RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 CASP4P49662 377 aa20.12■□□□□ 0.81
CIRBP-245ENST00000621399 GUCY2FP51841 1108 aa20.12■□□□□ 0.81
CIRBP-245ENST00000621399 PMS1P54277 932 aaKnown RBP20.12■□□□□ 0.81
CIRBP-245ENST00000621399 ERVFC1P60507 584 aa20.12■□□□□ 0.81
CIRBP-245ENST00000621399 LRRC63Q05C16 580 aa20.12■□□□□ 0.81
CIRBP-245ENST00000621399 CAMK1Q14012 370 aa20.12■□□□□ 0.81
CIRBP-245ENST00000621399 PSMD6Q15008 389 aa20.12■□□□□ 0.81
CIRBP-245ENST00000621399 TMC7Q7Z402 723 aa20.12■□□□□ 0.81
CIRBP-245ENST00000621399 EFCAB13Q8IY85 973 aa20.12■□□□□ 0.81
CIRBP-245ENST00000621399 VPS52Q8N1B4 723 aa20.12■□□□□ 0.81
CIRBP-245ENST00000621399 CACTINQ8WUQ7 758 aaKnown RBP20.12■□□□□ 0.81
CIRBP-245ENST00000621399 NELFBQ8WX92 580 aa20.12■□□□□ 0.81
CIRBP-245ENST00000621399 MFSD14AQ96MC6 490 aa20.12■□□□□ 0.81
CIRBP-245ENST00000621399 FNBP1Q96RU3 617 aa20.12■□□□□ 0.81
CIRBP-245ENST00000621399 TCF25Q9BQ70 676 aa20.12■□□□□ 0.81
CIRBP-245ENST00000621399 DPP3Q9NY33 737 aa20.12■□□□□ 0.81
CIRBP-245ENST00000621399 TRIM49BA6NDI0 452 aa20.11■□□□□ 0.81
CIRBP-245ENST00000621399 TMEM189-UBE2V1I3L0A0 370 aa20.11■□□□□ 0.81
CIRBP-245ENST00000621399 CETN3O15182 167 aa20.11■□□□□ 0.81
CIRBP-245ENST00000621399 DLATP10515 647 aaKnown RBP20.11■□□□□ 0.81
CIRBP-245ENST00000621399 LRPAP1P30533 357 aa20.11■□□□□ 0.81
CIRBP-245ENST00000621399 FUT10Q6P4F1 479 aa20.11■□□□□ 0.81
CIRBP-245ENST00000621399 TMEM130Q8N3G9 435 aa20.11■□□□□ 0.81
CIRBP-245ENST00000621399 MLKLQ8NB16 471 aa20.11■□□□□ 0.81
CIRBP-245ENST00000621399 VN1R3Q9BXE9 311 aa20.11■□□□□ 0.81
CIRBP-245ENST00000621399 ENTPD7Q9NQZ7 604 aa20.11■□□□□ 0.81
CIRBP-245ENST00000621399 CTNND2Q9UQB3 1225 aa20.11■□□□□ 0.81
CIRBP-245ENST00000621399 NUB1Q9Y5A7 615 aa20.11■□□□□ 0.81
CIRBP-245ENST00000621399 TDRD15B5MCY1 1934 aaKnown RBP20.1■□□□□ 0.81
CIRBP-245ENST00000621399 SF3B1O75533 1304 aaKnown RBP eCLIP20.1■□□□□ 0.812e-7■■□□□ 14.1
CIRBP-245ENST00000621399 BICDL2A1A5D9 508 aa20.1■□□□□ 0.81
CIRBP-245ENST00000621399 AKAP3O75969 853 aa20.1■□□□□ 0.81
CIRBP-245ENST00000621399 TMEM191BP0C7N4 346 aa20.1■□□□□ 0.81
CIRBP-245ENST00000621399 TNNI1P19237 187 aa20.1■□□□□ 0.81
CIRBP-245ENST00000621399 IRS1P35568 1242 aa20.1■□□□□ 0.81
CIRBP-245ENST00000621399 PSMC2P35998 433 aaKnown RBP20.1■□□□□ 0.81
CIRBP-245ENST00000621399 NLRP12P59046 1061 aa20.1■□□□□ 0.81
CIRBP-245ENST00000621399 FKBP3Q00688 224 aaKnown RBP20.1■□□□□ 0.81
CIRBP-245ENST00000621399 PAK1Q13153 545 aa20.1■□□□□ 0.81
CIRBP-245ENST00000621399 BMS1Q14692 1282 aaKnown RBP20.1■□□□□ 0.81
CIRBP-245ENST00000621399 DUOXA2Q1HG44 320 aa20.1■□□□□ 0.81
CIRBP-245ENST00000621399 LMBRD2Q68DH5 695 aaPredicted RBP20.1■□□□□ 0.81
CIRBP-245ENST00000621399 PDE12Q6L8Q7 609 aaKnown RBP20.1■□□□□ 0.81
CIRBP-245ENST00000621399 RBM43Q6ZSC3 357 aaKnown RBP20.1■□□□□ 0.81
CIRBP-245ENST00000621399 TAS1R1Q7RTX1 841 aa20.1■□□□□ 0.81
CIRBP-245ENST00000621399 WDR49Q8IV35 697 aa20.1■□□□□ 0.81
CIRBP-245ENST00000621399 MICALL1Q8N3F8 863 aa20.1■□□□□ 0.81
CIRBP-245ENST00000621399 C3orf58Q8NDZ4 430 aa20.1■□□□□ 0.81
CIRBP-245ENST00000621399 EEF2KMTQ96G04 330 aa20.1■□□□□ 0.81
CIRBP-245ENST00000621399 GPR62Q9BZJ7 368 aa20.1■□□□□ 0.81
CIRBP-245ENST00000621399 TRAPPC3O43617 180 aa20.09■□□□□ 0.81
CIRBP-245ENST00000621399 TNNC2P02585 160 aa20.09■□□□□ 0.81
CIRBP-245ENST00000621399 SOD2P04179 222 aa20.09■□□□□ 0.81
CIRBP-245ENST00000621399 IGFBP6P24592 240 aaPredicted RBP20.09■□□□□ 0.81
CIRBP-245ENST00000621399 CA8P35219 290 aa20.09■□□□□ 0.81
CIRBP-245ENST00000621399 STX17P56962 302 aa20.09■□□□□ 0.81
CIRBP-245ENST00000621399 TIGD5Q53EQ6 642 aa20.09■□□□□ 0.81
CIRBP-245ENST00000621399 PLPP4Q5VZY2 271 aa20.09■□□□□ 0.81
CIRBP-245ENST00000621399 C9orf57Q5W0N0 161 aa20.09■□□□□ 0.81
CIRBP-245ENST00000621399 CAVIN1Q6NZI2 390 aaKnown RBP20.09■□□□□ 0.81
CIRBP-245ENST00000621399 CD300LGQ6UXG3 332 aa20.09■□□□□ 0.81
CIRBP-245ENST00000621399 FAM186BQ8IYM0 893 aa20.09■□□□□ 0.81
CIRBP-245ENST00000621399 SYAP1Q96A49 352 aaPredicted RBP20.09■□□□□ 0.81
CIRBP-245ENST00000621399 ANKRD36BP1Q96IX9 119 aa20.09■□□□□ 0.81
CIRBP-245ENST00000621399 POP1Q99575 1024 aaKnown RBP20.09■□□□□ 0.81
CIRBP-245ENST00000621399 CGRRF1Q99675 332 aa20.09■□□□□ 0.81
CIRBP-245ENST00000621399 NGRNQ9NPE2 291 aaKnown RBP20.09■□□□□ 0.81
CIRBP-245ENST00000621399 INTS13Q9NVM9 706 aa20.09■□□□□ 0.81
CIRBP-245ENST00000621399 TMEM63CQ9P1W3 806 aa20.09■□□□□ 0.81
CIRBP-245ENST00000621399 PCDHGC5Q9Y5F6 944 aa20.09■□□□□ 0.81
CIRBP-245ENST00000621399 CITO14578 2027 aa20.09■□□□□ 0.81
CIRBP-245ENST00000621399 PTPRJQ12913 1337 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 FSCN2O14926 492 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 MAPK13O15264 365 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 CXCL14O95715 111 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 EFEMP2O95967 443 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 CTSAP10619 480 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 KRT13P13646 458 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 ELAVL2Q12926 359 aaKnown RBP20.08■□□□□ 0.81
CIRBP-245ENST00000621399 SMC1AQ14683 1233 aaKnown RBP20.08■□□□□ 0.81
CIRBP-245ENST00000621399 KLHL40Q2TBA0 621 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 USP41Q3LFD5 358 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 DPCR1Q3MIW9 517 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 FAM171A1Q5VUB5 890 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 KIAA1841Q6NSI8 718 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 TTI2Q6NXR4 508 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 SASS6Q6UVJ0 657 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 RNF168Q8IYW5 571 aaPredicted RBP20.08■□□□□ 0.81
CIRBP-245ENST00000621399 OR5B17Q8NGF7 314 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 FAM84AQ96KN4 292 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 HERC2P3Q9BVR0 1158 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 MTMR12Q9C0I1 747 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 ZBP1Q9H171 429 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 NSUN3Q9H649 340 aaKnown RBP20.08■□□□□ 0.81
CIRBP-245ENST00000621399 DACH1Q9UI36 760 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 STXBP5LQ9Y2K9 1186 aa20.08■□□□□ 0.81
CIRBP-245ENST00000621399 CUL9Q8IWT3 2517 aa20.08■□□□□ 0.8
CIRBP-245ENST00000621399 COL4A4P53420 1690 aaPredicted RBP20.07■□□□□ 0.8
CIRBP-245ENST00000621399 ANO9A1A5B4 782 aa20.07■□□□□ 0.8
CIRBP-245ENST00000621399 PIRO00625 290 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms