RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 NOD1Q9Y239 953 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 TANC1Q9C0D5 1861 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 PTPRSQ13332 1948 aa14.56□□□□□ -0.08
VMP1-217ENST00000593168 IL18RAPO95256 599 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 CHRNA1P02708 482 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 C4BPAP04003 597 aaKnown RBP14.55□□□□□ -0.08
VMP1-217ENST00000593168 STAG3L1P0CL83 205 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 UCHL3P15374 230 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 ATP2A2P16615 1042 aaKnown RBP14.55□□□□□ -0.08
VMP1-217ENST00000593168 TNNI1P19237 187 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 FGFR4P22455 802 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 THPOP40225 353 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 TNFSF9P41273 254 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 KCNJ6P48051 423 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 TRIM71Q2Q1W2 868 aaKnown RBP14.55□□□□□ -0.08
VMP1-217ENST00000593168 SEZ6Q53EL9 994 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 FAM26DQ5JW98 314 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 SLC27A1Q6PCB7 646 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 TMTC1Q8IUR5 882 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 WDR49Q8IV35 697 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 CEP120Q8N960 986 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 KIAA1524Q8TCG1 905 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 ZNF516Q92618 1163 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 SYN2Q92777 582 aaPredicted RBP14.55□□□□□ -0.08
VMP1-217ENST00000593168 INTS2Q9H0H0 1204 aaKnown RBP14.55□□□□□ -0.08
VMP1-217ENST00000593168 RPF1Q9H9Y2 349 aaKnown RBP14.55□□□□□ -0.08
VMP1-217ENST00000593168 CERS4Q9HA82 394 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 TRMT13Q9NUP7 481 aaKnown RBP14.55□□□□□ -0.08
VMP1-217ENST00000593168 MYO6Q9UM54 1294 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 PLAGL2Q9UPG8 496 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 MTCH2Q9Y6C9 303 aa14.55□□□□□ -0.08
VMP1-217ENST00000593168 PRRC2BQ5JSZ5 2229 aaKnown RBP14.55□□□□□ -0.08
VMP1-217ENST00000593168 COL4A4P53420 1690 aaPredicted RBP14.55□□□□□ -0.08
VMP1-217ENST00000593168 EPOPA6NHQ4 379 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 ESPNB1AK53 854 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 ARHGAP6O43182 974 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 CA3P07451 260 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 ACTN1P12814 892 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 RFX1P22670 979 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 MSNP26038 577 aaKnown RBP14.54□□□□□ -0.08
VMP1-217ENST00000593168 GRM5P41594 1212 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 WNT7BP56706 349 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 POLR2FP61218 127 aaKnown RBP14.54□□□□□ -0.08
VMP1-217ENST00000593168 CDK17Q00537 523 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 SKIV2LQ15477 1246 aaKnown RBP14.54□□□□□ -0.08
VMP1-217ENST00000593168 ENOX2Q16206 610 aaKnown RBP14.54□□□□□ -0.08
VMP1-217ENST00000593168 MEA1Q16626 185 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 ZACNQ401N2 412 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 PDXDC1Q6P996 788 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 DEFB128Q7Z7B8 93 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 FAM228AQ86W67 206 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 CD302Q8IX05 232 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 FBXL13Q8NEE6 735 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 DHX38Q92620 1227 aaKnown RBP14.54□□□□□ -0.08
VMP1-217ENST00000593168 C1QTNF1Q9BXJ1 281 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 ASB7Q9H672 318 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 TOPORSQ9NS56 1045 aaPredicted RBP14.54□□□□□ -0.08
VMP1-217ENST00000593168 ZNHIT6Q9NWK9 470 aaKnown RBP14.54□□□□□ -0.08
VMP1-217ENST00000593168 APEX2Q9UBZ4 518 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 NOC2LQ9Y3T9 749 aaKnown RBP14.54□□□□□ -0.08
VMP1-217ENST00000593168 SQORQ9Y6N5 450 aa14.54□□□□□ -0.08
VMP1-217ENST00000593168 GPR182O15218 404 aa14.53□□□□□ -0.08
VMP1-217ENST00000593168 ZC3H11AO75152 810 aaKnown RBP eCLIP14.53□□□□□ -0.08
VMP1-217ENST00000593168 RPS6KA5O75582 802 aa14.53□□□□□ -0.08
VMP1-217ENST00000593168 ARHGEF15O94989 841 aa14.53□□□□□ -0.08
VMP1-217ENST00000593168 POU3F3P20264 500 aaPredicted RBP14.53□□□□□ -0.08
VMP1-217ENST00000593168 AAK1Q2M2I8 961 aa14.53□□□□□ -0.08
VMP1-217ENST00000593168 CYP26C1Q6V0L0 522 aa14.53□□□□□ -0.08
VMP1-217ENST00000593168 RRAGAQ7L523 313 aa14.53□□□□□ -0.08
VMP1-217ENST00000593168 TAS1R2Q8TE23 839 aa14.53□□□□□ -0.08
VMP1-217ENST00000593168 ACAP3Q96P50 834 aa14.53□□□□□ -0.08
VMP1-217ENST00000593168 CCDC94Q9BW85 323 aaPredicted RBP14.53□□□□□ -0.08
VMP1-217ENST00000593168 NLRC4Q9NPP4 1024 aa14.53□□□□□ -0.08
VMP1-217ENST00000593168 CHST12Q9NRB3 414 aa14.53□□□□□ -0.08
VMP1-217ENST00000593168 RAB20Q9NX57 234 aa14.53□□□□□ -0.08
VMP1-217ENST00000593168 PYCARDQ9ULZ3 195 aa14.53□□□□□ -0.08
VMP1-217ENST00000593168 ST3GAL5Q9UNP4 418 aa14.53□□□□□ -0.08
VMP1-217ENST00000593168 LRRC53A6NM62 1247 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 NPTXRO95502 500 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 CTSHP09668 335 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 CXCL8P10145 99 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 OSTNP61366 133 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 APBA1Q02410 837 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 DUOXA2Q1HG44 320 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 SLC10A6Q3KNW5 377 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 FBXO47Q5MNV8 452 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 IQCEQ6IPM2 695 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 PHLDB3Q6NSJ2 640 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 WDR59Q6PJI9 974 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 NT5DC4Q86YG4 428 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 SEMA4DQ92854 862 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 FAM81BQ96LP2 452 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 STK33Q9BYT3 514 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 EPHX3Q9H6B9 360 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 PLEKHA5Q9HAU0 1116 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 AIPL1Q9NZN9 384 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 DNAJC12Q9UKB3 198 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 PIN4Q9Y237 131 aaKnown RBP14.52□□□□□ -0.09
VMP1-217ENST00000593168 FHOD1Q9Y613 1164 aa14.52□□□□□ -0.09
VMP1-217ENST00000593168 PTPRJQ12913 1337 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms