RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 XYLBO75191 536 aa13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 CEBPBP17676 345 aa13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 PROZP22891 400 aa13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 YARSP54577 528 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 ARPP19P56211 112 aa13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 CACNB1Q02641 598 aaPredicted RBP13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 SNW1Q13573 536 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 PDIA5Q14554 519 aa13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 PABPC1LQ4VXU2 614 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 XKR4Q5GH76 650 aa13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 VARS2Q5ST30 1063 aaKnown RBP13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 KRT79Q5XKE5 535 aa13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 PHLDB3Q6NSJ2 640 aa13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 C1orf186Q6ZWK4 172 aa13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 UROC1Q96N76 676 aa13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 PNMA5Q96PV4 448 aa13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 PLA2G2FQ9BZM2 168 aa13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 TMEM134Q9H6X4 195 aa13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 ANKFY1Q9P2R3 1169 aa13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 DNM3Q9UQ16 869 aa13.26□□□□□ -0.29
SOX2-OT-228ENST00000597828 NPHP3-ACAD11A0A0J9YXS1 232 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 RHOP08100 348 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 CD72P21854 359 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 SPAG1Q07617 926 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 MLF2Q15773 248 aaPredicted RBP13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 MPZL3Q6UWV2 235 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 ANKS3Q6ZW76 656 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 MTSS1LQ765P7 747 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 MCRS1Q96EZ8 462 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 DRC1Q96MC2 740 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 RAB34Q9BZG1 259 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 HAPLN2Q9GZV7 340 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 TOPORSQ9NS56 1045 aaPredicted RBP13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 CNTN3Q9P232 1028 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 TUBGCP4Q9UGJ1 667 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 SIT1Q9Y3P8 196 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 MTF2Q9Y483 593 aaPredicted RBP13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 BACE2Q9Y5Z0 518 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 ZFP37Q9Y6Q3 630 aaPredicted RBP13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 EP300Q09472 2414 aaPredicted RBP13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 F5P12259 2224 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 SPAG17Q6Q759 2223 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 FRYLO94915 3013 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 PTPRDP23468 1912 aa13.25□□□□□ -0.29
SOX2-OT-228ENST00000597828 DNAH14Q0VDD8 3507 aa13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 EIF5BO60841 1220 aaKnown RBP13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 CD2BP2O95400 341 aaKnown RBP13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 SEC24AO95486 1093 aa13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 POU2F2P09086 479 aa13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 MCF2P10911 925 aa13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 PRPHP41219 470 aa13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 STARD6P59095 220 aa13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 UVSSAQ2YD98 709 aa13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 MCTP1Q6DN14 999 aa13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 DTHD1Q6ZMT9 781 aa13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 APBB1IPQ7Z5R6 666 aaPredicted RBP13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 LRRC15Q8TF66 581 aa13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 TCEAL4Q96EI5 215 aa13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 ACAP3Q96P50 834 aa13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 TCHPQ9BT92 498 aa13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 MRPS23Q9Y3D9 190 aaKnown RBP13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 ZNF292O60281 2723 aa13.24□□□□□ -0.29
SOX2-OT-228ENST00000597828 NCANO14594 1321 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 VWA3AA6NCI4 1184 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 LAD1O00515 517 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 PRRG1O14668 218 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 TRAPPC3O43617 180 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 TBC1D4O60343 1298 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 ABLIM3O94929 683 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 LRG1P02750 347 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 SP9P0CG40 484 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 CXCL8P10145 99 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 KCNE1P15382 129 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 MCM4P33991 863 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 CCR2P41597 374 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 SLC12A3P55017 1021 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 ATP2C1P98194 919 aaPredicted RBP13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 NOLC1Q14978 699 aaKnown RBP eCLIP13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 UBXN2BQ14CS0 331 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 SLC10A6Q3KNW5 377 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 SLC8B1Q6J4K2 584 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 MAML2Q8IZL2 1156 aaPredicted RBP13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 HS6ST3Q8IZP7 471 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 DDX23Q9BUQ8 820 aaKnown RBP13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 CYP4F11Q9HBI6 524 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 SLC38A7Q9NVC3 462 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 FBXL5Q9UKA1 691 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 NUB1Q9Y5A7 615 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 INSL5Q9Y5Q6 135 aa13.23□□□□□ -0.29
SOX2-OT-228ENST00000597828 WDR87Q6ZQQ6 2873 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 KANSL1LA0AUZ9 987 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 ARHGEF37A1IGU5 675 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 MAPTP10636 758 aaKnown RBP13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 FCARP24071 287 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 GUCY2CP25092 1073 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 TARSP26639 723 aaKnown RBP13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 TNFSF9P41273 254 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 GUCY2FP51841 1108 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 GRM2Q14416 872 aa13.22□□□□□ -0.29
SOX2-OT-228ENST00000597828 SLC44A4Q53GD3 710 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms