q86WV6 379 aaPredicted RBP13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 COLGALT1Q8NBJ5 622 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 C3orf58Q8NDZ4 430 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 DDX27Q96GQ7 796 aaKnown RBP13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 TMEM8AQ9HCN3 771 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 MAGEC2Q9UBF1 373 aaPredicted RBP13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 MSRAQ9UJ68 235 aa13.02□□□□□ -0.33
FP475955.3-201ENST00000623678 C5orf67F2Z3F1 127 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 PODXLO00592 558 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 PPEF2O14830 753 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 STX10O60499 249 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 KIF4AO95239 1232 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 EFEMP2O95967 443 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 ATP1A3P13637 1013 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 PBX3P40426 434 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 GCLMP48507 274 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 MXI1P50539 228 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 KRT31Q15323 416 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 MAN2A1Q16706 1144 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 CBWD6Q4V339 395 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 CBWD3Q5JTY5 395 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 MIIPQ5JXC2 388 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 CBWD5Q5RIA9 395 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 KRT39Q6A163 491 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 SCARA3Q6AZY7 606 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 CD300LGQ6UXG3 332 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 SLC39A11Q8N1S5 342 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 ZNF558Q96NG5 402 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 SAMD11Q96NU1 681 aa13.01□□□□□ -0.33
FP475955.3-201ENST00000623678 NKX2-4Q9H2Z4 354 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms