RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 C18orf25Q96B23 403 aaPredicted RBP14.09□□□□□ -0.15
SRRM1-223ENST00000600523 ANKRD36BP1Q96IX9 119 aa14.09□□□□□ -0.15
SRRM1-223ENST00000600523 HERC2P3Q9BVR0 1158 aa14.09□□□□□ -0.15
SRRM1-223ENST00000600523 ZBP1Q9H171 429 aa14.09□□□□□ -0.15
SRRM1-223ENST00000600523 IGFLR1Q9H665 355 aa14.09□□□□□ -0.15
SRRM1-223ENST00000600523 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.09□□□□□ -0.15
SRRM1-223ENST00000600523 LMBRD1Q9NUN5 540 aa14.09□□□□□ -0.15
SRRM1-223ENST00000600523 MARCH5Q9NX47 278 aa14.09□□□□□ -0.15
SRRM1-223ENST00000600523 DPP3Q9NY33 737 aa14.09□□□□□ -0.15
SRRM1-223ENST00000600523 TUBGCP4Q9UGJ1 667 aa14.09□□□□□ -0.15
SRRM1-223ENST00000600523 DPP7Q9UHL4 492 aa14.09□□□□□ -0.15
SRRM1-223ENST00000600523 COG5Q9UP83 839 aa14.09□□□□□ -0.15
SRRM1-223ENST00000600523 FSCN2O14926 492 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 NFICP08651 508 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 TNNI1P19237 187 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 PTMSP20962 102 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 NR2F2P24468 414 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 LRPAP1P30533 357 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 IRS1P35568 1242 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 NRIP1P48552 1158 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 CAMK1Q14012 370 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 ZBTB6Q15916 424 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 DUOXA2Q1HG44 320 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 EDRF1Q3B7T1 1238 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 COBLL1Q53SF7 1204 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 CEP135Q66GS9 1140 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 CRELD2Q6UXH1 353 aaPredicted RBP14.08□□□□□ -0.16
SRRM1-223ENST00000600523 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.08□□□□□ -0.16
SRRM1-223ENST00000600523 RBM23Q86U06 439 aaKnown RBP14.08□□□□□ -0.16
SRRM1-223ENST00000600523 CEP57Q86XR8 500 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 CBWD2Q8IUF1 395 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 GPR65Q8IYL9 337 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 TMEM174Q8WUU8 243 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 ERCC4Q92889 916 aaPredicted RBP14.08□□□□□ -0.16
SRRM1-223ENST00000600523 HLA-CQ95604 372 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 DHTKD1Q96HY7 919 aaPredicted RBP14.08□□□□□ -0.16
SRRM1-223ENST00000600523 FBXL18Q96ME1 805 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 PAAF1Q9BRP4 392 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 TTPALQ9BTX7 342 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 CXCL16Q9H2A7 254 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 KCTD10Q9H3F6 313 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 CLSTN2Q9H4D0 955 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 GOLGA2P5Q9HBQ8 144 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 KIAA1468Q9P260 1216 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 MAN1B1Q9UKM7 699 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 TRAF3IP3Q9Y228 551 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 IRAK3Q9Y616 596 aa14.08□□□□□ -0.16
SRRM1-223ENST00000600523 BICDL2A1A5D9 508 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 C2orf71A6NGG8 1288 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 SPDYE4A6NLX3 237 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 C2CD2LO14523 706 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 CETN3O15182 167 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 ADH1AP07327 375 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 DLATP10515 647 aaKnown RBP14.07□□□□□ -0.16
SRRM1-223ENST00000600523 KRT13P13646 458 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 KLRC2P26717 231 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 PNPLA4P41247 253 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 PRCPP42785 496 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 AP3M2P53677 418 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 LRRC63Q05C16 580 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 SOX4Q06945 474 aaPredicted RBP14.07□□□□□ -0.16
SRRM1-223ENST00000600523 NFIL3Q16649 462 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 DSTYKQ6XUX3 929 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 WDR49Q8IV35 697 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 SMYD4Q8IYR2 804 aaPredicted RBP14.07□□□□□ -0.16
SRRM1-223ENST00000600523 APPL2Q8NEU8 664 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 BCL7CQ8WUZ0 217 aaPredicted RBP14.07□□□□□ -0.16
SRRM1-223ENST00000600523 RIN2Q8WYP3 895 aaPredicted RBP14.07□□□□□ -0.16
SRRM1-223ENST00000600523 CCDC127Q96BQ5 260 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 ZNF560Q96MR9 790 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 GPR62Q9BZJ7 368 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 PDE11AQ9HCR9 933 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 CLDND1Q9NY35 253 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 CACNG4Q9UBN1 327 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 DACH1Q9UI36 760 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 ITGA11Q9UKX5 1188 aa14.07□□□□□ -0.16
SRRM1-223ENST00000600523 H7C4K7 107 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 BIN1O00499 593 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 SYN3O14994 580 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 CLSTN1O94985 981 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 SLC34A2O95436 690 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 KRT19P08727 400 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 EPB41P11171 864 aaKnown RBP14.06□□□□□ -0.16
SRRM1-223ENST00000600523 PSMC2P35998 433 aaKnown RBP14.06□□□□□ -0.16
SRRM1-223ENST00000600523 NDUFV1P49821 464 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 DSG1Q02413 1049 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 CYP24A1Q07973 514 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 HYAL1Q12794 435 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 MYO1EQ12965 1108 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 ADAM9Q13443 819 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 PSMD6Q15008 389 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 PTPN14Q15678 1187 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 DUSP6Q16828 381 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 SV2CQ496J9 727 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 C9orf57Q5W0N0 161 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 ISM2Q6H9L7 571 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 ANKS3Q6ZW76 656 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 EFHBQ8N7U6 833 aa14.06□□□□□ -0.16
SRRM1-223ENST00000600523 PABPC5Q96DU9 382 aaKnown RBP14.06□□□□□ -0.16
SRRM1-223ENST00000600523 CHST7Q9NS84 486 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms