RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 CCDC126Q96EE4 140 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 NACC1Q96RE7 527 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 ING4Q9UNL4 249 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 FAM32AQ9Y421 112 aaKnown RBP9.2□□□□□ -0.94
TTC28-208ENST00000612946 ATP5J2-PTCD1G3V325 749 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 PTCD1O75127 700 aaKnown RBP9.2□□□□□ -0.94
TTC28-208ENST00000612946 IL6P05231 212 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 NAB2Q15742 525 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 USP38Q8NB14 1042 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.2□□□□□ -0.94
TTC28-208ENST00000612946 WDR17Q8IZU2 1322 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 SAT1P21673 171 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 PRAMEP78395 509 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 OSCP1Q8WVF1 389 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 RBM15Q96T37 977 aaKnown RBP eCLIP9.2□□□□□ -0.94
TTC28-208ENST00000612946 TRIM51Q9BSJ1 452 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 ZBTB3Q9H5J0 574 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 ASNSD1Q9NWL6 643 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 HDAC6Q9UBN7 1215 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 NPR3P17342 541 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 GRK2P25098 689 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 RAD23AP54725 363 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 NPEPPSP55786 919 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 LRRC8DQ7L1W4 858 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 BTBD10Q9BSF8 475 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 ATPIF1Q9UII2 106 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 COG2Q14746 738 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 SLFN12LQ6IEE8 588 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 ARHGEF19Q8IW93 802 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 RCOR2Q8IZ40 523 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 ZNF564Q8TBZ8 553 aaPredicted RBP9.2□□□□□ -0.94
TTC28-208ENST00000612946 DCAF5Q96JK2 942 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 BTBD18B2RXH4 712 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 PDHBP11177 359 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 TECP42680 631 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 PTH1RQ03431 593 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 BDH2Q9BUT1 245 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 PSTPIP2Q9H939 334 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 CRNNQ9UBG3 495 aaPredicted RBP9.2□□□□□ -0.94
TTC28-208ENST00000612946 ADAMTS1Q9UHI8 967 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 DMRT2Q9Y5R5 561 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 PXDNLA1KZ92 1463 aa9.2□□□□□ -0.94
TTC28-208ENST00000612946 MFN2O95140 757 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 ACAT1P24752 427 aaKnown RBP9.19□□□□□ -0.94
TTC28-208ENST00000612946 PSMA2P25787 234 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 TARSP26639 723 aaKnown RBP9.19□□□□□ -0.94
TTC28-208ENST00000612946 NCAPHQ15003 741 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 TYSND1Q2T9J0 566 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 C1orf131Q8NDD1 294 aaKnown RBP9.19□□□□□ -0.94
TTC28-208ENST00000612946 NLRP4Q96MN2 994 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 MED14O60244 1454 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 PSMD3O43242 534 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 PRKAA2P54646 552 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 ROR1Q01973 937 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 PDIA2Q13087 525 aaKnown RBP9.19□□□□□ -0.94
TTC28-208ENST00000612946 MMRN1Q13201 1228 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 PLS1Q14651 629 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 ODR4Q5SWX8 454 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 TCAIMQ8N3R3 496 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 MMS19Q96T76 1030 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 PIK3R1P27986 724 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 CCT3P49368 545 aaKnown RBP9.19□□□□□ -0.94
TTC28-208ENST00000612946 ZNF846Q147U1 533 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 SH2D3CQ8N5H7 860 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 PNPLA3Q9NST1 481 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 BFARQ9NZS9 450 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 SLC24A2Q9UI40 661 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 TRMT6Q9UJA5 497 aaKnown RBP9.19□□□□□ -0.94
TTC28-208ENST00000612946 TTLL3Q9Y4R7 772 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 TET3O43151 1660 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 FRMPD1Q5SYB0 1578 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 EIF4A2Q14240 407 aaKnown RBP9.19□□□□□ -0.94
TTC28-208ENST00000612946 LRRC6Q86X45 466 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 P3H2Q8IVL5 708 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 DENND6AQ8IWF6 608 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 RBM12BQ8IXT5 1001 aaKnown RBP9.19□□□□□ -0.94
TTC28-208ENST00000612946 EFCAB1Q9HAE3 211 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 CEP152O94986 1710 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 KRT17Q04695 432 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 PAPD7Q5XG87 772 aaKnown RBP9.19□□□□□ -0.94
TTC28-208ENST00000612946 KRCC1Q9NPI7 259 aaPredicted RBP9.19□□□□□ -0.94
TTC28-208ENST00000612946 TP53INP1Q96A56 240 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 DDX47Q9H0S4 455 aaKnown RBP9.19□□□□□ -0.94
TTC28-208ENST00000612946 TBCCD1Q9NVR7 557 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 SH2B2O14492 632 aaPredicted RBP9.19□□□□□ -0.94
TTC28-208ENST00000612946 RAD51BO15315 384 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 SNRPAP09012 282 aaKnown RBP9.19□□□□□ -0.94
TTC28-208ENST00000612946 GEMIN4P57678 1058 aaKnown RBP9.19□□□□□ -0.94
TTC28-208ENST00000612946 SLC45A4Q5BKX6 768 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 TPH2Q8IWU9 490 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 KBTBD8Q8NFY9 601 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 AP3S1Q92572 193 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 RUBCNLQ9H714 662 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 PLCG1P19174 1290 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 HK2P52789 917 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 ADCY1Q08828 1119 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 RHPN2Q8IUC4 686 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 ACTRT1Q8TDG2 376 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 COPRSQ9NQ92 184 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 ANAPC7Q9UJX3 599 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms