RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 RBM41Q96IZ5 413 aaKnown RBP13.26□□□□□ -0.29
TCF4-248ENST00000616053 PPP1R36Q96LQ0 422 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 C1QTNF7Q9BXJ2 289 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 ELL3Q9HB65 397 aaPredicted RBP13.26□□□□□ -0.29
TCF4-248ENST00000616053 SAYSD1Q9NPB0 183 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 SLC38A7Q9NVC3 462 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 LIMA1Q9UHB6 759 aaKnown RBP13.26□□□□□ -0.29
TCF4-248ENST00000616053 RNF103O00237 685 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 CYP27B1O15528 508 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 SEC24DO94855 1032 aaPredicted RBP13.26□□□□□ -0.29
TCF4-248ENST00000616053 HLA-DQA2P01906 255 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 POLE2P56282 527 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 BIKQ13323 160 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 FAM102AQ5T9C2 384 aaPredicted RBP13.26□□□□□ -0.29
TCF4-248ENST00000616053 PLEKHM2Q8IWE5 1019 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 CINPQ9BW66 212 aaPredicted RBP13.26□□□□□ -0.29
TCF4-248ENST00000616053 EMILIN2Q9BXX0 1053 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 DYRK1BQ9Y463 629 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 SESN1Q9Y6P5 492 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 C3orf70A6NLC5 250 aaPredicted RBP13.26□□□□□ -0.29
TCF4-248ENST00000616053 CHRM3P20309 590 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 KLRC2P26717 231 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 THOP1P52888 689 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 MAGEF1Q9HAY2 307 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 COPG2Q9UBF2 871 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 VPS51Q9UID3 782 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 SPEF1Q9Y4P9 236 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 ADCY6O43306 1168 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 UXS1Q8NBZ7 420 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 ARHGAP45Q92619 1136 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 CRELD1Q96HD1 420 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 FAM213AQ9BRX8 229 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 TRPM5Q9NZQ8 1165 aa13.26□□□□□ -0.29
TCF4-248ENST00000616053 LAD1O00515 517 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 RPSAP08865 295 aaKnown RBP13.25□□□□□ -0.29
TCF4-248ENST00000616053 MYL4P12829 197 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 STAT3P40763 770 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 DDX39BQ13838 428 aaKnown RBP13.25□□□□□ -0.29
TCF4-248ENST00000616053 AGMOQ6ZNB7 445 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 FOXP4Q8IVH2 680 aaPredicted RBP13.25□□□□□ -0.29
TCF4-248ENST00000616053 COLGALT2Q8IYK4 626 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 TSPAN17Q96FV3 270 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 CHMP2BQ9UQN3 213 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 ERICH3Q5RHP9 1530 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.25□□□□□ -0.29
TCF4-248ENST00000616053 CHUKO15111 745 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 DNAJB2P25686 324 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 CPT1AP50416 773 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 ZNF177Q13360 481 aaPredicted RBP13.25□□□□□ -0.29
TCF4-248ENST00000616053 JAMLQ86YT9 394 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 IL2P60568 153 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 ACAD9Q9H845 621 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 TMEM39AQ9NV64 488 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 CASP14P31944 242 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 TMEM62Q0P6H9 643 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 DHX34Q14147 1143 aaKnown RBP13.25□□□□□ -0.29
TCF4-248ENST00000616053 TTLL9Q3SXZ7 439 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 SWSAP1Q6NVH7 229 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 LCMT1Q9UIC8 334 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 ADGRF5Q8IZF2 1346 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 PIK3CDO00329 1044 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 UMPSP11172 480 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 RANBP1P43487 201 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 TRADDQ15628 312 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 EDRF1Q3B7T1 1238 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 CDKL3Q8IVW4 592 aaPredicted RBP13.25□□□□□ -0.29
TCF4-248ENST00000616053 USP13Q92995 863 aaPredicted RBP13.25□□□□□ -0.29
TCF4-248ENST00000616053 MYO18AQ92614 2054 aaKnown RBP13.25□□□□□ -0.29
TCF4-248ENST00000616053 H3BMM5 538 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 CSNK2BP67870 215 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 FAM133BQ5BKY9 247 aaKnown RBP13.25□□□□□ -0.29
TCF4-248ENST00000616053 PPP4R3CPQ6ZMV5 832 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 FAM133AQ8N9E0 248 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 VPS33AQ96AX1 596 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 PDCD10Q9BUL8 212 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 ARHGEF38Q9NXL2 777 aa13.25□□□□□ -0.29
TCF4-248ENST00000616053 MAPK13O15264 365 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 PEX14O75381 377 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 EPHB3P54753 998 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 MRPS35P82673 323 aaKnown RBP13.24□□□□□ -0.29
TCF4-248ENST00000616053 USP33Q8TEY7 942 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 PCP11498 1178 aaKnown RBP13.24□□□□□ -0.29
TCF4-248ENST00000616053 SLC11A2P49281 568 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 ROR1Q01973 937 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 BEND6Q5SZJ8 279 aaPredicted RBP13.24□□□□□ -0.29
TCF4-248ENST00000616053 IQCF2Q8IXL9 164 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 TBCKQ8TEA7 893 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 IMPAD1Q9NX62 359 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 SYNPO2Q9UMS6 1093 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 CCL15-CCL14A0A0B4J2E2 113 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 KRT16P08779 473 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 TYK2P29597 1187 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 BCAR1P56945 870 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 CCL15Q16663 113 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 TMEM179Q6ZVK1 233 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 CDR2LQ86X02 465 aaPredicted RBP13.24□□□□□ -0.29
TCF4-248ENST00000616053 ANAPC7Q9UJX3 599 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 PFKFB2O60825 505 aa13.24□□□□□ -0.29
TCF4-248ENST00000616053 ZNF189O75820 626 aaPredicted RBP13.24□□□□□ -0.29
TCF4-248ENST00000616053 KCTD16Q68DU8 428 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms