RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ZC3H11AO75152 810 aaKnown RBP eCLIP10.46□□□□□ -0.73
DDX39A-220ENST00000593008 OFD1O75665 1012 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 POMCP01189 267 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 CLTAP09496 248 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 DLATP10515 647 aaKnown RBP10.46□□□□□ -0.73
DDX39A-220ENST00000593008 ZNF18P17022 549 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 KCNA5P22460 613 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 ABCD1P33897 745 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 GTF2F1P35269 517 aaKnown RBP eCLIP10.46□□□□□ -0.736e-8■■■■■ 29.9
DDX39A-220ENST00000593008 FKBP3Q00688 224 aaKnown RBP10.46□□□□□ -0.73
DDX39A-220ENST00000593008 RNASELQ05823 741 aaKnown RBP10.46□□□□□ -0.73
DDX39A-220ENST00000593008 PPP3CAQ08209 521 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 KCNJ12Q14500 433 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 PCBP1Q15365 356 aaKnown RBP eCLIP10.46□□□□□ -0.73
DDX39A-220ENST00000593008 NFIL3Q16649 462 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 DCAF17Q5H9S7 520 aaPredicted RBP10.46□□□□□ -0.73
DDX39A-220ENST00000593008 NOMO2Q5JPE7 1267 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 SLFN12LQ6IEE8 588 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 KCNT2Q6UVM3 1135 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 APTXQ7Z2E3 356 aaKnown RBP10.46□□□□□ -0.73
DDX39A-220ENST00000593008 ADGRD2Q7Z7M1 963 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 SLC9A9Q8IVB4 645 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 MICAL1Q8TDZ2 1067 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 ATXN2LQ8WWM7 1075 aaKnown RBP10.46□□□□□ -0.73
DDX39A-220ENST00000593008 ZNF516Q92618 1163 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 PGBD4Q96DM1 585 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 ZNF558Q96NG5 402 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 ACAP3Q96P50 834 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 BPIFA3Q9BQP9 254 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 PAAF1Q9BRP4 392 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 CCDC94Q9BW85 323 aaPredicted RBP10.46□□□□□ -0.73
DDX39A-220ENST00000593008 COL25A1Q9BXS0 654 aaPredicted RBP10.46□□□□□ -0.73
DDX39A-220ENST00000593008 RSAD1Q9HA92 442 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 TBC1D13Q9NVG8 400 aa10.46□□□□□ -0.73
DDX39A-220ENST00000593008 MYO7AQ13402 2215 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 TTC26A0AVF1 554 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 H3BQ06 376 aaPredicted RBP10.45□□□□□ -0.74
DDX39A-220ENST00000593008 SLC16A3O15427 465 aaKnown RBP10.45□□□□□ -0.74
DDX39A-220ENST00000593008 SCP2P22307 547 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 PPP1R2P41236 205 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 GCLMP48507 274 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 BCAR1P56945 870 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 ERVFC1P60507 584 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 APBA1Q02410 837 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 HYAL1Q12794 435 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 KRT31Q15323 416 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 NAB2Q15742 525 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 TPD52L1Q16890 204 aaPredicted RBP10.45□□□□□ -0.74
DDX39A-220ENST00000593008 CCDC40Q4G0X9 1142 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 TJAP1Q5JTD0 557 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 RBM23Q86U06 439 aaKnown RBP10.45□□□□□ -0.74
DDX39A-220ENST00000593008 TMEM173Q86WV6 379 aaPredicted RBP10.45□□□□□ -0.74
DDX39A-220ENST00000593008 ZNF280BQ86YH2 543 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 URGCPQ8TCY9 931 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 MFSD14AQ96MC6 490 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 MRPL9Q9BYD2 267 aaKnown RBP10.45□□□□□ -0.74
DDX39A-220ENST00000593008 GTPBP4Q9BZE4 634 aaKnown RBP10.45□□□□□ -0.74
DDX39A-220ENST00000593008 MTMR12Q9C0I1 747 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 LMAN2LQ9H0V9 348 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 UBE2ZQ9H832 354 aaPredicted RBP10.45□□□□□ -0.74
DDX39A-220ENST00000593008 RPF1Q9H9Y2 349 aaKnown RBP10.45□□□□□ -0.74
DDX39A-220ENST00000593008 CLDND1Q9NY35 253 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 DNAJB4Q9UDY4 337 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 COG5Q9UP83 839 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 TRIP11Q15643 1979 aa10.45□□□□□ -0.74
DDX39A-220ENST00000593008 PDCD11Q14690 1871 aaKnown RBP10.44□□□□□ -0.74
DDX39A-220ENST00000593008 NLRC5Q86WI3 1866 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 SMIM28A0A1B0GU29 152 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 CASTOR2A6NHX0 329 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 ZNF233A6NK53 670 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 IKBKBO14920 756 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 PER2O15055 1255 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 LINC01565O15544 149 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 DDHD2O94830 711 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 EPB41P11171 864 aaKnown RBP10.44□□□□□ -0.74
DDX39A-220ENST00000593008 RPL13P26373 211 aaKnown RBP10.44□□□□□ -0.74
DDX39A-220ENST00000593008 PSMC2P35998 433 aaKnown RBP10.44□□□□□ -0.74
DDX39A-220ENST00000593008 NRIP1P48552 1158 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 ALDH7A1P49419 539 aaKnown RBP10.44□□□□□ -0.74
DDX39A-220ENST00000593008 KLK7P49862 253 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 SNRPFP62306 86 aaKnown RBP10.44□□□□□ -0.74
DDX39A-220ENST00000593008 TFAMQ00059 246 aaKnown RBP10.44□□□□□ -0.74
DDX39A-220ENST00000593008 PPP2R3AQ06190 1150 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 BFSP1Q12934 665 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 PSMD6Q15008 389 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 CLUL1Q15846 466 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 CBWD6Q4V339 395 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 CBWD3Q5JTY5 395 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 MIIPQ5JXC2 388 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 CBWD5Q5RIA9 395 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 TCERG1LQ5VWI1 586 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 PLPP4Q5VZY2 271 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 ALKAL1Q6UXT8 129 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 FILIP1Q7Z7B0 1213 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 TRIM59Q8IWR1 403 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 SLC39A11Q8N1S5 342 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 ADAMTS19Q8TE59 1207 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 BCL7CQ8WUZ0 217 aaPredicted RBP10.44□□□□□ -0.74
DDX39A-220ENST00000593008 SLC35C1Q96A29 364 aa10.44□□□□□ -0.74
DDX39A-220ENST00000593008 KIF12Q96FN5 646 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms