RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 NOBOXO60393 691 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 B4GALT3O60512 393 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 B4GALT4O60513 344 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 TCEA3O75764 348 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 CNOT4O95628 575 aaKnown RBP6.03□□□□□ -1.44
CPNE3-213ENST00000622183 FOSP01100 380 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-213ENST00000622183 SNRPA1P09661 255 aaKnown RBP6.03□□□□□ -1.44
CPNE3-213ENST00000622183 SBK3P0C264 359 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 TSHRP16473 764 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 TNFSF4P23510 183 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 STT3AP46977 705 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 SOX8P57073 446 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 CHAF1AQ13111 956 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-213ENST00000622183 CCDC93Q567U6 631 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 IZUMO3Q5VZ72 239 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 BORAQ6PGQ7 559 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 FRMD5Q7Z6J6 570 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 SLC35B2Q8TB61 432 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 TNPO1Q92973 898 aaKnown RBP6.03□□□□□ -1.44
CPNE3-213ENST00000622183 MYOCQ99972 504 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 TCF25Q9BQ70 676 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 NDC1Q9BTX1 674 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 COLEC11Q9BWP8 271 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 DPH1Q9BZG8 443 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 AGO3Q9H9G7 860 aaKnown RBP6.03□□□□□ -1.44
CPNE3-213ENST00000622183 PNPLA8Q9NP80 782 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 TRMT13Q9NUP7 481 aaKnown RBP6.03□□□□□ -1.44
CPNE3-213ENST00000622183 STK32BQ9NY57 414 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 CPNE7Q9UBL6 633 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 AFF4Q9UHB7 1163 aaKnown RBP6.03□□□□□ -1.44
CPNE3-213ENST00000622183 MED16Q9Y2X0 877 aa6.03□□□□□ -1.44
CPNE3-213ENST00000622183 POM121BA6NF01 834 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 SLC43A1O75387 559 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 IL18RAPO95256 599 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 GNAI3P08754 354 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 HDCP19113 662 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 RAP1GAPP47736 663 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 TRAPPC10P48553 1259 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 SUMO3P55854 103 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-213ENST00000622183 GNAI1P63096 354 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 EXOSC9Q06265 439 aaKnown RBP6.02□□□□□ -1.45
CPNE3-213ENST00000622183 DAG1Q14118 895 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 KIF22Q14807 665 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 VMACQ2NL98 169 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 FAM209BQ5JX69 171 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 ZNF648Q5T619 568 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-213ENST00000622183 TCERG1LQ5VWI1 586 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 CIAPIN1Q6FI81 312 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 PLEKHH3Q7Z736 793 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 SESTD1Q86VW0 696 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 GPR135Q8IZ08 494 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 POU5F2Q8N7G0 328 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 NEIL1Q96FI4 390 aaPredicted RBP6.02□□□□□ -1.45
CPNE3-213ENST00000622183 P2RX7Q99572 595 aaKnown RBP6.02□□□□□ -1.45
CPNE3-213ENST00000622183 PACSIN1Q9BY11 444 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 SEC61A2Q9H9S3 476 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 ARFGAP3Q9NP61 516 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 RLIMQ9NVW2 624 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 FAM30AQ9NZY2 134 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 CFAP97Q9P2B7 532 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 OAZ3Q9UMX2 235 aa6.02□□□□□ -1.45
CPNE3-213ENST00000622183 TCRBV7S2A1N4TA0A589 114 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 PRSS29PA6NIE9 313 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 KIAA0391O15091 583 aaKnown RBP6.01□□□□□ -1.45
CPNE3-213ENST00000622183 GJB1P08034 283 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 SLC6A4P31645 630 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 CLRN1P58418 232 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 ZRSR2Q15696 482 aaKnown RBP6.01□□□□□ -1.45
CPNE3-213ENST00000622183 FAM214AQ32MH5 1076 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 C4orf46Q504U0 113 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 OGFOD2Q6N063 350 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 ZNF529Q6P280 563 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 SKAP1Q86WV1 359 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 NLGN4YQ8NFZ3 816 aaPredicted RBP6.01□□□□□ -1.45
CPNE3-213ENST00000622183 OR6B3Q8NGW1 331 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 BRI3BPQ8WY22 251 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 ARL8AQ96BM9 186 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 NMD3Q96D46 503 aaKnown RBP6.01□□□□□ -1.45
CPNE3-213ENST00000622183 DPYSL5Q9BPU6 564 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 ADAM7Q9H2U9 754 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 C12orf65Q9H3J6 166 aaKnown RBP6.01□□□□□ -1.45
CPNE3-213ENST00000622183 NELFAQ9H3P2 528 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 CERS4Q9HA82 394 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.01□□□□□ -1.45
CPNE3-213ENST00000622183 GPRC5BQ9NZH0 403 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 JKAMPQ9P055 326 aa6.01□□□□□ -1.45
CPNE3-213ENST00000622183 PNPLA7Q6ZV29 1317 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 TRIM43BA6NCK2 446 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 F5H423 210 aaPredicted RBP6□□□□□ -1.45
CPNE3-213ENST00000622183 F8W8V4 182 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 NCK2O43639 380 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 NUAK1O60285 661 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 STC2O76061 302 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 HAUS5O94927 633 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 AMHP03971 560 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 RARBP10826 455 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 ALAS1P13196 640 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 CR2P20023 1033 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 NOMO3P69849 1222 aa6□□□□□ -1.45
CPNE3-213ENST00000622183 HABP2Q14520 560 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms