RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 LRPAP1P30533 357 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 CA8P35219 290 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 NRIP1P48552 1158 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 GLUD2P49448 558 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 CYP2J2P51589 502 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 WNT7BP56706 349 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 ELAVL2Q12926 359 aaKnown RBP19.83■□□□□ 0.77
LITAF-220ENST00000620789 COL19A1Q14993 1142 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 USP41Q3LFD5 358 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 ZNF658Q5TYW1 1059 aaPredicted RBP19.83■□□□□ 0.77
LITAF-220ENST00000620789 SPATA1Q5VX52 437 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 CD300LGQ6UXG3 332 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 CBWD2Q8IUF1 395 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 XXYLT1Q8NBI6 393 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 BEST2Q8NFU1 509 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 CDCA3Q99618 268 aaPredicted RBP19.83■□□□□ 0.77
LITAF-220ENST00000620789 IGFLR1Q9H665 355 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 PRDM6Q9NQX0 595 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 MRPL17Q9NRX2 175 aaKnown RBP19.83■□□□□ 0.77
LITAF-220ENST00000620789 CHST7Q9NS84 486 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 LMBRD1Q9NUN5 540 aa19.83■□□□□ 0.77
LITAF-220ENST00000620789 PER2O15055 1255 aa19.82■□□□□ 0.76
LITAF-220ENST00000620789 GTF2F1P35269 517 aaKnown RBP eCLIP19.82■□□□□ 0.76
LITAF-220ENST00000620789 GUCY2FP51841 1108 aa19.82■□□□□ 0.76
LITAF-220ENST00000620789 DSG1Q02413 1049 aa19.82■□□□□ 0.76
LITAF-220ENST00000620789 SNRNP35Q16560 246 aaKnown RBP19.82■□□□□ 0.76
LITAF-220ENST00000620789 DUSP6Q16828 381 aa19.82■□□□□ 0.76
LITAF-220ENST00000620789 NT5DC4Q86YG4 428 aa19.82■□□□□ 0.76
LITAF-220ENST00000620789 EFCAB13Q8IY85 973 aa19.82■□□□□ 0.76
LITAF-220ENST00000620789 SMYD4Q8IYR2 804 aaPredicted RBP19.82■□□□□ 0.76
LITAF-220ENST00000620789 TMEM130Q8N3G9 435 aa19.82■□□□□ 0.76
LITAF-220ENST00000620789 TMEM174Q8WUU8 243 aa19.82■□□□□ 0.76
LITAF-220ENST00000620789 HLA-CQ95604 372 aa19.82■□□□□ 0.76
LITAF-220ENST00000620789 PABPC5Q96DU9 382 aaKnown RBP19.82■□□□□ 0.76
LITAF-220ENST00000620789 GTPBP4Q9BZE4 634 aaKnown RBP19.82■□□□□ 0.76
LITAF-220ENST00000620789 COG5Q9UP83 839 aa19.82■□□□□ 0.76
LITAF-220ENST00000620789 SSX2IPQ9Y2D8 614 aa19.82■□□□□ 0.76
LITAF-220ENST00000620789 FSD2A1L4K1 749 aa19.81■□□□□ 0.76
LITAF-220ENST00000620789 TRAPPC3O43617 180 aa19.81■□□□□ 0.76
LITAF-220ENST00000620789 CALUO43852 315 aaPredicted RBP19.81■□□□□ 0.76
LITAF-220ENST00000620789 LILRB3O75022 631 aa19.81■□□□□ 0.76
LITAF-220ENST00000620789 CTC1Q2NKJ3 1217 aa19.81■□□□□ 0.76
LITAF-220ENST00000620789 COBLL1Q53SF7 1204 aa19.81■□□□□ 0.76
LITAF-220ENST00000620789 FAM171A1Q5VUB5 890 aa19.81■□□□□ 0.76
LITAF-220ENST00000620789 KIAA0319Q5VV43 1072 aa19.81■□□□□ 0.76
LITAF-220ENST00000620789 KIAA1841Q6NSI8 718 aa19.81■□□□□ 0.76
LITAF-220ENST00000620789 SLC9A9Q8IVB4 645 aa19.81■□□□□ 0.76
LITAF-220ENST00000620789 GPR65Q8IYL9 337 aa19.81■□□□□ 0.76
LITAF-220ENST00000620789 EFHBQ8N7U6 833 aa19.81■□□□□ 0.76
LITAF-220ENST00000620789 B3GALT6Q96L58 329 aa19.81■□□□□ 0.76
LITAF-220ENST00000620789 PDE11AQ9HCR9 933 aa19.81■□□□□ 0.76
LITAF-220ENST00000620789 THEGQ9P2T0 379 aa19.81■□□□□ 0.76
LITAF-220ENST00000620789 TRAF3IP3Q9Y228 551 aa19.81■□□□□ 0.76
LITAF-220ENST00000620789 SPTBN5Q9NRC6 3674 aaKnown RBP19.81■□□□□ 0.76
LITAF-220ENST00000620789 UNC80Q8N2C7 3258 aa19.8■□□□□ 0.76
LITAF-220ENST00000620789 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.8■□□□□ 0.76
LITAF-220ENST00000620789 GOLGA6L22H0YM25 854 aa19.8■□□□□ 0.76
LITAF-220ENST00000620789 TULP1O00294 542 aaPredicted RBP19.8■□□□□ 0.76
LITAF-220ENST00000620789 C2CD2LO14523 706 aa19.8■□□□□ 0.76
LITAF-220ENST00000620789 EXOC3O60645 756 aa19.8■□□□□ 0.76
LITAF-220ENST00000620789 BRCC3P46736 316 aa19.8■□□□□ 0.76
LITAF-220ENST00000620789 ADAM15Q13444 863 aa19.8■□□□□ 0.76
LITAF-220ENST00000620789 SURF1Q15526 300 aa19.8■□□□□ 0.76
LITAF-220ENST00000620789 RTP2Q5QGT7 225 aa19.8■□□□□ 0.76
LITAF-220ENST00000620789 RDH13Q8NBN7 331 aa19.8■□□□□ 0.76
LITAF-220ENST00000620789 TTPALQ9BTX7 342 aa19.8■□□□□ 0.76
LITAF-220ENST00000620789 UBE2ZQ9H832 354 aaPredicted RBP19.8■□□□□ 0.76
LITAF-220ENST00000620789 DMAC2Q9NW81 257 aa19.8■□□□□ 0.76
LITAF-220ENST00000620789 CLDND1Q9NY35 253 aa19.8■□□□□ 0.76
LITAF-220ENST00000620789 MAN1B1Q9UKM7 699 aa19.8■□□□□ 0.76
LITAF-220ENST00000620789 NUB1Q9Y5A7 615 aa19.8■□□□□ 0.76
LITAF-220ENST00000620789 LINC01565O15544 149 aa19.79■□□□□ 0.76
LITAF-220ENST00000620789 NR3C1P04150 777 aa19.79■□□□□ 0.76
LITAF-220ENST00000620789 PRCPP42785 496 aa19.79■□□□□ 0.76
LITAF-220ENST00000620789 MYBPC2Q14324 1141 aa19.79■□□□□ 0.76
LITAF-220ENST00000620789 CAMK4Q16566 473 aa19.79■□□□□ 0.76
LITAF-220ENST00000620789 C9orf57Q5W0N0 161 aa19.79■□□□□ 0.76
LITAF-220ENST00000620789 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.79■□□□□ 0.76
LITAF-220ENST00000620789 CEP57Q86XR8 500 aa19.79■□□□□ 0.76
LITAF-220ENST00000620789 RIN2Q8WYP3 895 aaPredicted RBP19.79■□□□□ 0.76
LITAF-220ENST00000620789 EMILIN2Q9BXX0 1053 aa19.79■□□□□ 0.76
LITAF-220ENST00000620789 RXFP1Q9HBX9 757 aa19.79■□□□□ 0.76
LITAF-220ENST00000620789 DPP3Q9NY33 737 aa19.79■□□□□ 0.76
LITAF-220ENST00000620789 ANO9A1A5B4 782 aa19.78■□□□□ 0.76
LITAF-220ENST00000620789 I3L4J1 428 aa19.78■□□□□ 0.76
LITAF-220ENST00000620789 PPEF2O14830 753 aa19.78■□□□□ 0.76
LITAF-220ENST00000620789 CLASP2O75122 1294 aaKnown RBP19.78■□□□□ 0.76
LITAF-220ENST00000620789 CNPP09543 421 aaKnown RBP19.78■□□□□ 0.76
LITAF-220ENST00000620789 FGFR3P22607 806 aa19.78■□□□□ 0.76
LITAF-220ENST00000620789 MCM4P33991 863 aa19.78■□□□□ 0.76
LITAF-220ENST00000620789 TFAMQ00059 246 aaKnown RBP19.78■□□□□ 0.76
LITAF-220ENST00000620789 CYP24A1Q07973 514 aa19.78■□□□□ 0.76
LITAF-220ENST00000620789 NFIL3Q16649 462 aa19.78■□□□□ 0.76
LITAF-220ENST00000620789 ZCWPW2Q504Y3 356 aa19.78■□□□□ 0.76
LITAF-220ENST00000620789 ISM2Q6H9L7 571 aa19.78■□□□□ 0.76
LITAF-220ENST00000620789 EP400NLQ6ZTU2 488 aa19.78■□□□□ 0.76
LITAF-220ENST00000620789 CACTINQ8WUQ7 758 aaKnown RBP19.78■□□□□ 0.76
LITAF-220ENST00000620789 PIK3R5Q8WYR1 880 aa19.78■□□□□ 0.76
LITAF-220ENST00000620789 KLHL5Q96PQ7 755 aa19.78■□□□□ 0.76
LITAF-220ENST00000620789 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms