RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 MRPL58Q14197 206 aaKnown RBP11.7□□□□□ -0.54
USE1-203ENST00000593597 PDIA5Q14554 519 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 MLF2Q15773 248 aaPredicted RBP11.7□□□□□ -0.54
USE1-203ENST00000593597 PABPC1LQ4VXU2 614 aaKnown RBP11.7□□□□□ -0.54
USE1-203ENST00000593597 SEZ6Q53EL9 994 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 PRSS36Q5K4E3 855 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 VARS2Q5ST30 1063 aaKnown RBP11.7□□□□□ -0.54
USE1-203ENST00000593597 TCEAL4Q96EI5 215 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 UROC1Q96N76 676 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 TMEM134Q9H6X4 195 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 CNTN3Q9P232 1028 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 SIT1Q9Y3P8 196 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 SCN1AP35498 2009 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 DENND4CQ5VZ89 1909 aa11.7□□□□□ -0.54
USE1-203ENST00000593597 TCHHQ07283 1943 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 CCDC169A6NNP5 214 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 SFI1A8K8P3 1242 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 SLC16A4O15374 487 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 XYLBO75191 536 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 MOSPD3O75425 235 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 VNN2O95498 520 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 HMGN5P82970 282 aaKnown RBP11.69□□□□□ -0.54
USE1-203ENST00000593597 FZD5Q13467 585 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 UVSSAQ2YD98 709 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 SLC10A6Q3KNW5 377 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 C8orf34Q49A92 452 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 HYIQ5T013 277 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 TANGO2Q6ICL3 276 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 PDXDC1Q6P996 788 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 C1orf210Q8IVY1 113 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 ZNF687Q8N1G0 1237 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 MCRS1Q96EZ8 462 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 MRPL4Q9BYD3 311 aaKnown RBP11.69□□□□□ -0.54
USE1-203ENST00000593597 LTB4R2Q9NPC1 389 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 TUBGCP4Q9UGJ1 667 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 FBXL5Q9UKA1 691 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 KCNH3Q9ULD8 1083 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 NCOR2Q9Y618 2525 aa11.69□□□□□ -0.54
USE1-203ENST00000593597 NPHP3-ACAD11A0A0J9YXS1 232 aa11.68□□□□□ -0.54
USE1-203ENST00000593597 KANSL1LA0AUZ9 987 aa11.68□□□□□ -0.54
USE1-203ENST00000593597 CD2BP2O95400 341 aaKnown RBP11.68□□□□□ -0.54
USE1-203ENST00000593597 NEFLP07196 543 aa11.68□□□□□ -0.54
USE1-203ENST00000593597 MCF2P10911 925 aa11.68□□□□□ -0.54
USE1-203ENST00000593597 HARSP12081 509 aaKnown RBP11.68□□□□□ -0.54
USE1-203ENST00000593597 RFX1P22670 979 aa11.68□□□□□ -0.54
USE1-203ENST00000593597 TARSP26639 723 aaKnown RBP11.68□□□□□ -0.54
USE1-203ENST00000593597 CACNB1Q02641 598 aaPredicted RBP11.68□□□□□ -0.54
USE1-203ENST00000593597 RAD51AP2Q09MP3 1159 aa11.68□□□□□ -0.54
USE1-203ENST00000593597 SLC44A4Q53GD3 710 aa11.68□□□□□ -0.54
USE1-203ENST00000593597 MPZL3Q6UWV2 235 aa11.68□□□□□ -0.54
USE1-203ENST00000593597 ANKS3Q6ZW76 656 aa11.68□□□□□ -0.54
USE1-203ENST00000593597 MTSS1LQ765P7 747 aa11.68□□□□□ -0.54
USE1-203ENST00000593597 HS6ST3Q8IZP7 471 aa11.68□□□□□ -0.54
USE1-203ENST00000593597 SUMF1Q8NBK3 374 aa11.68□□□□□ -0.54
USE1-203ENST00000593597 TMEM161BQ8NDZ6 487 aa11.68□□□□□ -0.54
USE1-203ENST00000593597 ZNF461Q8TAF7 563 aa11.68□□□□□ -0.54
USE1-203ENST00000593597 CCDC94Q9BW85 323 aaPredicted RBP11.68□□□□□ -0.54
USE1-203ENST00000593597 KMT5AQ9NQR1 393 aa11.68□□□□□ -0.54
USE1-203ENST00000593597 AVENQ9NQS1 362 aaPredicted RBP11.68□□□□□ -0.54
USE1-203ENST00000593597 NOL7Q9UMY1 257 aaKnown RBP11.68□□□□□ -0.54
USE1-203ENST00000593597 FAM189A1O60320 539 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 ECI2O75521 394 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 LMNAP02545 664 aaKnown RBP11.67□□□□□ -0.54
USE1-203ENST00000593597 CXCL8P10145 99 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 MAPTP10636 758 aaKnown RBP11.67□□□□□ -0.54
USE1-203ENST00000593597 ATF2P15336 505 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 GUCY2CP25092 1073 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 PRPHP41219 470 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 GUCY2FP51841 1108 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 ATP2C1P98194 919 aaPredicted RBP11.67□□□□□ -0.54
USE1-203ENST00000593597 PRKCQQ04759 706 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 SPAG1Q07617 926 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 DMP1Q13316 513 aaPredicted RBP11.67□□□□□ -0.54
USE1-203ENST00000593597 ARSHQ5FYA8 562 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 ZBTB41Q5SVQ8 909 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 TPRG1Q6ZUI0 275 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 DCLK2Q8N568 766 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 FAM184AQ8NB25 1140 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 RMDN1Q96DB5 314 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 SUSD3Q96L08 255 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 ZSCAN31Q96LW9 406 aaPredicted RBP11.67□□□□□ -0.54
USE1-203ENST00000593597 ZSWIM3Q96MP5 696 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 PLIN2Q99541 437 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 NTPCRQ9BSD7 190 aaKnown RBP11.67□□□□□ -0.54
USE1-203ENST00000593597 CRISPLD1Q9H336 500 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 SH2B1Q9NRF2 756 aaPredicted RBP11.67□□□□□ -0.54
USE1-203ENST00000593597 CEP72Q9P209 647 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 DNM3Q9UQ16 869 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 MRPS23Q9Y3D9 190 aaKnown RBP11.67□□□□□ -0.54
USE1-203ENST00000593597 INSL5Q9Y5Q6 135 aa11.67□□□□□ -0.54
USE1-203ENST00000593597 PPEF2O14830 753 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 SYN3O14994 580 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 GJA1P17302 382 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 TNFSF9P41273 254 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 ID4P47928 161 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 YARSP54577 528 aaKnown RBP11.66□□□□□ -0.54
USE1-203ENST00000593597 SLC12A3P55017 1021 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 ARPP19P56211 112 aa11.66□□□□□ -0.54
USE1-203ENST00000593597 GNL2Q13823 731 aaKnown RBP11.66□□□□□ -0.54
USE1-203ENST00000593597 GRM2Q14416 872 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms