RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 NBPF9Q3BBW0 867 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 TRAPPC11Q7Z392 1133 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 RASSF3Q86WH2 238 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 DDX27Q96GQ7 796 aaKnown RBP15.04■□□□□ -0
PCDHB16-201ENST00000609684 RIOX1Q9H6W3 641 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 ALG13Q9NP73 1137 aaKnown RBP15.04■□□□□ -0
PCDHB16-201ENST00000609684 SCOCQ9UIL1 159 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 CDH16O75309 829 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 RARBP10826 455 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 FSCBQ5H9T9 825 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 ILDR1Q86SU0 546 aaPredicted RBP15.04■□□□□ -0
PCDHB16-201ENST00000609684 GPRASP2Q96D09 838 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 FGD4Q96M96 766 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 ZIM3Q96PE6 472 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 PRMT1Q99873 361 aaKnown RBP15.04■□□□□ -0
PCDHB16-201ENST00000609684 THAP2Q9H0W7 228 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 FAM96AQ9H5X1 160 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 IL17RBQ9NRM6 502 aa15.04■□□□□ -0
PCDHB16-201ENST00000609684 RIMS1Q86UR5 1692 aaKnown RBP15.03■□□□□ -0
PCDHB16-201ENST00000609684 IQCA1LA6NCM1 817 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 SMIM24O75264 130 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 GH1P01241 217 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 SESN2P58004 480 aaPredicted RBP15.03■□□□□ -0
PCDHB16-201ENST00000609684 GIT2Q14161 759 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 STILQ15468 1287 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 TMCO4Q5TGY1 634 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 URGCPQ8TCY9 931 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 SENP1Q9P0U3 644 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 HACL1Q9UJ83 578 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 CAPN6Q9Y6Q1 641 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 TCP11X1B4DZS4 312 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 FOXP2O15409 715 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 MAGEB2O15479 319 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 DIAPH2O60879 1101 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 APRTP07741 180 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 PPARGP37231 505 aaPredicted RBP15.03■□□□□ -0
PCDHB16-201ENST00000609684 TMEM62Q0P6H9 643 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 HSP90AA5PQ58FG0 334 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 CENPPQ6IPU0 288 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 ACAD11Q709F0 780 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 CHST13Q8NET6 341 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 TPCN2Q8NHX9 752 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 GCNAQ96QF7 691 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 SMYD3Q9H7B4 428 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 GSTA4O15217 222 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 GRAP2O75791 330 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 CHN1P15882 459 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 ACTR2P61160 394 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 BTBD8Q5XKL5 378 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 GPAT2Q6NUI2 795 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 COL23A1Q86Y22 540 aaPredicted RBP15.03■□□□□ -0
PCDHB16-201ENST00000609684 RDM1Q8NG50 284 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 ERP44Q9BS26 406 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 NIF3L1Q9GZT8 377 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 DBR1Q9UK59 544 aaKnown RBP15.03■□□□□ -0
PCDHB16-201ENST00000609684 POLIQ9UNA4 740 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 PPP1R12AO14974 1030 aaPredicted RBP15.03■□□□□ -0
PCDHB16-201ENST00000609684 CHUKO15111 745 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 GTF2H1P32780 548 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 CDK17Q00537 523 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 CDC26Q8NHZ8 85 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 PNKPQ96T60 521 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 UPF3AQ9H1J1 476 aaKnown RBP15.03■□□□□ -0
PCDHB16-201ENST00000609684 ISCUQ9H1K1 167 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 EPN3Q9H201 632 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 EHD4Q9H223 541 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 NEU2Q9Y3R4 380 aa15.03■□□□□ -0
PCDHB16-201ENST00000609684 FOXN3O00409 490 aaPredicted RBP15.02■□□□□ -0
PCDHB16-201ENST00000609684 TNPO2O14787 897 aaKnown RBP15.02■□□□□ -0
PCDHB16-201ENST00000609684 ATP9BO43861 1147 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 RPS12P25398 132 aaKnown RBP15.02■□□□□ -0
PCDHB16-201ENST00000609684 CYP2C19P33261 490 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 FIGNQ5HY92 759 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 APPL2Q8NEU8 664 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 LACRTQ9GZZ8 138 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 ECT2Q9H8V3 914 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 RAB6BQ9NRW1 208 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 EIF3HO15372 352 aaKnown RBP eCLIP15.02■□□□□ -0
PCDHB16-201ENST00000609684 PDGFRBP09619 1106 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 IL1R1P14778 569 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 NSUN2Q08J23 767 aaKnown RBP eCLIP15.02■□□□□ -0
PCDHB16-201ENST00000609684 IER5Q5VY09 327 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 MFSD14CQ5VZR4 134 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 CBWD2Q8IUF1 395 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 TTC8Q8TAM2 541 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 PARD3BQ8TEW8 1205 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 ZKSCAN4Q969J2 545 aaPredicted RBP15.02■□□□□ -0
PCDHB16-201ENST00000609684 ATXN7L3BQ96GX2 97 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 GMCL1Q96IK5 515 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 CCT8L2Q96SF2 557 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 MAGEB5Q9BZ81 275 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 ZFATQ9P243 1243 aa15.02■□□□□ -0
PCDHB16-201ENST00000609684 CFAP69A5D8W1 941 aa15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 SULT1E1P49888 294 aa15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 R3HDM1Q15032 1099 aaKnown RBP15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 KRT80Q6KB66 452 aa15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 EFCAB12Q6NXP0 572 aa15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 RAPGEF5Q92565 580 aa15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 GRAMD1AQ96CP6 724 aa15.02□□□□□ -0.01
PCDHB16-201ENST00000609684 BTBD6Q96KE9 485 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms