RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 MICAL2O94851 1124 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 SEC24AO95486 1093 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 LRG1P02750 347 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 OR52Z1P0C646 297 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 ATF2P15336 505 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 PTPN2P17706 415 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 MUTP22033 750 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 CCR2P41597 374 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 ATXN1P54253 815 aaKnown RBP10.95□□□□□ -0.66
LIG1-209ENST00000596104 MTAPQ13126 283 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 TRIM29Q14134 588 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 MRPL58Q14197 206 aaKnown RBP10.95□□□□□ -0.66
LIG1-209ENST00000596104 FAM78AQ5JUQ0 283 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 MAMSTRQ6ZN01 415 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 TCEAL8Q8IYN2 117 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 ERMNQ8TAM6 284 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 KIFAP3Q92845 792 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 IFT74Q96LB3 600 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 ASB16Q96NS5 453 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 CORO1BQ9BR76 489 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 CHRDQ9H2X0 955 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 PTPRHQ9HD43 1115 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 NOTCH4Q99466 2003 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 VWA8A3KMH1 1905 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 EPG5Q9HCE0 2579 aa10.95□□□□□ -0.66
LIG1-209ENST00000596104 MYH15Q9Y2K3 1946 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 K7ERI5 159 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 PODXLO00592 558 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 ABLIM1O14639 778 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 PRRG1O14668 218 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 SYN3O14994 580 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 MEFVO15553 781 aaPredicted RBP10.94□□□□□ -0.66
LIG1-209ENST00000596104 MOSPD3O75425 235 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 KCNE1P15382 129 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 SDHBP21912 280 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 ELF1P32519 619 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 GUCY1B3Q02153 619 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 LMNB2Q03252 620 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 ORC2Q13416 577 aaPredicted RBP10.94□□□□□ -0.66
LIG1-209ENST00000596104 GRM2Q14416 872 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 ZNF174Q15697 407 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 TAS1R3Q7RTX0 852 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 APBB1IPQ7Z5R6 666 aaPredicted RBP10.94□□□□□ -0.66
LIG1-209ENST00000596104 MAP4K3Q8IVH8 894 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 DAW1Q8N136 415 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 ACO2Q99798 780 aaKnown RBP10.94□□□□□ -0.66
LIG1-209ENST00000596104 CCDC94Q9BW85 323 aaPredicted RBP10.94□□□□□ -0.66
LIG1-209ENST00000596104 FAM126AQ9BYI3 521 aaPredicted RBP10.94□□□□□ -0.66
LIG1-209ENST00000596104 BHMT2Q9H2M3 363 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 BRD9Q9H8M2 597 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 CYP4F11Q9HBI6 524 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 ZFP14Q9HCL3 533 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 PARD6AQ9NPB6 346 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 TRPV5Q9NQA5 729 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 TOPORSQ9NS56 1045 aaPredicted RBP10.94□□□□□ -0.66
LIG1-209ENST00000596104 SLC38A7Q9NVC3 462 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 FBXL5Q9UKA1 691 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 INSL5Q9Y5Q6 135 aa10.94□□□□□ -0.66
LIG1-209ENST00000596104 NCANO14594 1321 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 PHLPP2Q6ZVD8 1323 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 SPTBN2O15020 2390 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 TPRP12270 2363 aaKnown RBP10.93□□□□□ -0.66
LIG1-209ENST00000596104 PRR5-ARHGAP8B1AHC4 643 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 MAN2B1O00754 1011 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 ZNF197O14709 1029 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 PROZP22891 400 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 NPTX2P47972 431 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 YARSP54577 528 aaKnown RBP10.93□□□□□ -0.66
LIG1-209ENST00000596104 EPHA5P54756 1037 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 ARPP19P56211 112 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 OSTNP61366 133 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 ARHGAP8P85298 464 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 ZNF568Q3ZCX4 644 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 TPGS2Q68CL5 300 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 HAUS3Q68CZ6 603 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 VITQ6UXI7 678 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 HS6ST3Q8IZP7 471 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 C4orf32Q8N8J7 132 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 SMARCD2Q92925 531 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 SECISBP2LQ93073 1101 aaKnown RBP10.93□□□□□ -0.66
LIG1-209ENST00000596104 SUSD3Q96L08 255 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 ZSWIM3Q96MP5 696 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 CNTNAP3BQ96NU0 1288 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 IER2Q9BTL4 223 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 TRMT61BQ9BVS5 477 aaKnown RBP10.93□□□□□ -0.66
LIG1-209ENST00000596104 TARS2Q9BW92 718 aaKnown RBP10.93□□□□□ -0.66
LIG1-209ENST00000596104 CNTNAP3Q9BZ76 1288 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 TMEM134Q9H6X4 195 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 TRPV4Q9HBA0 871 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 ZNF334Q9HCZ1 680 aaPredicted RBP10.93□□□□□ -0.66
LIG1-209ENST00000596104 CEP72Q9P209 647 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 CNTN3Q9P232 1028 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 ARHGAP28Q9P2N2 729 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 NDRG2Q9UN36 371 aaKnown RBP10.93□□□□□ -0.66
LIG1-209ENST00000596104 F5P12259 2224 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 PATJQ8NI35 1801 aa10.93□□□□□ -0.66
LIG1-209ENST00000596104 H7C4K7 107 aa10.92□□□□□ -0.66
LIG1-209ENST00000596104 ARNTLO00327 626 aa10.92□□□□□ -0.66
LIG1-209ENST00000596104 MCF2P10911 925 aa10.92□□□□□ -0.66
LIG1-209ENST00000596104 GDI1P31150 447 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms