RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 CGB2Q6NT52 195 aa17.06■□□□□ 0.32
DKC1-213ENST00000620277 ECHDC2Q86YB7 292 aa17.06■□□□□ 0.32
DKC1-213ENST00000620277 PSPC1Q8WXF1 523 aaKnown RBP17.06■□□□□ 0.32
DKC1-213ENST00000620277 IDI2Q9BXS1 227 aa17.06■□□□□ 0.32
DKC1-213ENST00000620277 TBX20Q9UMR3 447 aa17.06■□□□□ 0.32
DKC1-213ENST00000620277 SUGT1Q9Y2Z0 365 aa17.06■□□□□ 0.32
DKC1-213ENST00000620277 PCDHB4Q9Y5E5 795 aa17.06■□□□□ 0.32
DKC1-213ENST00000620277 UMODL1Q5DID0 1318 aa17.06■□□□□ 0.32
DKC1-213ENST00000620277 MROH7Q68CQ1 1323 aa17.06■□□□□ 0.32
DKC1-213ENST00000620277 NEFHP12036 1026 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 CA4P22748 312 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 EFTUD2Q15029 972 aaKnown RBP eCLIP17.05■□□□□ 0.324e-7■■■■□ 21.6
DKC1-213ENST00000620277 SLC15A2Q16348 729 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 MTERF2Q49AM1 385 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 KCNT1Q5JUK3 1230 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 ZBED8Q8IZ13 594 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 SHC3Q92529 594 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 TMEM143Q96AN5 459 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 CENPTQ96BT3 561 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 RSRC1Q96IZ7 334 aaKnown RBP17.05■□□□□ 0.32
DKC1-213ENST00000620277 RUNDC3BQ96NL0 473 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 FNBP1Q96RU3 617 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 DCLK3Q9C098 648 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 GABBR1Q9UBS5 961 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 DNPEPQ9ULA0 475 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 CCNE2O96020 404 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 PDHA1P08559 390 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 DSG3P32926 999 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 DRG2P55039 364 aaKnown RBP17.05■□□□□ 0.32
DKC1-213ENST00000620277 RPS6P62753 249 aaKnown RBP17.05■□□□□ 0.32
DKC1-213ENST00000620277 GPS1Q13098 491 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 SWSAP1Q6NVH7 229 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 SCARA5Q6ZMJ2 495 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 CDR2LQ86X02 465 aaPredicted RBP17.05■□□□□ 0.32
DKC1-213ENST00000620277 KIFAP3Q92845 792 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 ADAM22Q9P0K1 906 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 CNOT7Q9UIV1 285 aaKnown RBP17.05■□□□□ 0.32
DKC1-213ENST00000620277 BTAF1O14981 1849 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 C2orf71A6NGG8 1288 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 YDJCA8MPS7 323 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 MAP3K6O95382 1288 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 MSH2P43246 934 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 DMP1Q13316 513 aaPredicted RBP17.05■□□□□ 0.32
DKC1-213ENST00000620277 WNK4Q96J92 1243 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 TMEM121Q9BTD3 319 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 C1orf112Q9NSG2 853 aa17.05■□□□□ 0.32
DKC1-213ENST00000620277 SEPT9Q9UHD8 586 aaPredicted RBP17.05■□□□□ 0.32
DKC1-213ENST00000620277 ZMYND8Q9ULU4 1186 aaPredicted RBP17.05■□□□□ 0.32
DKC1-213ENST00000620277 AFF2P51816 1311 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 ADGRA3Q8IWK6 1321 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 NHSQ6T4R5 1651 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 PIK3R2O00459 728 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 TLR3O15455 904 aaKnown RBP17.04■□□□□ 0.32
DKC1-213ENST00000620277 WDR4P57081 412 aaKnown RBP17.04■□□□□ 0.32
DKC1-213ENST00000620277 ITIH4Q14624 930 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 DLGAP5Q15398 846 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 MIEF2Q96C03 454 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 RMDN3Q96TC7 470 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 OSBPL8Q9BZF1 889 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 MYLK2Q9H1R3 596 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 NKX1-2Q9UD57 310 aaPredicted RBP17.04■□□□□ 0.32
DKC1-213ENST00000620277 TMX2Q9Y320 296 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 ASTN2O75129 1339 aaPredicted RBP17.04■□□□□ 0.32
DKC1-213ENST00000620277 DHX15O43143 795 aaKnown RBP17.04■□□□□ 0.32
DKC1-213ENST00000620277 HSPA6P17066 643 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 MAGEA4P43358 317 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 OSTNP61366 133 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 WLSQ5T9L3 541 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 MIS18BP1Q6P0N0 1132 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 MCOLN2Q8IZK6 566 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 MASTLQ96GX5 879 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 ARL2BPQ9Y2Y0 163 aa17.04■□□□□ 0.32
DKC1-213ENST00000620277 DNAH12Q6ZR08 3092 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 PIK3CDO00329 1044 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 CYP1A2P05177 515 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 GHRP10912 638 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 IVDP26440 423 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 RPA3P35244 121 aaPredicted RBP17.03■□□□□ 0.32
DKC1-213ENST00000620277 PIK3CAP42336 1068 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 MMP14P50281 582 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 ARSEP51690 589 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 CYP4A22Q5TCH4 519 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 PCNX4Q63HM2 1172 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 SLC39A4Q6P5W5 647 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 ANO5Q75V66 913 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 C3orf20Q8ND61 904 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 ZNF516Q92618 1163 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 PLVAPQ9BX97 442 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 EHMT1Q9H9B1 1298 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 ZNF277Q9NRM2 450 aaPredicted RBP17.03■□□□□ 0.32
DKC1-213ENST00000620277 F8VP50 259 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 SGK1O00141 431 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 CLEC16AQ2KHT3 1053 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 ZWILCHQ9H900 591 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 NPHS2Q9NP85 383 aa17.03■□□□□ 0.32
DKC1-213ENST00000620277 GRIN3BO60391 1043 aa17.02■□□□□ 0.32
DKC1-213ENST00000620277 GZMAP12544 262 aa17.02■□□□□ 0.32
DKC1-213ENST00000620277 ITIH2P19823 946 aa17.02■□□□□ 0.32
DKC1-213ENST00000620277 BRDTQ58F21 947 aaPredicted RBP17.02■□□□□ 0.32
DKC1-213ENST00000620277 TRMT10CQ7L0Y3 403 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms